Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00907

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
1,003,154	+		MIT1002_00905	0.86	+2.9
1,003,173	-		MIT1002_00905	0.87	+1.0
1,003,228	+				-0.7
1,003,253	-				+0.5
1,003,342	-				+0.9
1,003,352	+				+1.9
1,003,360	-				-1.3
1,003,360	-				-0.9
1,003,421	+				+1.7
1,003,421	+				+1.4
1,003,429	-				+0.7
1,003,467	-				-0.0
1,003,545	+		MIT1002_00906	0.19	-2.3
1,003,545	+		MIT1002_00906	0.19	+1.6
1,003,553	-		MIT1002_00906	0.20	+0.3
1,003,563	+		MIT1002_00906	0.22	-3.5
1,003,569	+		MIT1002_00906	0.23	-0.5
1,003,593	-		MIT1002_00906	0.27	+0.7
1,003,615	+		MIT1002_00906	0.31	-1.1
1,003,685	-		MIT1002_00906	0.44	-3.7
1,003,686	-		MIT1002_00906	0.44	-0.9
1,003,686	-		MIT1002_00906	0.44	+1.2
1,003,738	+		MIT1002_00906	0.53	-0.1
1,003,746	-		MIT1002_00906	0.55	+1.7
1,003,837	-		MIT1002_00906	0.71	-1.5
1,003,941	-		MIT1002_00906	0.90	+0.1
1,004,080	+				+0.2
1,004,082	+				+0.2
1,004,082	+				+1.2
1,004,088	+				-1.1
1,004,096	-				+0.6
1,004,137	+				+1.5
1,004,159	-				+0.5
1,004,176	-				+1.5
1,004,194	-		MIT1002_00907	0.11	+0.4
1,004,215	-		MIT1002_00907	0.14	-0.7
1,004,261	+		MIT1002_00907	0.20	+0.3
1,004,261	+		MIT1002_00907	0.20	-0.4
1,004,271	-		MIT1002_00907	0.21	+1.6
1,004,294	-		MIT1002_00907	0.24	+0.8
1,004,310	+		MIT1002_00907	0.26	-0.5
1,004,318	-		MIT1002_00907	0.27	+0.8
1,004,329	-		MIT1002_00907	0.29	+0.1
1,004,371	+		MIT1002_00907	0.34	-2.7
1,004,379	-		MIT1002_00907	0.35	-0.5
1,004,479	+		MIT1002_00907	0.48	-3.3
1,004,518	-		MIT1002_00907	0.53	-3.0
1,004,576	-		MIT1002_00907	0.61	+0.9
1,004,592	+		MIT1002_00907	0.63	+0.8
1,004,623	-		MIT1002_00907	0.67	-0.3
1,004,727	+		MIT1002_00907	0.81	-0.2
1,004,727	+		MIT1002_00907	0.81	-2.6
1,004,786	-		MIT1002_00907	0.88	+0.7
1,004,820	+				-0.2
1,004,843	-				+0.3
1,004,903	+				+1.0
1,004,908	+				-0.9
1,004,911	-				+0.7
1,004,924	+				+0.3
1,004,943	+				-0.2
1,004,943	+				-3.0
1,004,951	-				+0.1
1,004,951	-				+0.6
1,004,951	-				-2.0