Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05963

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
110,300	+		MPMX19_05962	0.32	-0.2
110,300	+		MPMX19_05962	0.32	+1.1
110,301	-		MPMX19_05962	0.32	+0.0
110,301	-		MPMX19_05962	0.32	+0.1
110,384	+		MPMX19_05962	0.38	+0.7
110,384	+		MPMX19_05962	0.38	-0.9
110,659	+		MPMX19_05962	0.59	+0.1
110,659	+		MPMX19_05962	0.59	-1.0
110,659	+		MPMX19_05962	0.59	-0.1
110,659	+		MPMX19_05962	0.59	-0.0
110,659	+		MPMX19_05962	0.59	-0.3
110,659	+		MPMX19_05962	0.59	-1.5
110,659	+		MPMX19_05962	0.59	-0.9
110,659	+		MPMX19_05962	0.59	-1.5
110,660	-		MPMX19_05962	0.59	+1.5
110,660	-		MPMX19_05962	0.59	-0.6
110,660	-		MPMX19_05962	0.59	+0.3
110,660	-		MPMX19_05962	0.59	+0.5
110,660	-		MPMX19_05962	0.59	-0.1
110,660	-		MPMX19_05962	0.59	+0.7
110,660	-		MPMX19_05962	0.59	-0.7
110,660	-		MPMX19_05962	0.59	-0.8
110,660	-		MPMX19_05962	0.59	+1.0
110,660	-		MPMX19_05962	0.59	-2.0
110,873	+		MPMX19_05962	0.75	-2.3
110,873	+		MPMX19_05962	0.75	+2.2
110,873	+		MPMX19_05962	0.75	-0.6
110,874	-		MPMX19_05962	0.75	-0.8
110,969	+		MPMX19_05962	0.82	+0.4
111,044	+		MPMX19_05962	0.87	-0.6
111,045	-		MPMX19_05962	0.88	+0.8
111,050	+		MPMX19_05962	0.88	+0.5
111,050	+		MPMX19_05962	0.88	+0.5
111,050	+		MPMX19_05962	0.88	-0.5
111,050	+		MPMX19_05962	0.88	+1.5
111,050	+		MPMX19_05962	0.88	+0.3
111,050	+		MPMX19_05962	0.88	+0.2
111,050	+		MPMX19_05962	0.88	-0.1
111,050	+		MPMX19_05962	0.88	-0.4
111,051	-		MPMX19_05962	0.88	-1.8
111,051	-		MPMX19_05962	0.88	-0.3
111,051	-		MPMX19_05962	0.88	+0.0
111,122	+				-0.0
111,122	+				-0.6
111,122	+				-1.0
111,122	+				+1.1
111,122	+				+0.1
111,122	+				+0.6
111,122	+				-0.2
111,123	-				-0.2
111,123	-				-0.3
111,123	-				-0.5
111,123	-				-2.5
111,125	+				+0.9
111,126	-				+0.7
111,126	-				+0.2
111,217	+				+0.1
111,217	+				-0.6
111,217	+				-0.2
111,573	+		MPMX19_05963	0.19	-0.8
111,573	+		MPMX19_05963	0.19	-1.2
111,573	+		MPMX19_05963	0.19	-0.6
111,573	+		MPMX19_05963	0.19	-0.3
111,573	+		MPMX19_05963	0.19	-0.0
111,573	+		MPMX19_05963	0.19	-1.8
111,573	+		MPMX19_05963	0.19	-0.4
111,573	+		MPMX19_05963	0.19	-3.0
111,573	+		MPMX19_05963	0.19	-2.3
111,574	-		MPMX19_05963	0.19	-1.3
111,574	-		MPMX19_05963	0.19	-1.6
111,574	-		MPMX19_05963	0.19	-0.3
111,574	-		MPMX19_05963	0.19	+0.2
111,730	+		MPMX19_05963	0.27	-0.3
111,730	+		MPMX19_05963	0.27	+0.7
111,730	+		MPMX19_05963	0.27	-1.3
111,730	+		MPMX19_05963	0.27	-1.5
111,730	+		MPMX19_05963	0.27	+0.8
111,730	+		MPMX19_05963	0.27	+1.4
111,731	-		MPMX19_05963	0.27	+0.4
111,731	-		MPMX19_05963	0.27	-1.5
111,763	+		MPMX19_05963	0.29	-2.2
111,763	+		MPMX19_05963	0.29	-0.5
111,763	+		MPMX19_05963	0.29	-1.2
111,763	+		MPMX19_05963	0.29	+0.1
111,763	+		MPMX19_05963	0.29	-0.3
111,764	-		MPMX19_05963	0.29	-0.2
111,764	-		MPMX19_05963	0.29	-0.3
111,764	-		MPMX19_05963	0.29	-0.0
111,764	-		MPMX19_05963	0.29	-0.5
111,764	-		MPMX19_05963	0.29	+0.1
111,764	-		MPMX19_05963	0.29	-0.8
111,764	-		MPMX19_05963	0.29	+1.4
111,764	-		MPMX19_05963	0.29	+0.9
111,764	-		MPMX19_05963	0.29	+0.2
111,775	+		MPMX19_05963	0.30	+1.0
111,775	+		MPMX19_05963	0.30	+0.5
111,776	-		MPMX19_05963	0.30	-0.3
111,776	-		MPMX19_05963	0.30	-0.8
111,856	+		MPMX19_05963	0.34	-0.3
111,856	+		MPMX19_05963	0.34	-0.2
111,856	+		MPMX19_05963	0.34	-0.1
111,856	+		MPMX19_05963	0.34	-0.2
111,856	+		MPMX19_05963	0.34	+0.8
111,857	-		MPMX19_05963	0.34	-0.6
111,857	-		MPMX19_05963	0.34	+0.7
111,857	-		MPMX19_05963	0.34	-1.2
111,857	-		MPMX19_05963	0.34	-1.9
111,857	-		MPMX19_05963	0.34	+1.4
111,857	-		MPMX19_05963	0.34	+1.5
111,857	-		MPMX19_05963	0.34	-0.3
112,129	+		MPMX19_05963	0.48	-0.9
112,129	+		MPMX19_05963	0.48	-0.8
112,129	+		MPMX19_05963	0.48	-0.9
112,130	-		MPMX19_05963	0.48	-0.5
112,130	-		MPMX19_05963	0.48	-0.9
112,130	-		MPMX19_05963	0.48	-0.9
112,378	+		MPMX19_05963	0.61	+0.2
112,379	-		MPMX19_05963	0.62	-0.3
112,379	-		MPMX19_05963	0.62	+0.6
112,379	-		MPMX19_05963	0.62	-0.0
112,483	+		MPMX19_05963	0.67	-0.4
112,483	+		MPMX19_05963	0.67	-0.8
112,483	+		MPMX19_05963	0.67	+1.9
112,484	-		MPMX19_05963	0.67	+0.1
112,484	-		MPMX19_05963	0.67	+0.5
112,484	-		MPMX19_05963	0.67	-1.5
112,648	+		MPMX19_05963	0.76	-0.3
112,648	+		MPMX19_05963	0.76	+0.1
112,757	+		MPMX19_05963	0.82	+1.1
112,757	+		MPMX19_05963	0.82	+2.8
112,757	+		MPMX19_05963	0.82	-1.2
112,757	+		MPMX19_05963	0.82	+0.2
112,757	+		MPMX19_05963	0.82	-0.7
112,757	+		MPMX19_05963	0.82	-1.0
112,757	+		MPMX19_05963	0.82	-1.5
112,757	+		MPMX19_05963	0.82	+0.5
112,757	+		MPMX19_05963	0.82	+0.8
112,758	-		MPMX19_05963	0.82	+0.0
112,758	-		MPMX19_05963	0.82	-1.3
112,758	-		MPMX19_05963	0.82	-0.3
112,760	+		MPMX19_05963	0.82	-0.5
112,760	+		MPMX19_05963	0.82	-0.7
112,760	+		MPMX19_05963	0.82	-0.2
112,760	+		MPMX19_05963	0.82	-0.6
112,760	+		MPMX19_05963	0.82	+0.3
112,760	+		MPMX19_05963	0.82	-3.7
112,760	+		MPMX19_05963	0.82	-0.2
112,760	+		MPMX19_05963	0.82	-0.3
112,760	+		MPMX19_05963	0.82	-0.1
112,760	+		MPMX19_05963	0.82	-0.5
112,760	+		MPMX19_05963	0.82	-1.9
112,760	+		MPMX19_05963	0.82	+0.2
112,760	+		MPMX19_05963	0.82	-0.2
112,760	+		MPMX19_05963	0.82	+0.1
112,760	+		MPMX19_05963	0.82	-0.7
112,760	+		MPMX19_05963	0.82	-0.8
112,760	+		MPMX19_05963	0.82	-0.2
112,761	-		MPMX19_05963	0.82	-0.6
112,761	-		MPMX19_05963	0.82	-1.0
112,761	-		MPMX19_05963	0.82	-0.8
112,761	-		MPMX19_05963	0.82	-0.1
112,761	-		MPMX19_05963	0.82	-0.0
112,761	-		MPMX19_05963	0.82	-0.5
112,780	+		MPMX19_05963	0.83	+0.6
112,780	+		MPMX19_05963	0.83	+0.3
112,780	+		MPMX19_05963	0.83	+0.8
112,780	+		MPMX19_05963	0.83	-0.2
112,780	+		MPMX19_05963	0.83	-0.9
112,780	+		MPMX19_05963	0.83	-0.7
112,780	+		MPMX19_05963	0.83	-0.9
112,780	+		MPMX19_05963	0.83	-0.3
112,780	+		MPMX19_05963	0.83	-0.5
112,780	+		MPMX19_05963	0.83	-0.2
112,780	+		MPMX19_05963	0.83	-1.8
112,780	+		MPMX19_05963	0.83	-0.3
112,780	+		MPMX19_05963	0.83	-1.3
112,780	+		MPMX19_05963	0.83	-0.6
112,780	+		MPMX19_05963	0.83	-1.9
112,780	+		MPMX19_05963	0.83	-0.1
112,781	-		MPMX19_05963	0.83	-0.0
112,781	-		MPMX19_05963	0.83	-0.8
112,781	-		MPMX19_05963	0.83	-1.5
112,781	-		MPMX19_05963	0.83	-1.0
112,781	-		MPMX19_05963	0.83	-0.0
112,781	-		MPMX19_05963	0.83	-1.0
112,781	-		MPMX19_05963	0.83	+0.1
112,781	-		MPMX19_05963	0.83	-1.9
112,954	+				+0.8
112,954	+				-1.0
112,954	+				-0.2
112,954	+				-1.3
112,954	+				-0.0
112,954	+				-2.8
112,954	+				+0.5
112,954	+				-0.5
112,955	-				-0.2
112,955	-				+1.2
112,955	-				+0.4
112,955	-				+0.4
112,955	-				+1.3
112,955	-				-0.2
112,955	-				-0.4
112,955	-				-1.8
112,996	+				-0.6
112,996	+				-1.8
112,996	+				-1.0
112,996	+				-0.1
112,996	+				-0.1
112,997	-				+0.4
112,997	-				+0.9
112,997	-				-1.9
112,997	-				-0.2
112,997	-				-2.3
112,997	-				+0.6
112,997	-				-1.8
113,105	+				-0.5
113,105	+				+0.4
113,105	+				-1.2
113,105	+				-0.9
113,105	+				-0.1
113,105	+				-0.5
113,105	+				+0.2
113,105	+				-2.8
113,106	-				-0.5
113,106	-				+0.4
113,106	-				-0.2
113,106	-				+0.4
113,106	-				-0.5
113,106	-				+0.1
113,106	-				-0.2
113,106	-				+0.5
113,106	-				+0.4
113,106	-				-1.6
113,106	-				-0.5
113,154	+				-2.0
113,154	+				-3.2
113,154	+				-0.2
113,330	+				-1.8
113,330	+				-0.1
113,330	+				-0.5
113,330	+				-0.0
113,330	+				-2.5
113,330	+				+0.8
113,330	+				+0.4
113,330	+				-1.9
113,330	+				-0.3
113,330	+				-1.1
113,330	+				-0.7
113,330	+				+0.7
113,330	+				-1.3
113,330	+				-1.0
113,331	-				+0.4
113,331	-				-0.8
113,331	-				+0.6
113,331	-				-0.8
113,331	-				+0.7
113,331	-				+0.5
113,331	-				-0.0
113,331	-				-0.8
113,331	-				+0.3
113,331	-				-0.5
113,331	-				-1.3
113,331	-				-1.4
113,331	-				+0.4
113,331	-				-0.1
113,331	-				+0.4
113,331	-				-2.1
113,331	-				-1.4
113,331	-				-0.2
113,393	+		MPMX19_05964	0.14	+0.5
113,393	+		MPMX19_05964	0.14	-1.0
113,429	+		MPMX19_05964	0.17	+1.5
113,429	+		MPMX19_05964	0.17	-0.3
113,429	+		MPMX19_05964	0.17	-0.0
113,429	+		MPMX19_05964	0.17	+1.3
113,430	-		MPMX19_05964	0.18	-0.7
113,450	+		MPMX19_05964	0.19	+0.5
113,450	+		MPMX19_05964	0.19	+0.5
113,451	-		MPMX19_05964	0.20	+1.1
113,451	-		MPMX19_05964	0.20	-1.6
113,451	-		MPMX19_05964	0.20	+1.2
113,451	-		MPMX19_05964	0.20	-0.3
113,451	-		MPMX19_05964	0.20	-0.6
113,451	-		MPMX19_05964	0.20	-0.9
113,451	-		MPMX19_05964	0.20	-0.0
113,451	-		MPMX19_05964	0.20	-0.0
113,451	-		MPMX19_05964	0.20	-1.8
113,483	+		MPMX19_05964	0.23	+0.5
113,483	+		MPMX19_05964	0.23	-1.0
113,483	+		MPMX19_05964	0.23	-0.5
113,483	+		MPMX19_05964	0.23	-1.3
113,483	+		MPMX19_05964	0.23	-0.2
113,483	+		MPMX19_05964	0.23	+0.8
113,483	+		MPMX19_05964	0.23	+0.4
113,483	+		MPMX19_05964	0.23	+0.5
113,483	+		MPMX19_05964	0.23	+0.2
113,483	+		MPMX19_05964	0.23	-1.0
113,483	+		MPMX19_05964	0.23	+0.2
113,483	+		MPMX19_05964	0.23	-0.9
113,483	+		MPMX19_05964	0.23	-2.4
113,483	+		MPMX19_05964	0.23	+0.3
113,484	-		MPMX19_05964	0.23	+0.6
113,484	-		MPMX19_05964	0.23	-0.3
113,484	-		MPMX19_05964	0.23	-0.8
113,484	-		MPMX19_05964	0.23	-0.9
113,484	-		MPMX19_05964	0.23	-3.0
113,484	-		MPMX19_05964	0.23	-1.0
113,484	-		MPMX19_05964	0.23	+0.7
113,484	-		MPMX19_05964	0.23	-0.2
113,484	-		MPMX19_05964	0.23	-1.2
113,484	-		MPMX19_05964	0.23	-0.9
113,484	-		MPMX19_05964	0.23	+0.8
113,528	+		MPMX19_05964	0.27	+1.2
113,528	+		MPMX19_05964	0.27	+0.2
113,528	+		MPMX19_05964	0.27	-0.0
113,529	-		MPMX19_05964	0.27	+0.3
113,603	+		MPMX19_05964	0.34	+0.1
113,604	-		MPMX19_05964	0.34	+0.6
113,711	+		MPMX19_05964	0.44	+0.7
113,895	+		MPMX19_05964	0.61	+1.2
113,895	+		MPMX19_05964	0.61	-1.0
113,895	+		MPMX19_05964	0.61	-0.7
113,895	+		MPMX19_05964	0.61	-2.5
113,896	-		MPMX19_05964	0.61	-0.3
113,896	-		MPMX19_05964	0.61	-2.6
113,896	-		MPMX19_05964	0.61	+1.1
113,896	-		MPMX19_05964	0.61	-1.0
113,896	-		MPMX19_05964	0.61	-1.3
113,897	+		MPMX19_05964	0.61	+0.1
113,897	+		MPMX19_05964	0.61	+0.1
113,897	+		MPMX19_05964	0.61	-0.5
113,897	+		MPMX19_05964	0.61	-1.2
113,898	-		MPMX19_05964	0.61	+0.2
113,898	-		MPMX19_05964	0.61	-0.1
113,993	+		MPMX19_05964	0.70	-1.4
113,993	+		MPMX19_05964	0.70	-1.3
113,993	+		MPMX19_05964	0.70	-0.0
113,994	-		MPMX19_05964	0.70	+0.4
113,994	-		MPMX19_05964	0.70	-0.3
113,994	-		MPMX19_05964	0.70	-0.2
113,994	-		MPMX19_05964	0.70	+0.2
114,062	+		MPMX19_05964	0.77	-0.7
114,062	+		MPMX19_05964	0.77	-0.8
114,062	+		MPMX19_05964	0.77	+0.4
114,062	+		MPMX19_05964	0.77	-1.8
114,062	+		MPMX19_05964	0.77	+0.5
114,062	+		MPMX19_05964	0.77	-1.0
114,062	+		MPMX19_05964	0.77	-0.5
114,062	+		MPMX19_05964	0.77	+0.3
114,062	+		MPMX19_05964	0.77	-0.7
114,062	+		MPMX19_05964	0.77	+0.2
114,062	+		MPMX19_05964	0.77	-0.5
114,062	+		MPMX19_05964	0.77	+0.3
114,063	-		MPMX19_05964	0.77	-1.8
114,063	-		MPMX19_05964	0.77	-1.0
114,063	-		MPMX19_05964	0.77	-0.5
114,063	-		MPMX19_05964	0.77	-0.5
114,063	-		MPMX19_05964	0.77	+0.5
114,063	-		MPMX19_05964	0.77	-0.8
114,063	-		MPMX19_05964	0.77	-1.2
114,063	-		MPMX19_05964	0.77	-0.2
114,063	-		MPMX19_05964	0.77	+1.5
114,063	-		MPMX19_05964	0.77	-0.0
114,063	-		MPMX19_05964	0.77	-2.4
114,063	-		MPMX19_05964	0.77	-1.4
114,063	-		MPMX19_05964	0.77	+0.5
114,063	-		MPMX19_05964	0.77	+1.0
114,063	-		MPMX19_05964	0.77	+0.1
114,063	-		MPMX19_05964	0.77	-0.7