Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03560

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 2
3,983,798	-				-1.8
3,984,569	-				-0.8
3,984,761	-		MIT1002_03560	0.26	-2.5
3,985,488	+				-1.5
3,985,496	-				-0.2
3,985,512	+				-2.8
3,985,520	-				-1.9
3,985,574	-				-1.2
3,985,610	+				-0.2
3,985,610	+				+0.8
3,985,618	-				+0.0
3,985,649	-				+0.6
3,985,742	+				-0.4
3,985,750	-				-1.0
3,985,766	-				-1.7
3,985,768	+				-0.5
3,985,771	-				-0.6
3,985,778	+				-1.9
3,985,778	+				-1.3
3,985,820	-				-0.8
3,985,839	+				-1.8
3,985,844	+				-0.7
3,985,847	-				-0.8
3,985,847	-				-0.8
3,986,021	+		MIT1002_03561	0.16	-1.7
3,986,029	-		MIT1002_03561	0.17	-0.7
3,986,042	+		MIT1002_03561	0.17	-2.5
3,986,042	-		MIT1002_03561	0.17	-0.5
3,986,049	+		MIT1002_03561	0.17	-0.5
3,986,050	-		MIT1002_03561	0.17	+0.2
3,986,055	+		MIT1002_03561	0.18	-0.5
3,986,159	-		MIT1002_03561	0.21	-1.0
3,986,216	+		MIT1002_03561	0.23	-2.8
3,986,224	-		MIT1002_03561	0.24	-0.6
3,986,259	-		MIT1002_03561	0.25	-0.9
3,986,275	+		MIT1002_03561	0.26	-0.7
3,986,275	+		MIT1002_03561	0.26	+0.5
3,986,280	+		MIT1002_03561	0.26	-0.8
3,986,283	-		MIT1002_03561	0.26	-2.3
3,986,324	+		MIT1002_03561	0.27	-0.3
3,986,332	-		MIT1002_03561	0.28	-1.5
3,986,332	-		MIT1002_03561	0.28	+1.5
3,986,332	-		MIT1002_03561	0.28	-3.2
3,986,339	-		MIT1002_03561	0.28	+1.4
3,986,340	-		MIT1002_03561	0.28	-1.1
3,986,392	+		MIT1002_03561	0.30	-0.5
3,986,399	-		MIT1002_03561	0.30	-1.6
3,986,400	+		MIT1002_03561	0.30	-0.9
3,986,408	-		MIT1002_03561	0.31	-0.2
3,986,410	-		MIT1002_03561	0.31	-0.8
3,986,410	-		MIT1002_03561	0.31	+0.2