Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02895

Experiment: monoculture; Experiment C, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 4
3,218,641	+		MIT1002_02894	0.40	-0.5
3,218,641	+		MIT1002_02894	0.40	-3.1
3,218,649	-		MIT1002_02894	0.41	+0.3
3,218,659	-		MIT1002_02894	0.41	-0.7
3,218,663	+		MIT1002_02894	0.42	-0.5
3,218,685	-		MIT1002_02894	0.43	-0.8
3,218,685	-		MIT1002_02894	0.43	+0.3
3,218,698	+		MIT1002_02894	0.44	-0.9
3,218,752	+		MIT1002_02894	0.49	-0.2
3,218,760	-		MIT1002_02894	0.49	-0.4
3,218,770	-		MIT1002_02894	0.50	-0.4
3,218,780	+		MIT1002_02894	0.51	-0.0
3,218,791	+		MIT1002_02894	0.52	-0.4
3,218,801	-		MIT1002_02894	0.52	-0.2
3,218,854	-		MIT1002_02894	0.57	-3.6
3,218,864	+		MIT1002_02894	0.57	-1.6
3,218,866	+		MIT1002_02894	0.57	-0.8
3,218,901	-		MIT1002_02894	0.60	-0.2
3,218,909	-		MIT1002_02894	0.61	-0.5
3,218,911	+		MIT1002_02894	0.61	-0.2
3,218,911	-		MIT1002_02894	0.61	-0.7
3,218,971	-		MIT1002_02894	0.66	+1.3
3,219,029	+		MIT1002_02894	0.70	+0.3
3,219,039	+		MIT1002_02894	0.71	+0.5
3,219,039	+		MIT1002_02894	0.71	+0.7
3,219,093	+		MIT1002_02894	0.75	+0.3
3,219,096	+		MIT1002_02894	0.75	+0.3
3,219,101	-		MIT1002_02894	0.76	-0.2
3,219,136	-		MIT1002_02894	0.79	+0.4
3,219,152	+		MIT1002_02894	0.80	-0.1
3,219,181	+		MIT1002_02894	0.82	+0.8
3,219,253	-		MIT1002_02894	0.88	-0.2
3,219,274	+		MIT1002_02894	0.89	+1.7
3,219,282	-		MIT1002_02894	0.90	+0.3
3,219,397	+				+0.6
3,219,411	+				-0.7
3,219,420	+				-0.1
3,219,420	-				-0.4
3,219,459	-				+0.5
3,219,599	+				-1.5
3,219,607	-				+2.0
3,219,627	+				-0.1
3,219,635	-				+1.3
3,219,662	-		MIT1002_02895	0.20	-1.6
3,219,753	-		MIT1002_02895	0.77	-1.7
3,219,756	+		MIT1002_02895	0.79	-2.7
3,219,797	-				+0.4
3,219,803	+				-0.5
3,219,843	-				+0.9
3,219,909	-				-2.7
3,219,962	-				-1.1
3,220,117	-				-1.1
3,220,166	+				+0.4
3,220,199	-				-0.2
3,220,250	+				-1.7
3,220,389	-		MIT1002_02896	0.31	-1.5
3,220,394	+		MIT1002_02896	0.32	+1.8
3,220,399	+		MIT1002_02896	0.33	-0.2
3,220,407	-		MIT1002_02896	0.35	-0.3
3,220,444	+		MIT1002_02896	0.42	-0.3
3,220,447	-		MIT1002_02896	0.43	-0.2
3,220,464	+		MIT1002_02896	0.46	-1.1
3,220,477	-		MIT1002_02896	0.49	-0.4
3,220,477	-		MIT1002_02896	0.49	+1.3
3,220,550	+		MIT1002_02896	0.64	-0.0
3,220,672	-		MIT1002_02896	0.88	+1.0
3,220,678	+		MIT1002_02896	0.89	-0.5
3,220,738	+				+1.0