Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS07050

Experiment: biofilm; Day1; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	biofilm; Day1; NLDM; Aluminum chloride 1mM
1,585,875	+				-1.0
1,585,876	-				+0.3
1,585,899	-				+0.1
1,585,899	-				+1.7
1,586,336	+		LRK53_RS07045	0.73	-0.7
1,586,336	+		LRK53_RS07045	0.73	-0.8
1,586,337	-		LRK53_RS07045	0.73	+0.8
1,586,337	-		LRK53_RS07045	0.73	+0.5
1,586,337	-		LRK53_RS07045	0.73	-0.9
1,586,337	-		LRK53_RS07045	0.73	-0.1
1,586,538	+				-0.2
1,586,538	+				-1.1
1,586,538	+				-1.1
1,586,539	-				-0.5
1,586,539	-				-0.5
1,586,539	-				+1.0
1,586,539	-				+0.7
1,586,609	-				-0.9
1,586,609	-				+0.6
1,586,609	-				+1.9
1,586,609	-				-0.2
1,586,609	-				+1.0
1,586,665	+				+1.3
1,586,665	+				-1.1
1,586,665	+				-0.9
1,586,665	+				-1.6
1,586,665	+				-0.6
1,586,665	+				-2.6
1,586,666	-				-1.3
1,586,666	-				+1.1
1,586,666	-				+1.3
1,586,666	-				+2.2
1,586,666	-				+1.3
1,586,666	-				-2.0
1,586,666	-				-0.7
1,586,695	+				-1.9
1,586,696	-				+3.0
1,587,077	+		LRK53_RS07050	0.19	+0.1
1,587,077	+		LRK53_RS07050	0.19	+0.3
1,587,077	+		LRK53_RS07050	0.19	-0.2
1,587,077	+		LRK53_RS07050	0.19	-1.1
1,587,077	+		LRK53_RS07050	0.19	-0.2
1,587,077	+		LRK53_RS07050	0.19	+0.4
1,587,077	+		LRK53_RS07050	0.19	+0.7
1,587,077	+		LRK53_RS07050	0.19	-0.1
1,587,077	+		LRK53_RS07050	0.19	-1.4
1,587,077	+		LRK53_RS07050	0.19	-0.1
1,587,078	-		LRK53_RS07050	0.19	-1.3
1,587,177	+		LRK53_RS07050	0.25	-0.7
1,587,178	-		LRK53_RS07050	0.25	-0.1
1,587,226	+		LRK53_RS07050	0.28	+0.0
1,587,226	+		LRK53_RS07050	0.28	-1.6
1,587,226	+		LRK53_RS07050	0.28	-0.5
1,587,227	-		LRK53_RS07050	0.28	-1.0
1,587,227	-		LRK53_RS07050	0.28	-2.4
1,587,227	-		LRK53_RS07050	0.28	+1.3
1,587,227	-		LRK53_RS07050	0.28	-1.7
1,587,344	+		LRK53_RS07050	0.35	-0.7
1,587,345	-		LRK53_RS07050	0.35	+0.1
1,587,345	-		LRK53_RS07050	0.35	-1.1
1,587,345	-		LRK53_RS07050	0.35	+0.2
1,587,524	+		LRK53_RS07050	0.45	-1.5
1,587,524	+		LRK53_RS07050	0.45	-0.5
1,587,524	+		LRK53_RS07050	0.45	-1.5
1,587,524	+		LRK53_RS07050	0.45	+3.1
1,587,524	+		LRK53_RS07050	0.45	-2.0
1,587,524	+		LRK53_RS07050	0.45	+1.4
1,587,524	+		LRK53_RS07050	0.45	-4.0
1,587,525	-		LRK53_RS07050	0.46	+1.7
1,587,525	-		LRK53_RS07050	0.46	-1.6
1,587,525	-		LRK53_RS07050	0.46	-0.1
1,587,525	-		LRK53_RS07050	0.46	+1.1
1,587,525	-		LRK53_RS07050	0.46	-0.9
1,587,854	+		LRK53_RS07050	0.65	+0.2
1,587,854	+		LRK53_RS07050	0.65	+1.0
1,587,926	+		LRK53_RS07050	0.69	-0.7
1,587,926	+		LRK53_RS07050	0.69	-0.5
1,587,927	-		LRK53_RS07050	0.69	+4.0
1,587,927	-		LRK53_RS07050	0.69	-0.1
1,588,163	+		LRK53_RS07050	0.83	+1.0
1,588,164	-		LRK53_RS07050	0.83	-1.8
1,588,319	+				-3.2
1,588,319	+				-0.7
1,588,319	+				-0.1
1,588,319	+				-0.9
1,588,319	+				+0.9
1,588,319	+				-0.0
1,588,319	+				-0.2
1,588,319	+				-0.5
1,588,319	+				-2.2
1,588,319	+				-0.2
1,588,319	+				-0.1
1,588,319	+				-0.6
1,588,319	+				-0.3
1,588,319	+				+0.7
1,588,319	+				-1.3
1,588,319	+				-0.5
1,588,320	-				-0.7
1,588,320	-				-0.3
1,588,320	-				-2.5
1,588,320	-				-1.1
1,588,320	-				+0.1
1,588,366	-				-1.7
1,588,436	+				-0.2
1,588,437	-				-1.5
1,588,437	-				-0.1
1,588,517	+				+0.3
1,588,517	+				+0.3
1,588,517	+				-1.2
1,588,518	-				-0.7
1,588,753	+		LRK53_RS07055	0.11	+0.8
1,588,753	+		LRK53_RS07055	0.11	-1.7
1,588,754	-		LRK53_RS07055	0.11	+0.6
1,588,754	-		LRK53_RS07055	0.11	+0.5
1,588,754	-		LRK53_RS07055	0.11	+3.3
1,588,754	-		LRK53_RS07055	0.11	-1.4
1,588,793	+		LRK53_RS07055	0.13	+0.1
1,588,794	-		LRK53_RS07055	0.13	-0.3
1,588,852	+		LRK53_RS07055	0.16	+1.0
1,588,852	+		LRK53_RS07055	0.16	-0.6
1,588,852	+		LRK53_RS07055	0.16	-0.7
1,588,852	+		LRK53_RS07055	0.16	-0.9
1,588,853	-		LRK53_RS07055	0.16	-0.1
1,588,853	-		LRK53_RS07055	0.16	-2.5
1,588,853	-		LRK53_RS07055	0.16	-1.5
1,588,853	-		LRK53_RS07055	0.16	-1.3
1,588,853	-		LRK53_RS07055	0.16	+0.1
1,588,864	+		LRK53_RS07055	0.16	+1.8
1,588,864	+		LRK53_RS07055	0.16	-0.1
1,588,864	+		LRK53_RS07055	0.16	-1.2
1,588,865	-		LRK53_RS07055	0.16	+2.0
1,588,865	-		LRK53_RS07055	0.16	-0.3
1,588,865	-		LRK53_RS07055	0.16	-1.1
1,589,293	+		LRK53_RS07055	0.35	-1.4
1,589,294	-		LRK53_RS07055	0.36	+0.1
1,589,311	+		LRK53_RS07055	0.36	-2.7
1,589,311	+		LRK53_RS07055	0.36	+1.1
1,589,311	+		LRK53_RS07055	0.36	+0.4
1,589,311	+		LRK53_RS07055	0.36	-1.2
1,589,311	+		LRK53_RS07055	0.36	-0.5
1,589,312	-		LRK53_RS07055	0.36	-0.9
1,589,312	-		LRK53_RS07055	0.36	-0.3
1,589,312	-		LRK53_RS07055	0.36	+1.1
1,589,341	+		LRK53_RS07055	0.38	-1.7
1,589,341	+		LRK53_RS07055	0.38	-0.3
1,589,342	-		LRK53_RS07055	0.38	-1.7
1,589,342	-		LRK53_RS07055	0.38	-0.1
1,589,342	-		LRK53_RS07055	0.38	-1.1
1,589,342	-		LRK53_RS07055	0.38	+0.1
1,589,342	-		LRK53_RS07055	0.38	-1.6
1,589,342	-		LRK53_RS07055	0.38	-0.2
1,589,342	-		LRK53_RS07055	0.38	-0.1
1,589,342	-		LRK53_RS07055	0.38	-0.2
1,589,404	+		LRK53_RS07055	0.40	-3.0
1,589,404	+		LRK53_RS07055	0.40	-0.1
1,589,404	+		LRK53_RS07055	0.40	-0.3
1,589,404	+		LRK53_RS07055	0.40	-2.0
1,589,404	+		LRK53_RS07055	0.40	-2.0
1,589,404	+		LRK53_RS07055	0.40	+0.9
1,589,404	+		LRK53_RS07055	0.40	-0.6
1,589,404	+		LRK53_RS07055	0.40	-0.4
1,589,404	+		LRK53_RS07055	0.40	-0.7
1,589,404	+		LRK53_RS07055	0.40	-1.9
1,589,404	+		LRK53_RS07055	0.40	-1.5
1,589,404	+		LRK53_RS07055	0.40	-0.1
1,589,404	+		LRK53_RS07055	0.40	-1.0
1,589,404	+		LRK53_RS07055	0.40	-1.4
1,589,404	+		LRK53_RS07055	0.40	-0.9
1,589,404	+		LRK53_RS07055	0.40	-0.2
1,589,404	+		LRK53_RS07055	0.40	-0.3
1,589,405	-		LRK53_RS07055	0.41	-1.2
1,589,405	-		LRK53_RS07055	0.41	-0.1
1,589,405	-		LRK53_RS07055	0.41	-2.4
1,589,405	-		LRK53_RS07055	0.41	-1.1
1,589,405	-		LRK53_RS07055	0.41	-0.1
1,589,405	-		LRK53_RS07055	0.41	+0.4
1,589,405	-		LRK53_RS07055	0.41	-0.6
1,589,410	+		LRK53_RS07055	0.41	+1.0
1,589,410	+		LRK53_RS07055	0.41	-1.4
1,589,410	+		LRK53_RS07055	0.41	-0.1
1,589,410	+		LRK53_RS07055	0.41	-0.3
1,589,410	+		LRK53_RS07055	0.41	-0.6
1,589,410	+		LRK53_RS07055	0.41	-0.6
1,589,411	-		LRK53_RS07055	0.41	+0.6
1,589,411	-		LRK53_RS07055	0.41	+0.7