Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03722

Experiment: monoculture; Experiment C, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment C, time point 2
4,154,384	+				-0.2
4,154,412	+				+0.9
4,154,415	-				+0.9
4,154,429	+				-0.6
4,154,429	+				+0.4
4,154,455	+				-0.3
4,154,455	+				+0.0
4,154,475	-				+0.2
4,154,514	+				+0.4
4,154,514	+				-0.2
4,154,514	+				-0.0
4,154,514	+				-1.5
4,154,514	+				-0.9
4,154,514	+				-1.5
4,154,514	+				-0.9
4,154,514	+				-0.2
4,154,522	-				+0.1
4,154,522	-				-0.9
4,154,522	-				-0.3
4,154,532	-				-0.1
4,154,579	+		MIT1002_03721	0.10	+0.2
4,154,655	+		MIT1002_03721	0.20	+0.3
4,154,708	+		MIT1002_03721	0.27	-0.3
4,154,792	+		MIT1002_03721	0.37	+0.2
4,154,822	-		MIT1002_03721	0.41	-0.7
4,154,832	-		MIT1002_03721	0.43	-2.0
4,154,902	+		MIT1002_03721	0.52	+1.0
4,154,910	-		MIT1002_03721	0.53	-2.7
4,154,910	-		MIT1002_03721	0.53	+0.1
4,154,929	-		MIT1002_03721	0.55	-1.3
4,154,936	-		MIT1002_03721	0.56	+1.7
4,154,946	-		MIT1002_03721	0.57	-0.1
4,154,949	+		MIT1002_03721	0.58	+0.5
4,154,955	-		MIT1002_03721	0.58	+2.3
4,154,957	-		MIT1002_03721	0.59	+0.8
4,154,960	-		MIT1002_03721	0.59	-0.7
4,154,962	-		MIT1002_03721	0.59	+2.6
4,155,035	-		MIT1002_03721	0.69	+0.8
4,155,069	+		MIT1002_03721	0.73	-1.2
4,155,069	+		MIT1002_03721	0.73	+0.1
4,155,077	-		MIT1002_03721	0.74	-1.9
4,155,077	-		MIT1002_03721	0.74	-1.1
4,155,085	-		MIT1002_03721	0.75	+3.4
4,155,231	+				+1.1
4,155,394	-				+1.0
4,155,407	-				+0.1
4,155,413	+				+0.7
4,155,440	-				+0.5
4,155,452	-				+0.3
4,155,454	+				+0.2
4,155,470	-				-1.5
4,155,477	-				+0.5
4,155,518	+				+0.8
4,155,540	+				-0.5
4,155,557	+				+0.2
4,155,557	+				+1.4
4,155,565	-				+0.3
4,155,582	-				+0.7
4,155,583	+				+0.2
4,155,598	+				-0.2
4,155,630	+		MIT1002_03722	0.11	-1.5
4,155,630	+		MIT1002_03722	0.11	+0.3
4,155,649	+		MIT1002_03722	0.12	-0.1
4,155,704	-		MIT1002_03722	0.14	-0.8
4,155,760	+		MIT1002_03722	0.17	+0.2
4,155,803	+		MIT1002_03722	0.18	-1.0
4,155,808	-		MIT1002_03722	0.19	-0.9
4,155,835	+		MIT1002_03722	0.20	-1.0
4,155,852	-		MIT1002_03722	0.21	-1.3
4,155,867	+		MIT1002_03722	0.21	+0.9
4,155,907	-		MIT1002_03722	0.23	+2.6
4,155,913	+		MIT1002_03722	0.23	-1.3
4,156,036	+		MIT1002_03722	0.29	+0.3
4,156,044	-		MIT1002_03722	0.29	-1.3
4,156,072	+		MIT1002_03722	0.30	-0.9
4,156,109	+		MIT1002_03722	0.32	+0.9
4,156,119	+		MIT1002_03722	0.32	+0.9
4,156,119	+		MIT1002_03722	0.32	-1.8
4,156,171	-		MIT1002_03722	0.35	+1.8
4,156,171	-		MIT1002_03722	0.35	+0.7
4,156,171	-		MIT1002_03722	0.35	+0.5
4,156,228	+		MIT1002_03722	0.37	+1.2
4,156,264	+		MIT1002_03722	0.39	+0.3
4,156,319	-		MIT1002_03722	0.41	+1.4
4,156,458	-		MIT1002_03722	0.47	-1.4
4,156,482	-		MIT1002_03722	0.48	-0.5
4,156,549	+		MIT1002_03722	0.51	-0.3
4,156,557	-		MIT1002_03722	0.51	+0.2
4,156,568	+		MIT1002_03722	0.52	-0.2
4,156,589	+		MIT1002_03722	0.53	-1.9
4,156,660	-		MIT1002_03722	0.56	-0.7
4,156,669	+		MIT1002_03722	0.56	+0.3
4,156,677	-		MIT1002_03722	0.57	+0.4
4,156,699	-		MIT1002_03722	0.58	+1.8
4,156,841	+		MIT1002_03722	0.64	+0.5
4,156,841	+		MIT1002_03722	0.64	-0.7
4,156,849	-		MIT1002_03722	0.64	-0.6
4,156,849	-		MIT1002_03722	0.64	-1.5
4,156,899	-		MIT1002_03722	0.66	+0.1
4,156,951	+		MIT1002_03722	0.69	+0.4
4,156,951	-		MIT1002_03722	0.69	-0.4
4,157,065	-		MIT1002_03722	0.74	-0.3
4,157,065	-		MIT1002_03722	0.74	-1.0
4,157,066	-		MIT1002_03722	0.74	-1.2
4,157,066	-		MIT1002_03722	0.74	-0.6
4,157,066	-		MIT1002_03722	0.74	-0.2
4,157,066	-		MIT1002_03722	0.74	+0.5
4,157,093	+		MIT1002_03722	0.75	-0.2
4,157,101	-		MIT1002_03722	0.75	-0.4
4,157,127	+		MIT1002_03722	0.76	-1.5
4,157,138	+		MIT1002_03722	0.77	-0.4
4,157,144	+		MIT1002_03722	0.77	+0.7
4,157,197	+		MIT1002_03722	0.79	-1.0
4,157,218	+		MIT1002_03722	0.80	+0.0
4,157,226	-		MIT1002_03722	0.81	+0.5
4,157,236	+		MIT1002_03722	0.81	-2.4
4,157,246	+		MIT1002_03722	0.81	+0.5
4,157,254	-		MIT1002_03722	0.82	-3.1
4,157,304	-		MIT1002_03722	0.84	+0.0
4,157,319	+		MIT1002_03722	0.85	+0.1
4,157,408	+		MIT1002_03722	0.88	-0.0
4,157,413	+		MIT1002_03722	0.89	-1.6
4,157,413	+		MIT1002_03722	0.89	+0.1
4,157,413	+		MIT1002_03722	0.89	+0.2
4,157,413	+		MIT1002_03722	0.89	-0.9
4,157,413	+		MIT1002_03722	0.89	-1.3
4,157,416	-		MIT1002_03722	0.89	+0.1
4,157,421	-		MIT1002_03722	0.89	+0.5
4,157,421	-		MIT1002_03722	0.89	+0.2
4,157,441	-		MIT1002_03722	0.90	+0.1
4,157,525	+				+2.1
4,157,535	+				-1.2
4,157,535	+				-0.9
4,157,689	+				-0.2
4,157,695	-				+0.7
4,157,702	-				-0.3
4,157,938	+				-2.1
4,157,938	+				-0.3
4,158,128	+				-0.3
4,158,210	+		MIT1002_03723	0.15	+0.9
4,158,242	-		MIT1002_03723	0.18	-0.4
4,158,294	-		MIT1002_03723	0.23	-0.4
4,158,311	+		MIT1002_03723	0.24	+0.1
4,158,319	-		MIT1002_03723	0.25	+0.2
4,158,365	+		MIT1002_03723	0.29	+0.4
4,158,383	+		MIT1002_03723	0.31	+0.3
4,158,383	-		MIT1002_03723	0.31	-0.5
4,158,383	-		MIT1002_03723	0.31	-0.4
4,158,416	-		MIT1002_03723	0.34	-0.3
4,158,446	-		MIT1002_03723	0.37	-0.3
4,158,483	+		MIT1002_03723	0.40	+0.7
4,158,483	+		MIT1002_03723	0.40	-1.6
4,158,483	+		MIT1002_03723	0.40	+0.4
4,158,483	+		MIT1002_03723	0.40	-0.4
4,158,491	-		MIT1002_03723	0.41	-0.3
4,158,491	-		MIT1002_03723	0.41	-0.9
4,158,491	-		MIT1002_03723	0.41	-0.2
4,158,491	-		MIT1002_03723	0.41	-0.4
4,158,491	-		MIT1002_03723	0.41	+1.6
4,158,491	-		MIT1002_03723	0.41	-0.6
4,158,491	-		MIT1002_03723	0.41	+1.1
4,158,597	+		MIT1002_03723	0.50	-0.2
4,158,597	+		MIT1002_03723	0.50	-0.6
4,158,597	+		MIT1002_03723	0.50	-0.3
4,158,597	+		MIT1002_03723	0.50	-0.7
4,158,597	+		MIT1002_03723	0.50	+0.3
4,158,597	+		MIT1002_03723	0.50	-0.1
4,158,597	+		MIT1002_03723	0.50	-0.4
4,158,597	+		MIT1002_03723	0.50	+0.5
4,158,605	-		MIT1002_03723	0.51	+0.4
4,158,605	-		MIT1002_03723	0.51	-0.2
4,158,605	-		MIT1002_03723	0.51	+0.9
4,158,605	-		MIT1002_03723	0.51	+0.2
4,158,605	-		MIT1002_03723	0.51	-0.1
4,158,605	-		MIT1002_03723	0.51	-1.7
4,158,605	-		MIT1002_03723	0.51	+0.9
4,158,605	-		MIT1002_03723	0.51	-0.6
4,158,605	-		MIT1002_03723	0.51	+0.7
4,158,605	-		MIT1002_03723	0.51	-0.2
4,158,637	-		MIT1002_03723	0.54	+0.8
4,158,641	-		MIT1002_03723	0.54	+1.7
4,158,654	-		MIT1002_03723	0.56	+1.9
4,158,654	-		MIT1002_03723	0.56	+1.5