Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02321

Experiment: monoculture; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment B, time point 3
2,589,130	+				+0.1
2,589,140	+				-0.0
2,589,140	+				+1.6
2,589,148	-				+0.9
2,589,152	+				-0.2
2,589,162	+				-1.2
2,589,168	-				+0.0
2,589,189	-		MIT1002_02320	0.10	+0.4
2,589,233	-		MIT1002_02320	0.15	+0.1
2,589,264	+		MIT1002_02320	0.18	-2.3
2,589,279	+		MIT1002_02320	0.19	+1.1
2,589,282	+		MIT1002_02320	0.20	-0.0
2,589,355	-		MIT1002_02320	0.27	-0.2
2,589,482	-		MIT1002_02320	0.40	-0.5
2,589,488	+		MIT1002_02320	0.40	-0.1
2,589,525	-		MIT1002_02320	0.44	-0.7
2,589,527	+		MIT1002_02320	0.44	+1.1
2,589,607	+		MIT1002_02320	0.52	-1.1
2,589,615	-		MIT1002_02320	0.53	-0.1
2,589,617	-		MIT1002_02320	0.53	+1.1
2,589,683	-		MIT1002_02320	0.60	+0.1
2,589,786	-		MIT1002_02320	0.70	-0.4
2,589,863	-		MIT1002_02320	0.78	+0.5
2,589,930	-		MIT1002_02320	0.85	+0.3
2,590,095	-				+0.5
2,590,095	-				+0.3
2,590,156	+				-0.9
2,590,248	-		MIT1002_02321	0.21	+0.7
2,590,294	-		MIT1002_02321	0.27	-0.1
2,590,294	-		MIT1002_02321	0.27	-0.5
2,590,370	+		MIT1002_02321	0.39	-0.3
2,590,398	-		MIT1002_02321	0.43	+0.6
2,590,439	+		MIT1002_02321	0.49	-0.9
2,590,439	+		MIT1002_02321	0.49	-0.5
2,590,448	-		MIT1002_02321	0.50	+1.3
2,590,495	+		MIT1002_02321	0.57	+1.4
2,590,503	-		MIT1002_02321	0.58	+1.4
2,590,504	+		MIT1002_02321	0.58	-1.8
2,590,520	+		MIT1002_02321	0.61	-0.4
2,590,528	-		MIT1002_02321	0.62	+0.0
2,590,533	-		MIT1002_02321	0.63	+0.6
2,590,623	+		MIT1002_02321	0.76	-0.2
2,590,699	-		MIT1002_02321	0.87	-1.9
2,590,731	+				-0.9
2,590,731	+				-0.3
2,590,739	-				+0.8
2,590,739	-				+0.3
2,590,757	-				+0.9
2,590,759	+				-0.3
2,590,759	+				+0.8
2,590,911	+				+0.4
2,590,928	+				-1.5
2,590,962	-		MIT1002_02322	0.12	+0.4
2,590,993	+		MIT1002_02322	0.15	+2.6
2,591,012	-		MIT1002_02322	0.18	+0.6
2,591,082	+		MIT1002_02322	0.26	-0.9
2,591,082	+		MIT1002_02322	0.26	-0.5
2,591,082	+		MIT1002_02322	0.26	+0.0
2,591,082	+		MIT1002_02322	0.26	-1.4
2,591,082	+		MIT1002_02322	0.26	-2.2
2,591,095	+		MIT1002_02322	0.28	+0.5
2,591,103	-		MIT1002_02322	0.29	-0.3
2,591,141	+		MIT1002_02322	0.33	+0.1
2,591,141	+		MIT1002_02322	0.33	-0.6
2,591,149	-		MIT1002_02322	0.34	+0.6
2,591,149	-		MIT1002_02322	0.34	+0.6
2,591,160	+		MIT1002_02322	0.36	-0.9
2,591,160	+		MIT1002_02322	0.36	-0.9
2,591,284	+		MIT1002_02322	0.51	-2.5
2,591,292	-		MIT1002_02322	0.52	+1.1
2,591,292	-		MIT1002_02322	0.52	-0.4
2,591,316	-		MIT1002_02322	0.55	+1.0
2,591,344	-		MIT1002_02322	0.58	-0.4
2,591,361	+		MIT1002_02322	0.60	+1.6
2,591,449	-		MIT1002_02322	0.71	+0.4
2,591,452	-		MIT1002_02322	0.72	-1.3
2,591,459	-		MIT1002_02322	0.72	-0.9
2,591,465	+		MIT1002_02322	0.73	-0.8
2,591,505	+		MIT1002_02322	0.78	-0.2
2,591,552	+		MIT1002_02322	0.84	-1.1
2,591,552	+		MIT1002_02322	0.84	-0.5
2,591,560	-		MIT1002_02322	0.85	-0.1
2,591,560	-		MIT1002_02322	0.85	+1.6
2,591,560	-		MIT1002_02322	0.85	+0.3
2,591,560	-		MIT1002_02322	0.85	+0.5
2,591,560	-		MIT1002_02322	0.85	+1.4
2,591,560	-		MIT1002_02322	0.85	-0.7
2,591,560	-		MIT1002_02322	0.85	+0.4
2,591,676	-				-1.3
2,591,702	+				-2.6
2,591,717	-				-0.8
2,591,751	+				-1.1
2,591,754	+				+0.4