Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03027

Experiment: monoculture; Experiment A, time point 1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMIT1002_03026 and MIT1002_03027 overlap by 4 nucleotidesMIT1002_03027 and MIT1002_03028 are separated by 21 nucleotides MIT1002_03026: MIT1002_03026 - Cell division protein FtsW, at 3,371,578 to 3,373,002 _03026 MIT1002_03027: MIT1002_03027 - UDP-N-acetylmuramoylalanine--D-glutamate ligase, at 3,372,999 to 3,374,516 _03027 MIT1002_03028: MIT1002_03028 - Phospho-N-acetylmuramoyl-pentapeptide- transferase, at 3,374,538 to 3,375,620 _03028 Position (kb) 3372 3373 3374 3375Strain fitness (log2 ratio) -1 0 1at 3374.537 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction monoculture; Experiment A, time point 1
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3,374,537 - -0.1

Or see this region's nucleotide sequence