Strain Fitness in Variovorax sp. SCN45 around GFF7329

Experiment: M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
59	+		GFF7328	0.23	+0.5
75	+		GFF7328	0.31	-0.3
75	+		GFF7328	0.31	-0.4
221	+				+0.5
221	+				+0.8
222	-				+1.5
719	+				-0.3
720	-				-0.6
743	+				-0.7
743	+				+0.2
744	-				+1.5
744	-				-0.4
744	-				-0.4
744	-				+0.4
744	-				-0.4
746	+				+0.1
746	+				+1.5
747	-				-1.1
879	-				-0.1
906	+				-0.4
1,069	-				+0.8
1,217	-		GFF7330	0.32	-0.9
1,254	-		GFF7330	0.40	-0.5
1,298	-		GFF7330	0.49	+0.8
1,316	+		GFF7330	0.52	+1.1
1,544	-				-0.2
1,590	-				-0.6
1,705	+				+0.5
1,705	+				-0.2
1,705	+				+1.2
1,706	-				-0.4
1,712	+				-0.4