Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14205

Experiment: Experiment:TE, Melon 5 Main Stem (TE-S-M5-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE, Melon 5 Main Stem (TE-S-M5-MS)
2,723,468	+		LU632_RS14195	0.18	-2.0
2,723,468	+		LU632_RS14195	0.18	-1.4
2,723,469	-		LU632_RS14195	0.18	+3.2
2,723,493	+		LU632_RS14195	0.22	-1.2
2,723,493	+		LU632_RS14195	0.22	+0.1
2,723,493	+		LU632_RS14195	0.22	-1.6
2,723,538	-		LU632_RS14195	0.28	+0.2
2,723,783	+		LU632_RS14195	0.64	-0.5
2,723,784	-		LU632_RS14195	0.64	+1.1
2,723,784	-		LU632_RS14195	0.64	+0.7
2,723,835	-		LU632_RS14195	0.71	-0.6
2,723,835	-		LU632_RS14195	0.71	+1.1
2,723,865	+		LU632_RS14195	0.76	-0.0
2,723,866	-		LU632_RS14195	0.76	+0.8
2,723,937	+		LU632_RS14195	0.86	+0.3
2,723,937	+		LU632_RS14195	0.86	+0.0
2,723,937	+		LU632_RS14195	0.86	+0.3
2,723,938	-		LU632_RS14195	0.86	+0.1
2,723,992	+				+2.0
2,723,999	-				-0.0
2,724,016	+				-1.9
2,724,016	+				+2.4
2,724,017	-				+0.0
2,724,072	-		LU632_RS14200	0.12	+0.0
2,724,072	-		LU632_RS14200	0.12	+2.9
2,724,166	+		LU632_RS14200	0.36	-0.3
2,724,167	-		LU632_RS14200	0.36	-1.1
2,724,184	+		LU632_RS14200	0.41	-2.6
2,724,298	-		LU632_RS14200	0.70	+0.1
2,724,692	+		LU632_RS14205	0.78	-1.2
2,724,692	+		LU632_RS14205	0.78	-2.0
2,724,696	+		LU632_RS14205	0.79	+1.0
2,724,709	+		LU632_RS14205	0.82	-0.8
2,724,723	+		LU632_RS14205	0.86	+1.8
2,724,723	+		LU632_RS14205	0.86	-2.2
2,724,723	+		LU632_RS14205	0.86	+2.3
2,724,728	-		LU632_RS14205	0.88	-2.4
2,724,796	-				-0.7
2,724,899	+		LU632_RS14210	0.17	-0.8
2,724,899	+		LU632_RS14210	0.17	+1.5
2,724,931	-		LU632_RS14210	0.23	-0.6
2,724,931	-		LU632_RS14210	0.23	+0.0
2,724,931	-		LU632_RS14210	0.23	-1.6
2,724,946	-		LU632_RS14210	0.25	+0.2
2,725,106	+		LU632_RS14210	0.51	-0.3
2,725,107	-		LU632_RS14210	0.51	-2.4
2,725,130	+		LU632_RS14210	0.55	+1.0
2,725,318	+		LU632_RS14210	0.86	-2.1
2,725,419	+				+1.6
2,725,419	+				-3.0
2,725,420	-				+3.0
2,725,423	-				-0.2
2,725,703	-		LU632_RS14215	0.67	+0.5