Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_10685

Experiment: R2A_PIPES pH 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4
2,290,595	+	pntB	OKGIIK_10675	0.75	-0.5
2,290,596	-	pntB	OKGIIK_10675	0.75	+1.0
2,290,690	+	pntB	OKGIIK_10675	0.81	+1.0
2,290,690	+	pntB	OKGIIK_10675	0.81	-0.2
2,290,690	+	pntB	OKGIIK_10675	0.81	-0.7
2,290,691	-	pntB	OKGIIK_10675	0.81	-0.5
2,290,691	-	pntB	OKGIIK_10675	0.81	+0.0
2,290,691	-	pntB	OKGIIK_10675	0.81	+0.2
2,290,930	+				+1.0
2,290,930	+				+0.4
2,290,930	+				-0.8
2,290,930	+				+1.6
2,290,930	+				+0.6
2,290,930	+				-0.2
2,290,930	+				-0.6
2,290,930	+				+1.3
2,290,931	-				+0.5
2,290,931	-				-1.4
2,290,931	-				-0.5
2,290,931	-				-1.2
2,290,931	-				-1.2
2,290,931	-				-0.2
2,291,034	+	pntA	OKGIIK_10680	0.23	-1.6
2,291,034	+	pntA	OKGIIK_10680	0.23	+0.3
2,291,034	+	pntA	OKGIIK_10680	0.23	+1.0
2,291,035	-	pntA	OKGIIK_10680	0.23	-1.1
2,291,035	-	pntA	OKGIIK_10680	0.23	+0.9
2,291,035	-	pntA	OKGIIK_10680	0.23	+1.3
2,291,179	+	pntA	OKGIIK_10680	0.70	+0.8
2,291,179	+	pntA	OKGIIK_10680	0.70	+0.3
2,291,179	+	pntA	OKGIIK_10680	0.70	-0.7
2,291,179	+	pntA	OKGIIK_10680	0.70	-0.5
2,291,179	+	pntA	OKGIIK_10680	0.70	-1.1
2,291,179	+	pntA	OKGIIK_10680	0.70	+0.3
2,291,180	-	pntA	OKGIIK_10680	0.71	+1.3
2,291,180	-	pntA	OKGIIK_10680	0.71	-0.2
2,291,180	-	pntA	OKGIIK_10680	0.71	+0.5
2,291,180	-	pntA	OKGIIK_10680	0.71	-0.5
2,291,180	-	pntA	OKGIIK_10680	0.71	+0.0
2,291,180	-	pntA	OKGIIK_10680	0.71	-0.7
2,291,180	-	pntA	OKGIIK_10680	0.71	+1.9
2,291,180	-	pntA	OKGIIK_10680	0.71	+0.0
2,291,180	-	pntA	OKGIIK_10680	0.71	+1.2
2,291,180	-	pntA	OKGIIK_10680	0.71	+0.9
2,291,244	+				+0.3
2,291,244	+				+0.7
2,291,244	+				-0.5
2,291,244	+				+0.3
2,291,244	+				+0.3
2,291,244	+				-0.2
2,291,244	+				-0.4
2,291,244	+				+0.0
2,291,244	+				-2.2
2,291,244	+				-0.1
2,291,245	-				+0.3
2,291,245	-				-2.2
2,291,245	-				+1.0
2,291,245	-				+0.3
2,291,245	-				+0.3
2,291,245	-				-1.4
2,291,245	-				-0.4
2,291,245	-				+0.5
2,291,245	-				-0.1
2,291,245	-				-0.8
2,291,245	-				+0.1
2,291,245	-				+1.3
2,291,245	-				-0.9
2,291,245	-				+0.3
2,291,245	-				-1.4
2,291,245	-				-0.5
2,291,245	-				+0.9
2,291,245	-				-0.1
2,291,245	-				-1.7
2,291,245	-				+0.8
2,291,245	-				-0.2
2,291,245	-				-0.2
2,291,319	+				+1.9
2,291,319	+				+0.0
2,291,320	-				-0.4
2,291,320	-				-1.0
2,291,320	-				-1.1
2,291,320	-				+0.9
2,291,320	-				+0.6
2,291,320	-				+0.0
2,291,320	-				+0.9
2,291,396	+	rpoE	OKGIIK_10685	0.11	+0.0
2,291,396	+	rpoE	OKGIIK_10685	0.11	-0.5
2,291,396	+	rpoE	OKGIIK_10685	0.11	-1.0
2,291,396	+	rpoE	OKGIIK_10685	0.11	-0.8
2,291,396	+	rpoE	OKGIIK_10685	0.11	+1.5
2,291,396	+	rpoE	OKGIIK_10685	0.11	-0.7
2,291,396	+	rpoE	OKGIIK_10685	0.11	-2.4
2,291,396	+	rpoE	OKGIIK_10685	0.11	-1.0
2,291,396	+	rpoE	OKGIIK_10685	0.11	-1.7
2,291,397	-	rpoE	OKGIIK_10685	0.11	-1.7
2,291,397	-	rpoE	OKGIIK_10685	0.11	+0.3
2,291,397	-	rpoE	OKGIIK_10685	0.11	+0.8
2,291,397	-	rpoE	OKGIIK_10685	0.11	+0.0
2,291,397	-	rpoE	OKGIIK_10685	0.11	-0.2
2,291,397	-	rpoE	OKGIIK_10685	0.11	-1.6
2,291,397	-	rpoE	OKGIIK_10685	0.11	-0.8
2,291,397	-	rpoE	OKGIIK_10685	0.11	+0.8
2,291,397	-	rpoE	OKGIIK_10685	0.11	-1.0
2,291,397	-	rpoE	OKGIIK_10685	0.11	-0.8
2,291,397	-	rpoE	OKGIIK_10685	0.11	+0.5
2,291,397	-	rpoE	OKGIIK_10685	0.11	+1.1
2,291,397	-	rpoE	OKGIIK_10685	0.11	-1.4
2,291,397	-	rpoE	OKGIIK_10685	0.11	-0.8
2,291,442	-	rpoE	OKGIIK_10685	0.17	-0.7
2,291,443	-	rpoE	OKGIIK_10685	0.17	-1.5
2,291,443	-	rpoE	OKGIIK_10685	0.17	-2.3
2,291,443	-	rpoE	OKGIIK_10685	0.17	+0.8
2,291,607	-	rpoE	OKGIIK_10685	0.42	-0.7
2,291,607	-	rpoE	OKGIIK_10685	0.42	-1.1
2,291,816	+	rpoE	OKGIIK_10685	0.72	-0.1
2,291,816	+	rpoE	OKGIIK_10685	0.72	+1.5
2,291,816	+	rpoE	OKGIIK_10685	0.72	-1.4
2,291,816	+	rpoE	OKGIIK_10685	0.72	-0.1
2,291,817	-	rpoE	OKGIIK_10685	0.72	-0.8
2,291,881	+	rpoE	OKGIIK_10685	0.82	+0.3
2,291,881	+	rpoE	OKGIIK_10685	0.82	-0.5
2,291,881	+	rpoE	OKGIIK_10685	0.82	+0.1
2,291,881	+	rpoE	OKGIIK_10685	0.82	+1.9
2,291,882	-	rpoE	OKGIIK_10685	0.82	+1.1
2,292,941	-				-1.1
2,292,967	-				+1.4
2,292,967	-				+0.0
2,292,967	-				-0.2
2,292,967	-				+0.6
2,292,967	-				+2.6