Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fliK and fliJ overlap by 4 nucleotides fliJ and fliI are separated by 18 nucleotides fliI and fliH overlap by 1 nucleotides fliH and fliG overlap by 8 nucleotides
BNILDI_15110: fliK - flagellar hook length control protein FliK, at 3,045,184 to 3,046,311
fliK
BNILDI_15115: fliJ - flagella biosynthesis chaperone FliJ, at 3,046,308 to 3,046,751
fliJ
BNILDI_15120: fliI - flagellum-specific ATP synthase FliI, at 3,046,770 to 3,048,143
fliI
BNILDI_15125: fliH - flagellar assembly protein FliH, at 3,048,143 to 3,048,829
fliH
BNILDI_15130: fliG - flagellar motor switch protein FliG, at 3,048,822 to 3,049,817
fliG
Position (kb)
3046
3047
3048
3049 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 3046.147 kb on - strand, within fliK at 3046.291 kb on + strand at 3046.584 kb on - strand, within fliJ at 3046.618 kb on + strand, within fliJ at 3046.771 kb on + strand at 3046.852 kb on + strand at 3046.915 kb on + strand, within fliI at 3047.633 kb on + strand, within fliI at 3047.688 kb on - strand, within fliI at 3047.793 kb on + strand, within fliI at 3048.069 kb on + strand at 3048.145 kb on - strand at 3048.305 kb on - strand, within fliH at 3048.829 kb on + strand at 3048.829 kb on + strand at 3048.829 kb on + strand at 3048.830 kb on - strand at 3048.830 kb on - strand at 3048.830 kb on - strand at 3048.830 kb on - strand at 3048.830 kb on - strand at 3048.833 kb on + strand at 3048.834 kb on - strand at 3048.834 kb on - strand at 3048.987 kb on - strand, within fliG at 3048.987 kb on - strand, within fliG at 3048.987 kb on - strand, within fliG at 3048.987 kb on - strand, within fliG
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 3,046,147 - fliK BNILDI_15110 0.85 +1.7 3,046,291 + -1.6 3,046,584 - fliJ BNILDI_15115 0.62 +1.5 3,046,618 + fliJ BNILDI_15115 0.70 +1.3 3,046,771 + +2.0 3,046,852 + +1.6 3,046,915 + fliI BNILDI_15120 0.11 +0.9 3,047,633 + fliI BNILDI_15120 0.63 +0.1 3,047,688 - fliI BNILDI_15120 0.67 +5.3 3,047,793 + fliI BNILDI_15120 0.74 +0.8 3,048,069 + -0.6 3,048,145 - +1.7 3,048,305 - fliH BNILDI_15125 0.24 +1.7 3,048,829 + +2.1 3,048,829 + +1.9 3,048,829 + -0.6 3,048,830 - +3.0 3,048,830 - +0.2 3,048,830 - +0.1 3,048,830 - +2.4 3,048,830 - +0.4 3,048,833 + +2.3 3,048,834 - +2.2 3,048,834 - +1.4 3,048,987 - fliG BNILDI_15130 0.17 +0.8 3,048,987 - fliG BNILDI_15130 0.17 +1.1 3,048,987 - fliG BNILDI_15130 0.17 +2.0 3,048,987 - fliG BNILDI_15130 0.17 +0.3
Or see this region's nucleotide sequence