Strain Fitness in Escherichia coli ECRC62 around BNILDI_09265

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
1,858,048	+	tsaA	BNILDI_09255	0.42	+0.2
1,858,157	+	tsaA	BNILDI_09255	0.57	+0.9
1,858,290	+	tsaA	BNILDI_09255	0.76	+0.5
1,858,291	-	tsaA	BNILDI_09255	0.76	-1.0
1,858,336	+	tsaA	BNILDI_09255	0.82	-0.9
1,858,337	-	tsaA	BNILDI_09255	0.82	-0.9
1,858,414	+				+0.6
1,858,415	-				-0.0
1,858,434	+				-1.7
1,858,435	-				-0.8
1,858,435	-				+2.9
1,858,475	-				+1.9
1,858,493	+				+1.3
1,858,493	+				-0.8
1,858,494	-				+1.5
1,858,506	+	rcsF	BNILDI_09260	0.12	-1.1
1,858,540	+	rcsF	BNILDI_09260	0.20	+0.3
1,858,547	+	rcsF	BNILDI_09260	0.22	-1.6
1,858,547	+	rcsF	BNILDI_09260	0.22	-1.0
1,858,547	+	rcsF	BNILDI_09260	0.22	-0.9
1,858,548	-	rcsF	BNILDI_09260	0.22	+0.1
1,858,631	-	rcsF	BNILDI_09260	0.43	-0.5
1,858,705	+	rcsF	BNILDI_09260	0.61	-0.3
1,858,836	-				+1.1
1,858,861	+				-0.5
1,858,861	+				+0.2
1,858,862	-				-0.1
1,858,862	-				+1.9
1,858,864	+				-0.3
1,858,877	+				+0.5
1,858,878	-				-0.2
1,858,912	+				+0.7
1,858,950	+				+1.4
1,858,951	-				-1.1
1,859,086	+	metQ	BNILDI_09265	0.13	-1.0
1,859,111	+	metQ	BNILDI_09265	0.16	-1.0
1,859,181	+	metQ	BNILDI_09265	0.25	-1.7
1,859,181	+	metQ	BNILDI_09265	0.25	-0.0
1,859,182	-	metQ	BNILDI_09265	0.25	-2.5
1,859,194	+	metQ	BNILDI_09265	0.26	-0.3
1,859,194	+	metQ	BNILDI_09265	0.26	-0.5
1,859,194	+	metQ	BNILDI_09265	0.26	-0.3
1,859,195	-	metQ	BNILDI_09265	0.26	-1.1
1,859,478	-	metQ	BNILDI_09265	0.61	-0.6
1,859,524	-	metQ	BNILDI_09265	0.67	-0.5
1,859,530	+	metQ	BNILDI_09265	0.68	-1.6
1,859,626	-	metQ	BNILDI_09265	0.79	-0.4
1,859,626	-	metQ	BNILDI_09265	0.79	-0.7
1,859,626	-	metQ	BNILDI_09265	0.79	-2.1
1,859,696	-	metQ	BNILDI_09265	0.88	+0.1
1,859,696	-	metQ	BNILDI_09265	0.88	-0.3
1,859,794	+				+0.9
1,859,814	+				-0.2
1,859,819	-				-1.8
1,859,882	+				+0.6
1,859,882	+				-0.2
1,859,883	-				-1.1
1,859,883	-				-0.3
1,859,917	+	metI	BNILDI_09270	0.13	+0.1
1,859,946	+	metI	BNILDI_09270	0.17	+1.3
1,859,946	+	metI	BNILDI_09270	0.17	+1.0
1,860,245	-	metI	BNILDI_09270	0.63	+0.3
1,860,281	-	metI	BNILDI_09270	0.68	+1.1
1,860,350	-	metI	BNILDI_09270	0.79	-0.1
1,860,372	+	metI	BNILDI_09270	0.82	-0.5
1,860,373	-	metI	BNILDI_09270	0.82	-0.6
1,860,373	-	metI	BNILDI_09270	0.82	-0.5
1,860,373	-	metI	BNILDI_09270	0.82	-0.3
1,860,487	+				-0.3
1,860,487	+				-0.0
1,860,488	-				-1.2
1,860,501	+				+0.5
1,860,501	+				-0.9
1,860,501	+				-0.2
1,860,508	-				+0.6
1,860,546	-				-0.4
1,860,621	-	metN	BNILDI_09275	0.14	-0.2
1,860,623	+	metN	BNILDI_09275	0.14	-1.2
1,860,623	+	metN	BNILDI_09275	0.14	+0.1
1,860,623	+	metN	BNILDI_09275	0.14	-1.7
1,860,623	+	metN	BNILDI_09275	0.14	-0.0
1,860,623	+	metN	BNILDI_09275	0.14	+1.9
1,860,624	-	metN	BNILDI_09275	0.14	+0.3
1,860,624	-	metN	BNILDI_09275	0.14	+1.9
1,860,725	+	metN	BNILDI_09275	0.24	+1.0
1,860,792	-	metN	BNILDI_09275	0.30	+0.0