Experiment: Bas61
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gorA and BNILDI_03225 are separated by 164 nucleotides BNILDI_03225 and arsR are separated by 307 nucleotides arsR and arsB are separated by 53 nucleotides
BNILDI_03220: gorA - glutathione-disulfide reductase, at 625,894 to 627,246
gorA
BNILDI_03225: BNILDI_03225 - hypothetical protein, at 627,411 to 627,584
_03225
BNILDI_03235: arsR - As(III)-sensing metalloregulatory transcriptional repressor ArsR, at 627,892 to 628,245
arsR
BNILDI_03240: arsB - arsenite/antimonite:H(+) antiporter ArsB, at 628,299 to 629,588
arsB
Position (kb) 627
628
629 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 626.943 kb on + strand, within gorA at 627.004 kb on + strand, within gorA at 627.005 kb on - strand, within gorA at 627.005 kb on - strand, within gorA at 627.007 kb on - strand, within gorA at 627.028 kb on + strand, within gorA at 627.028 kb on + strand, within gorA at 627.029 kb on - strand, within gorA at 627.029 kb on - strand, within gorA at 627.029 kb on - strand, within gorA at 627.195 kb on + strand at 627.195 kb on + strand at 627.260 kb on - strand at 627.265 kb on + strand at 627.266 kb on - strand at 627.266 kb on - strand at 627.266 kb on - strand at 627.284 kb on - strand at 627.287 kb on + strand at 627.288 kb on - strand at 627.348 kb on + strand at 627.349 kb on - strand at 627.349 kb on - strand at 627.375 kb on - strand at 627.455 kb on - strand, within BNILDI_03225 at 627.455 kb on - strand, within BNILDI_03225 at 627.589 kb on - strand at 627.606 kb on + strand at 627.606 kb on + strand at 627.606 kb on + strand at 627.793 kb on + strand at 627.794 kb on - strand at 627.891 kb on + strand at 627.892 kb on - strand at 627.959 kb on + strand, within arsR at 628.068 kb on - strand, within arsR at 628.089 kb on + strand, within arsR at 628.336 kb on + strand at 628.363 kb on + strand at 628.491 kb on - strand, within arsB at 628.583 kb on + strand, within arsB at 628.583 kb on + strand, within arsB at 628.646 kb on + strand, within arsB at 628.703 kb on + strand, within arsB at 628.822 kb on - strand, within arsB at 628.879 kb on + strand, within arsB at 628.879 kb on + strand, within arsB at 628.880 kb on - strand, within arsB at 628.880 kb on - strand, within arsB at 628.880 kb on - strand, within arsB at 628.880 kb on - strand, within arsB at 628.888 kb on - strand, within arsB at 628.902 kb on - strand, within arsB at 628.914 kb on + strand, within arsB at 628.964 kb on + strand, within arsB at 628.965 kb on - strand, within arsB at 628.991 kb on - strand, within arsB at 628.991 kb on - strand, within arsB at 629.071 kb on + strand, within arsB at 629.074 kb on + strand, within arsB at 629.074 kb on + strand, within arsB at 629.074 kb on + strand, within arsB at 629.074 kb on + strand, within arsB at 629.075 kb on - strand, within arsB at 629.166 kb on + strand, within arsB at 629.166 kb on + strand, within arsB at 629.166 kb on + strand, within arsB at 629.166 kb on + strand, within arsB at 629.167 kb on - strand, within arsB at 629.167 kb on - strand, within arsB at 629.167 kb on - strand, within arsB
Per-strain Table
Position Strand Gene LocusTag Fraction Bas61 remove 626,943 + gorA BNILDI_03220 0.78 -1.1 627,004 + gorA BNILDI_03220 0.82 -0.7 627,005 - gorA BNILDI_03220 0.82 -0.8 627,005 - gorA BNILDI_03220 0.82 +0.3 627,007 - gorA BNILDI_03220 0.82 +2.3 627,028 + gorA BNILDI_03220 0.84 -1.2 627,028 + gorA BNILDI_03220 0.84 +0.8 627,029 - gorA BNILDI_03220 0.84 -0.9 627,029 - gorA BNILDI_03220 0.84 +0.9 627,029 - gorA BNILDI_03220 0.84 -1.7 627,195 + +0.3 627,195 + -0.4 627,260 - +0.2 627,265 + +0.1 627,266 - +0.4 627,266 - +0.9 627,266 - -0.1 627,284 - -1.0 627,287 + -2.2 627,288 - -3.1 627,348 + +0.9 627,349 - -0.2 627,349 - -0.9 627,375 - -0.3 627,455 - BNILDI_03225 0.25 +0.2 627,455 - BNILDI_03225 0.25 -0.5 627,589 - +0.5 627,606 + -1.5 627,606 + -0.2 627,606 + -0.4 627,793 + +0.3 627,794 - +0.3 627,891 + -1.6 627,892 - +0.1 627,959 + arsR BNILDI_03235 0.19 +1.5 628,068 - arsR BNILDI_03235 0.50 -0.0 628,089 + arsR BNILDI_03235 0.56 +0.8 628,336 + -0.4 628,363 + -0.3 628,491 - arsB BNILDI_03240 0.15 +0.5 628,583 + arsB BNILDI_03240 0.22 +0.1 628,583 + arsB BNILDI_03240 0.22 +0.2 628,646 + arsB BNILDI_03240 0.27 -0.9 628,703 + arsB BNILDI_03240 0.31 -1.4 628,822 - arsB BNILDI_03240 0.41 +0.2 628,879 + arsB BNILDI_03240 0.45 -0.7 628,879 + arsB BNILDI_03240 0.45 -0.7 628,880 - arsB BNILDI_03240 0.45 +0.6 628,880 - arsB BNILDI_03240 0.45 -1.2 628,880 - arsB BNILDI_03240 0.45 +0.5 628,880 - arsB BNILDI_03240 0.45 -1.1 628,888 - arsB BNILDI_03240 0.46 -0.3 628,902 - arsB BNILDI_03240 0.47 +0.0 628,914 + arsB BNILDI_03240 0.48 +0.9 628,964 + arsB BNILDI_03240 0.52 +0.9 628,965 - arsB BNILDI_03240 0.52 +0.0 628,991 - arsB BNILDI_03240 0.54 -0.7 628,991 - arsB BNILDI_03240 0.54 -1.9 629,071 + arsB BNILDI_03240 0.60 +0.4 629,074 + arsB BNILDI_03240 0.60 -1.2 629,074 + arsB BNILDI_03240 0.60 +1.4 629,074 + arsB BNILDI_03240 0.60 +0.2 629,074 + arsB BNILDI_03240 0.60 -0.2 629,075 - arsB BNILDI_03240 0.60 -0.6 629,166 + arsB BNILDI_03240 0.67 -0.6 629,166 + arsB BNILDI_03240 0.67 +0.1 629,166 + arsB BNILDI_03240 0.67 +0.5 629,166 + arsB BNILDI_03240 0.67 +0.3 629,167 - arsB BNILDI_03240 0.67 +0.9 629,167 - arsB BNILDI_03240 0.67 -0.2 629,167 - arsB BNILDI_03240 0.67 +0.2
Or see this region's nucleotide sequence