Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04326

Experiment: T4 MOI1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04325 and OHPLBJKB_04326 are separated by 85 nucleotidesOHPLBJKB_04326 and OHPLBJKB_04327 overlap by 1 nucleotides OHPLBJKB_04325: OHPLBJKB_04325 - Phosphate-binding protein PstS, at 4,547,295 to 4,548,335 _04325 OHPLBJKB_04326: OHPLBJKB_04326 - Phosphate transport system permease protein PstC, at 4,548,421 to 4,549,380 _04326 OHPLBJKB_04327: OHPLBJKB_04327 - Phosphate transport system permease protein PstA, at 4,549,380 to 4,550,270 _04327 Position (kb) 4548 4549 4550Strain fitness (log2 ratio) -2 -1 0 1at 4547.436 kb on + strand, within OHPLBJKB_04325at 4547.436 kb on + strand, within OHPLBJKB_04325at 4547.456 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.466 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.476 kb on + strand, within OHPLBJKB_04325at 4547.494 kb on + strand, within OHPLBJKB_04325at 4547.513 kb on + strand, within OHPLBJKB_04325at 4547.660 kb on + strand, within OHPLBJKB_04325at 4547.679 kb on + strand, within OHPLBJKB_04325at 4547.852 kb on + strand, within OHPLBJKB_04325at 4547.861 kb on + strand, within OHPLBJKB_04325at 4547.866 kb on + strand, within OHPLBJKB_04325at 4547.955 kb on + strand, within OHPLBJKB_04325at 4548.011 kb on + strand, within OHPLBJKB_04325at 4548.122 kb on + strand, within OHPLBJKB_04325at 4548.122 kb on + strand, within OHPLBJKB_04325at 4548.123 kb on - strand, within OHPLBJKB_04325at 4548.125 kb on + strand, within OHPLBJKB_04325at 4548.125 kb on + strand, within OHPLBJKB_04325at 4548.302 kb on + strandat 4548.305 kb on + strandat 4548.333 kb on + strandat 4548.404 kb on + strandat 4548.415 kb on + strandat 4548.420 kb on + strandat 4548.531 kb on + strand, within OHPLBJKB_04326at 4548.792 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4548.867 kb on + strand, within OHPLBJKB_04326at 4549.177 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.201 kb on + strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.202 kb on - strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.203 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.218 kb on + strand, within OHPLBJKB_04326at 4549.311 kb on + strandat 4549.311 kb on + strandat 4549.312 kb on - strandat 4549.385 kb on + strandat 4549.525 kb on + strand, within OHPLBJKB_04327at 4549.525 kb on + strand, within OHPLBJKB_04327at 4549.556 kb on + strand, within OHPLBJKB_04327at 4549.556 kb on + strand, within OHPLBJKB_04327at 4549.698 kb on + strand, within OHPLBJKB_04327at 4549.698 kb on + strand, within OHPLBJKB_04327at 4549.718 kb on + strand, within OHPLBJKB_04327at 4549.718 kb on + strand, within OHPLBJKB_04327at 4549.941 kb on + strand, within OHPLBJKB_04327at 4550.141 kb on + strand, within OHPLBJKB_04327at 4550.352 kb on + strandat 4550.352 kb on + strandat 4550.352 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T4 MOI1
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4,547,436 + OHPLBJKB_04325 0.14 -1.3
4,547,436 + OHPLBJKB_04325 0.14 -1.1
4,547,456 + OHPLBJKB_04325 0.15 -0.7
4,547,466 + OHPLBJKB_04325 0.16 +0.1
4,547,466 + OHPLBJKB_04325 0.16 -0.2
4,547,466 + OHPLBJKB_04325 0.16 -2.3
4,547,466 + OHPLBJKB_04325 0.16 +0.6
4,547,466 + OHPLBJKB_04325 0.16 -1.0
4,547,476 + OHPLBJKB_04325 0.17 +0.8
4,547,476 + OHPLBJKB_04325 0.17 +0.4
4,547,476 + OHPLBJKB_04325 0.17 -0.6
4,547,476 + OHPLBJKB_04325 0.17 -0.8
4,547,476 + OHPLBJKB_04325 0.17 +1.0
4,547,494 + OHPLBJKB_04325 0.19 -1.9
4,547,513 + OHPLBJKB_04325 0.21 +0.1
4,547,660 + OHPLBJKB_04325 0.35 -0.4
4,547,679 + OHPLBJKB_04325 0.37 +0.2
4,547,852 + OHPLBJKB_04325 0.54 -1.1
4,547,861 + OHPLBJKB_04325 0.54 -1.7
4,547,866 + OHPLBJKB_04325 0.55 -0.6
4,547,955 + OHPLBJKB_04325 0.63 -1.1
4,548,011 + OHPLBJKB_04325 0.69 -0.4
4,548,122 + OHPLBJKB_04325 0.79 +0.4
4,548,122 + OHPLBJKB_04325 0.79 +1.0
4,548,123 - OHPLBJKB_04325 0.80 -0.3
4,548,125 + OHPLBJKB_04325 0.80 -0.1
4,548,125 + OHPLBJKB_04325 0.80 -1.7
4,548,302 + +0.0
4,548,305 + +0.6
4,548,333 + -0.8
4,548,404 + -0.6
4,548,415 + -1.1
4,548,420 + -0.6
4,548,531 + OHPLBJKB_04326 0.11 -0.6
4,548,792 + OHPLBJKB_04326 0.39 +0.4
4,548,867 + OHPLBJKB_04326 0.46 +0.6
4,548,867 + OHPLBJKB_04326 0.46 -0.7
4,549,177 + OHPLBJKB_04326 0.79 -0.3
4,549,201 + OHPLBJKB_04326 0.81 -0.3
4,549,201 + OHPLBJKB_04326 0.81 +0.2
4,549,201 + OHPLBJKB_04326 0.81 -0.5
4,549,201 + OHPLBJKB_04326 0.81 -2.0
4,549,201 + OHPLBJKB_04326 0.81 -0.7
4,549,202 - OHPLBJKB_04326 0.81 -0.8
4,549,202 - OHPLBJKB_04326 0.81 +0.4
4,549,203 + OHPLBJKB_04326 0.81 +0.3
4,549,203 + OHPLBJKB_04326 0.81 -0.1
4,549,203 + OHPLBJKB_04326 0.81 -0.6
4,549,218 + OHPLBJKB_04326 0.83 -2.1
4,549,218 + OHPLBJKB_04326 0.83 -1.9
4,549,218 + OHPLBJKB_04326 0.83 -1.3
4,549,311 + +0.0
4,549,311 + -0.3
4,549,312 - -0.6
4,549,385 + -0.9
4,549,525 + OHPLBJKB_04327 0.16 -0.6
4,549,525 + OHPLBJKB_04327 0.16 +0.2
4,549,556 + OHPLBJKB_04327 0.20 -0.0
4,549,556 + OHPLBJKB_04327 0.20 -1.3
4,549,698 + OHPLBJKB_04327 0.36 -1.8
4,549,698 + OHPLBJKB_04327 0.36 +0.0
4,549,718 + OHPLBJKB_04327 0.38 +0.8
4,549,718 + OHPLBJKB_04327 0.38 -1.8
4,549,941 + OHPLBJKB_04327 0.63 +0.0
4,550,141 + OHPLBJKB_04327 0.85 +0.3
4,550,352 + +0.0
4,550,352 + +0.2
4,550,352 + -0.1

Or see this region's nucleotide sequence