Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_03807

Experiment: Glycogen from bovine liver 2.5 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBACOVA_03806 and BACOVA_03807 are separated by 317 nucleotidesBACOVA_03807 and BACOVA_03808 are separated by 17 nucleotides BACOVA_03806: BACOVA_03806 - putative cytochrome c-type biogenesis protein CcsB, at 146,869 to 148,932 _03806 BACOVA_03807: BACOVA_03807 - transcriptional regulator, TetR family, at 149,250 to 149,858 _03807 BACOVA_03808: BACOVA_03808 - ABC transporter, ATP-binding protein, at 149,876 to 151,612 _03808 Position (kb) 149 150Strain fitness (log2 ratio) -2 -1 0 1 2at 148.290 kb on + strand, within BACOVA_03806at 148.291 kb on - strand, within BACOVA_03806at 148.318 kb on - strand, within BACOVA_03806at 148.485 kb on + strand, within BACOVA_03806at 148.485 kb on + strand, within BACOVA_03806at 148.513 kb on + strand, within BACOVA_03806at 148.513 kb on + strand, within BACOVA_03806at 148.514 kb on - strand, within BACOVA_03806at 148.521 kb on - strand, within BACOVA_03806at 148.521 kb on - strand, within BACOVA_03806at 148.556 kb on + strand, within BACOVA_03806at 148.556 kb on + strand, within BACOVA_03806at 148.557 kb on - strand, within BACOVA_03806at 148.608 kb on - strand, within BACOVA_03806at 148.729 kb on + strandat 148.755 kb on - strandat 148.780 kb on + strandat 148.781 kb on - strandat 148.840 kb on - strandat 148.840 kb on - strandat 148.843 kb on + strandat 148.844 kb on - strandat 148.844 kb on - strandat 148.844 kb on - strandat 148.844 kb on - strandat 148.872 kb on - strandat 148.914 kb on + strandat 148.914 kb on + strandat 148.915 kb on - strandat 148.919 kb on - strandat 148.940 kb on + strandat 148.940 kb on + strandat 148.941 kb on - strandat 148.941 kb on - strandat 148.942 kb on + strandat 148.943 kb on - strandat 148.943 kb on - strandat 148.943 kb on - strandat 148.944 kb on + strandat 148.948 kb on + strandat 148.951 kb on + strandat 149.030 kb on + strandat 149.044 kb on + strandat 149.044 kb on + strandat 149.044 kb on + strandat 149.045 kb on - strandat 149.047 kb on - strandat 149.049 kb on + strandat 149.054 kb on - strandat 149.136 kb on + strandat 149.136 kb on + strandat 149.136 kb on + strandat 149.137 kb on - strandat 149.161 kb on + strandat 149.162 kb on - strandat 149.171 kb on - strandat 149.171 kb on - strandat 149.176 kb on - strandat 149.222 kb on + strandat 149.228 kb on + strandat 149.229 kb on - strandat 149.294 kb on + strandat 149.295 kb on - strandat 149.297 kb on - strandat 149.379 kb on - strand, within BACOVA_03807at 149.399 kb on + strand, within BACOVA_03807at 149.409 kb on + strand, within BACOVA_03807at 149.411 kb on + strand, within BACOVA_03807at 149.411 kb on + strand, within BACOVA_03807at 149.411 kb on + strand, within BACOVA_03807at 149.417 kb on + strand, within BACOVA_03807at 149.417 kb on + strand, within BACOVA_03807at 149.418 kb on - strand, within BACOVA_03807at 149.481 kb on - strand, within BACOVA_03807at 149.482 kb on + strand, within BACOVA_03807at 149.571 kb on - strand, within BACOVA_03807at 149.620 kb on - strand, within BACOVA_03807at 149.648 kb on - strand, within BACOVA_03807at 149.655 kb on - strand, within BACOVA_03807at 149.655 kb on - strand, within BACOVA_03807at 149.660 kb on - strand, within BACOVA_03807at 149.674 kb on - strand, within BACOVA_03807at 149.697 kb on + strand, within BACOVA_03807at 149.697 kb on + strand, within BACOVA_03807at 149.719 kb on + strand, within BACOVA_03807at 149.725 kb on + strand, within BACOVA_03807at 149.725 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.729 kb on + strand, within BACOVA_03807at 149.733 kb on - strand, within BACOVA_03807at 149.761 kb on - strand, within BACOVA_03807at 149.771 kb on + strand, within BACOVA_03807at 149.772 kb on - strand, within BACOVA_03807at 149.859 kb on - strandat 149.859 kb on - strandat 149.871 kb on - strandat 149.885 kb on - strandat 149.891 kb on - strandat 149.981 kb on + strandat 149.981 kb on + strandat 149.985 kb on - strandat 150.046 kb on + strandat 150.065 kb on - strand, within BACOVA_03808at 150.065 kb on - strand, within BACOVA_03808at 150.065 kb on - strand, within BACOVA_03808at 150.110 kb on - strand, within BACOVA_03808at 150.166 kb on + strand, within BACOVA_03808at 150.167 kb on - strand, within BACOVA_03808at 150.167 kb on - strand, within BACOVA_03808at 150.222 kb on + strand, within BACOVA_03808at 150.238 kb on + strand, within BACOVA_03808at 150.238 kb on + strand, within BACOVA_03808at 150.295 kb on + strand, within BACOVA_03808at 150.328 kb on + strand, within BACOVA_03808at 150.350 kb on + strand, within BACOVA_03808at 150.350 kb on + strand, within BACOVA_03808at 150.372 kb on + strand, within BACOVA_03808at 150.372 kb on + strand, within BACOVA_03808at 150.547 kb on + strand, within BACOVA_03808at 150.574 kb on - strand, within BACOVA_03808at 150.584 kb on + strand, within BACOVA_03808at 150.671 kb on - strand, within BACOVA_03808at 150.676 kb on + strand, within BACOVA_03808at 150.757 kb on + strand, within BACOVA_03808at 150.757 kb on + strand, within BACOVA_03808at 150.761 kb on + strand, within BACOVA_03808at 150.764 kb on - strand, within BACOVA_03808at 150.769 kb on - strand, within BACOVA_03808at 150.772 kb on + strand, within BACOVA_03808at 150.821 kb on - strand, within BACOVA_03808at 150.821 kb on - strand, within BACOVA_03808at 150.845 kb on + strand, within BACOVA_03808

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycogen from bovine liver 2.5 mg/mL (C)
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148,290 + BACOVA_03806 0.69 -0.7
148,291 - BACOVA_03806 0.69 -2.2
148,318 - BACOVA_03806 0.70 -1.5
148,485 + BACOVA_03806 0.78 +0.1
148,485 + BACOVA_03806 0.78 +1.0
148,513 + BACOVA_03806 0.80 -0.4
148,513 + BACOVA_03806 0.80 -1.2
148,514 - BACOVA_03806 0.80 -0.2
148,521 - BACOVA_03806 0.80 -0.9
148,521 - BACOVA_03806 0.80 +0.7
148,556 + BACOVA_03806 0.82 -0.2
148,556 + BACOVA_03806 0.82 +1.0
148,557 - BACOVA_03806 0.82 -0.0
148,608 - BACOVA_03806 0.84 +1.3
148,729 + -0.3
148,755 - -1.1
148,780 + +0.6
148,781 - -0.7
148,840 - -1.4
148,840 - -0.4
148,843 + -1.4
148,844 - -1.6
148,844 - +0.5
148,844 - +0.7
148,844 - +0.5
148,872 - -0.2
148,914 + +0.6
148,914 + +1.2
148,915 - -1.4
148,919 - +0.4
148,940 + -0.0
148,940 + -1.3
148,941 - -0.1
148,941 - +0.6
148,942 + +1.6
148,943 - -0.4
148,943 - -0.9
148,943 - -0.5
148,944 + -0.5
148,948 + -0.1
148,951 + +1.7
149,030 + +0.6
149,044 + -0.1
149,044 + +0.0
149,044 + +0.8
149,045 - -1.1
149,047 - +1.1
149,049 + -1.4
149,054 - -1.1
149,136 + +0.1
149,136 + -0.9
149,136 + +0.4
149,137 - -0.4
149,161 + -0.3
149,162 - +1.4
149,171 - +0.8
149,171 - -2.3
149,176 - +0.4
149,222 + +0.5
149,228 + -0.3
149,229 - -0.6
149,294 + +0.0
149,295 - -0.3
149,297 - -0.9
149,379 - BACOVA_03807 0.21 +1.5
149,399 + BACOVA_03807 0.24 -0.3
149,409 + BACOVA_03807 0.26 -1.7
149,411 + BACOVA_03807 0.26 -0.1
149,411 + BACOVA_03807 0.26 -1.0
149,411 + BACOVA_03807 0.26 -0.6
149,417 + BACOVA_03807 0.27 +0.6
149,417 + BACOVA_03807 0.27 -1.1
149,418 - BACOVA_03807 0.28 -0.6
149,481 - BACOVA_03807 0.38 +0.1
149,482 + BACOVA_03807 0.38 +2.5
149,571 - BACOVA_03807 0.53 -0.5
149,620 - BACOVA_03807 0.61 -1.5
149,648 - BACOVA_03807 0.65 +0.9
149,655 - BACOVA_03807 0.67 +0.3
149,655 - BACOVA_03807 0.67 +0.0
149,660 - BACOVA_03807 0.67 +0.2
149,674 - BACOVA_03807 0.70 +0.3
149,697 + BACOVA_03807 0.73 +0.5
149,697 + BACOVA_03807 0.73 -0.1
149,719 + BACOVA_03807 0.77 +0.2
149,725 + BACOVA_03807 0.78 +0.7
149,725 + BACOVA_03807 0.78 +0.1
149,729 + BACOVA_03807 0.79 +0.2
149,729 + BACOVA_03807 0.79 +0.3
149,729 + BACOVA_03807 0.79 -1.4
149,729 + BACOVA_03807 0.79 +1.1
149,729 + BACOVA_03807 0.79 -1.4
149,729 + BACOVA_03807 0.79 -0.8
149,729 + BACOVA_03807 0.79 -0.1
149,733 - BACOVA_03807 0.79 -0.9
149,761 - BACOVA_03807 0.84 +0.4
149,771 + BACOVA_03807 0.86 +0.7
149,772 - BACOVA_03807 0.86 -0.6
149,859 - +1.4
149,859 - +0.7
149,871 - +0.8
149,885 - -1.1
149,891 - +0.9
149,981 + +0.5
149,981 + -0.3
149,985 - +0.2
150,046 + -0.8
150,065 - BACOVA_03808 0.11 -1.5
150,065 - BACOVA_03808 0.11 +0.4
150,065 - BACOVA_03808 0.11 +0.8
150,110 - BACOVA_03808 0.13 +0.2
150,166 + BACOVA_03808 0.17 -1.3
150,167 - BACOVA_03808 0.17 +1.0
150,167 - BACOVA_03808 0.17 +0.6
150,222 + BACOVA_03808 0.20 +0.2
150,238 + BACOVA_03808 0.21 +0.5
150,238 + BACOVA_03808 0.21 -0.4
150,295 + BACOVA_03808 0.24 -0.6
150,328 + BACOVA_03808 0.26 +0.8
150,350 + BACOVA_03808 0.27 -0.8
150,350 + BACOVA_03808 0.27 -0.6
150,372 + BACOVA_03808 0.29 -0.4
150,372 + BACOVA_03808 0.29 +1.0
150,547 + BACOVA_03808 0.39 -0.0
150,574 - BACOVA_03808 0.40 -0.0
150,584 + BACOVA_03808 0.41 -0.3
150,671 - BACOVA_03808 0.46 +1.1
150,676 + BACOVA_03808 0.46 -0.4
150,757 + BACOVA_03808 0.51 -0.9
150,757 + BACOVA_03808 0.51 -0.9
150,761 + BACOVA_03808 0.51 -2.1
150,764 - BACOVA_03808 0.51 +2.0
150,769 - BACOVA_03808 0.51 -0.5
150,772 + BACOVA_03808 0.52 +0.1
150,821 - BACOVA_03808 0.54 -0.0
150,821 - BACOVA_03808 0.54 -0.1
150,845 + BACOVA_03808 0.56 +0.0

Or see this region's nucleotide sequence