Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03705

Experiment: NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum
1,144,150	-		MPMX19_03704	0.45	-0.1
1,144,150	-		MPMX19_03704	0.45	+0.1
1,144,150	-		MPMX19_03704	0.45	-1.1
1,144,150	-		MPMX19_03704	0.45	-1.4
1,144,154	+		MPMX19_03704	0.46	-0.3
1,144,154	+		MPMX19_03704	0.46	+0.1
1,144,154	+		MPMX19_03704	0.46	+1.7
1,144,154	+		MPMX19_03704	0.46	-0.6
1,144,154	+		MPMX19_03704	0.46	+0.7
1,144,154	+		MPMX19_03704	0.46	-2.8
1,144,154	+		MPMX19_03704	0.46	+0.7
1,144,154	+		MPMX19_03704	0.46	+0.3
1,144,154	+		MPMX19_03704	0.46	-0.1
1,144,154	+		MPMX19_03704	0.46	-0.5
1,144,154	+		MPMX19_03704	0.46	-1.1
1,144,154	+		MPMX19_03704	0.46	-0.3
1,144,154	+		MPMX19_03704	0.46	-0.6
1,144,154	+		MPMX19_03704	0.46	-0.4
1,144,154	+		MPMX19_03704	0.46	+0.1
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,154	+		MPMX19_03704	0.46	+1.1
1,144,154	+		MPMX19_03704	0.46	+0.4
1,144,154	+		MPMX19_03704	0.46	-0.1
1,144,154	+		MPMX19_03704	0.46	-1.0
1,144,154	+		MPMX19_03704	0.46	-1.6
1,144,154	+		MPMX19_03704	0.46	-0.5
1,144,154	+		MPMX19_03704	0.46	+0.2
1,144,154	+		MPMX19_03704	0.46	-0.8
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,154	+		MPMX19_03704	0.46	-1.4
1,144,154	+		MPMX19_03704	0.46	-2.8
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,154	+		MPMX19_03704	0.46	-2.6
1,144,154	+		MPMX19_03704	0.46	-2.2
1,144,154	+		MPMX19_03704	0.46	-1.7
1,144,154	+		MPMX19_03704	0.46	+0.2
1,144,154	+		MPMX19_03704	0.46	-0.9
1,144,155	-		MPMX19_03704	0.46	-0.7
1,144,155	-		MPMX19_03704	0.46	+1.1
1,144,155	-		MPMX19_03704	0.46	+0.6
1,144,155	-		MPMX19_03704	0.46	-1.7
1,144,155	-		MPMX19_03704	0.46	-1.0
1,144,155	-		MPMX19_03704	0.46	+1.0
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	-1.6
1,144,155	-		MPMX19_03704	0.46	+0.2
1,144,155	-		MPMX19_03704	0.46	-0.3
1,144,155	-		MPMX19_03704	0.46	-0.5
1,144,155	-		MPMX19_03704	0.46	+0.1
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	-0.1
1,144,155	-		MPMX19_03704	0.46	+0.8
1,144,155	-		MPMX19_03704	0.46	-0.9
1,144,155	-		MPMX19_03704	0.46	+0.9
1,144,155	-		MPMX19_03704	0.46	-0.6
1,144,155	-		MPMX19_03704	0.46	+0.8
1,144,155	-		MPMX19_03704	0.46	-0.5
1,144,155	-		MPMX19_03704	0.46	-1.3
1,144,155	-		MPMX19_03704	0.46	-0.3
1,144,155	-		MPMX19_03704	0.46	-1.3
1,144,155	-		MPMX19_03704	0.46	-0.7
1,144,157	+		MPMX19_03704	0.46	-0.3
1,144,157	+		MPMX19_03704	0.46	+0.8
1,144,157	+		MPMX19_03704	0.46	-1.8
1,144,157	+		MPMX19_03704	0.46	-0.4
1,144,157	+		MPMX19_03704	0.46	+1.1
1,144,157	+		MPMX19_03704	0.46	+1.5
1,144,158	-		MPMX19_03704	0.46	+1.3
1,144,158	-		MPMX19_03704	0.46	-0.7
1,144,158	-		MPMX19_03704	0.46	-1.0
1,144,158	-		MPMX19_03704	0.46	-0.7
1,144,158	-		MPMX19_03704	0.46	-0.9
1,144,158	-		MPMX19_03704	0.46	-1.3
1,144,158	-		MPMX19_03704	0.46	+1.3
1,144,158	-		MPMX19_03704	0.46	-0.6
1,144,520	+		MPMX19_03704	0.88	+0.6
1,144,520	+		MPMX19_03704	0.88	-1.0
1,144,521	-		MPMX19_03704	0.88	-2.9
1,144,556	+				-0.3
1,144,713	+				+1.9
1,144,713	+				+0.9
1,144,713	+				-1.1
1,144,713	+				+0.8
1,144,713	+				-1.5
1,144,714	-				-1.0
1,144,714	-				+0.6
1,144,714	-				-0.0
1,144,714	-				-0.8
1,144,714	-				-0.5
1,144,714	-				+1.0
1,144,938	+		MPMX19_03705	0.35	-1.0
1,144,938	+		MPMX19_03705	0.35	-0.4
1,144,938	+		MPMX19_03705	0.35	+1.5
1,144,938	+		MPMX19_03705	0.35	-0.1
1,144,939	-		MPMX19_03705	0.35	+1.1
1,144,939	-		MPMX19_03705	0.35	-0.4
1,144,939	-		MPMX19_03705	0.35	-0.3
1,145,022	+		MPMX19_03705	0.47	-1.5
1,145,022	+		MPMX19_03705	0.47	-0.3
1,145,022	+		MPMX19_03705	0.47	-1.1
1,145,022	+		MPMX19_03705	0.47	+1.1
1,145,022	+		MPMX19_03705	0.47	+0.4
1,145,022	+		MPMX19_03705	0.47	-0.9
1,145,022	+		MPMX19_03705	0.47	+0.9
1,145,023	-		MPMX19_03705	0.47	+0.0
1,145,023	-		MPMX19_03705	0.47	-0.2
1,145,023	-		MPMX19_03705	0.47	-1.5
1,145,023	-		MPMX19_03705	0.47	-1.0
1,145,023	-		MPMX19_03705	0.47	+0.7
1,145,023	-		MPMX19_03705	0.47	-0.3
1,145,023	-		MPMX19_03705	0.47	+0.3
1,145,023	-		MPMX19_03705	0.47	-1.1
1,145,023	-		MPMX19_03705	0.47	+0.2
1,145,023	-		MPMX19_03705	0.47	-2.0
1,145,023	-		MPMX19_03705	0.47	-2.3
1,145,217	+		MPMX19_03705	0.77	-2.2
1,145,232	+		MPMX19_03705	0.79	-0.2
1,145,232	+		MPMX19_03705	0.79	-2.6
1,145,232	+		MPMX19_03705	0.79	-0.8
1,145,233	-		MPMX19_03705	0.79	-0.9
1,145,233	-		MPMX19_03705	0.79	+1.3
1,145,280	+		MPMX19_03705	0.86	-1.3
1,145,280	+		MPMX19_03705	0.86	-1.2
1,145,280	+		MPMX19_03705	0.86	-0.9
1,145,280	+		MPMX19_03705	0.86	-0.6
1,145,281	-		MPMX19_03705	0.86	-0.8
1,145,281	-		MPMX19_03705	0.86	-0.4
1,145,281	-		MPMX19_03705	0.86	-1.1
1,145,281	-		MPMX19_03705	0.86	-1.6
1,145,281	-		MPMX19_03705	0.86	-0.9
1,145,281	-		MPMX19_03705	0.86	-0.6
1,145,281	-		MPMX19_03705	0.86	-0.8
1,145,281	-		MPMX19_03705	0.86	-1.2
1,145,301	+		MPMX19_03705	0.89	-1.3
1,145,301	+		MPMX19_03705	0.89	-1.2
1,145,301	+		MPMX19_03705	0.89	-0.6
1,145,301	+		MPMX19_03705	0.89	+0.4
1,145,301	+		MPMX19_03705	0.89	+1.3
1,145,301	+		MPMX19_03705	0.89	-1.1
1,145,302	-		MPMX19_03705	0.89	-2.6
1,145,302	-		MPMX19_03705	0.89	-0.9
1,145,391	+				-0.0
1,145,391	+				+0.6
1,145,391	+				-2.1
1,145,391	+				-0.4
1,145,392	-				-0.5
1,145,392	-				-0.4
1,145,392	-				+0.7
1,145,392	-				+2.7
1,145,392	-				-0.2
1,145,392	-				+0.5
1,145,392	-				+0.5
1,145,392	-				-1.4
1,145,392	-				+0.1
1,145,562	+		MPMX19_03706	0.27	-1.1
1,145,562	+		MPMX19_03706	0.27	-1.2
1,145,562	+		MPMX19_03706	0.27	+0.2
1,145,562	+		MPMX19_03706	0.27	-0.9
1,145,563	-		MPMX19_03706	0.27	+0.1
1,145,563	-		MPMX19_03706	0.27	-2.0
1,145,563	-		MPMX19_03706	0.27	-1.8
1,145,613	+		MPMX19_03706	0.34	+0.9
1,145,613	+		MPMX19_03706	0.34	-1.0
1,145,613	+		MPMX19_03706	0.34	-0.2
1,145,613	+		MPMX19_03706	0.34	+0.7
1,145,613	+		MPMX19_03706	0.34	-0.1
1,145,613	+		MPMX19_03706	0.34	+0.1
1,145,613	+		MPMX19_03706	0.34	-1.3
1,145,613	+		MPMX19_03706	0.34	+0.1
1,145,613	+		MPMX19_03706	0.34	+1.2
1,145,614	-		MPMX19_03706	0.34	-0.6
1,145,614	-		MPMX19_03706	0.34	+1.2
1,145,614	-		MPMX19_03706	0.34	-1.1
1,145,614	-		MPMX19_03706	0.34	-2.5
1,145,614	-		MPMX19_03706	0.34	+0.4
1,145,614	-		MPMX19_03706	0.34	+0.4
1,145,614	-		MPMX19_03706	0.34	-0.3
1,145,614	-		MPMX19_03706	0.34	-0.6
1,145,614	-		MPMX19_03706	0.34	+0.7
1,145,614	-		MPMX19_03706	0.34	-2.3
1,145,614	-		MPMX19_03706	0.34	-0.0
1,145,614	-		MPMX19_03706	0.34	+0.1
1,145,614	-		MPMX19_03706	0.34	-1.8
1,145,614	-		MPMX19_03706	0.34	-0.2
1,145,614	-		MPMX19_03706	0.34	-0.1
1,145,614	-		MPMX19_03706	0.34	-0.1
1,145,616	+		MPMX19_03706	0.35	+0.3
1,145,616	+		MPMX19_03706	0.35	-0.8
1,145,616	+		MPMX19_03706	0.35	+0.2
1,145,616	+		MPMX19_03706	0.35	+0.3
1,145,616	+		MPMX19_03706	0.35	-0.5
1,145,616	+		MPMX19_03706	0.35	-0.6
1,145,616	+		MPMX19_03706	0.35	-1.5
1,145,616	+		MPMX19_03706	0.35	+0.2
1,145,616	+		MPMX19_03706	0.35	-1.0
1,145,616	+		MPMX19_03706	0.35	-0.0
1,145,616	+		MPMX19_03706	0.35	-0.7
1,145,617	-		MPMX19_03706	0.35	-2.8
1,145,617	-		MPMX19_03706	0.35	-0.2
1,145,617	-		MPMX19_03706	0.35	-0.6
1,145,617	-		MPMX19_03706	0.35	-0.6
1,145,617	-		MPMX19_03706	0.35	+0.6
1,145,697	+		MPMX19_03706	0.47	-1.8
1,145,698	-		MPMX19_03706	0.47	-1.1
1,145,698	-		MPMX19_03706	0.47	-1.8
1,145,698	-		MPMX19_03706	0.47	-0.7
1,145,910	+		MPMX19_03706	0.79	-0.3
1,145,910	+		MPMX19_03706	0.79	-0.5
1,145,910	+		MPMX19_03706	0.79	-1.0
1,145,910	+		MPMX19_03706	0.79	-0.6
1,145,910	+		MPMX19_03706	0.79	-0.2
1,145,910	+		MPMX19_03706	0.79	+0.2
1,145,910	+		MPMX19_03706	0.79	-1.1
1,145,910	+		MPMX19_03706	0.79	-0.2
1,145,910	+		MPMX19_03706	0.79	+0.7
1,145,911	-		MPMX19_03706	0.79	-0.5
1,145,911	-		MPMX19_03706	0.79	+0.3
1,145,911	-		MPMX19_03706	0.79	-0.2
1,145,911	-		MPMX19_03706	0.79	-1.8
1,145,911	-		MPMX19_03706	0.79	+0.7
1,145,911	-		MPMX19_03706	0.79	+1.1
1,145,911	-		MPMX19_03706	0.79	+0.7
1,145,911	-		MPMX19_03706	0.79	-1.4
1,145,911	-		MPMX19_03706	0.79	-1.1
1,145,937	+		MPMX19_03706	0.83	+0.1
1,145,937	+		MPMX19_03706	0.83	-2.1
1,145,937	+		MPMX19_03706	0.83	+0.4
1,145,937	+		MPMX19_03706	0.83	-1.6
1,145,937	+		MPMX19_03706	0.83	-0.6
1,145,937	+		MPMX19_03706	0.83	-2.8
1,145,938	-		MPMX19_03706	0.83	-1.3
1,145,938	-		MPMX19_03706	0.83	+0.5
1,145,938	-		MPMX19_03706	0.83	-0.8
1,145,938	-		MPMX19_03706	0.83	+0.2
1,145,938	-		MPMX19_03706	0.83	+0.6
1,145,938	-		MPMX19_03706	0.83	-0.2
1,145,940	+		MPMX19_03706	0.83	-1.5
1,145,940	+		MPMX19_03706	0.83	+0.6
1,145,941	-		MPMX19_03706	0.83	+1.0
1,145,941	-		MPMX19_03706	0.83	-2.4
1,145,979	+		MPMX19_03706	0.89	-0.7
1,145,980	-		MPMX19_03706	0.89	-0.2
1,145,994	+				-0.9
1,145,994	+				-0.5
1,145,994	+				-0.6
1,145,994	+				-1.2
1,145,995	-				-1.1
1,146,090	+				-1.3
1,146,091	-				+0.3
1,146,368	+		MPMX19_03707	0.35	-0.6
1,146,369	-		MPMX19_03707	0.35	+0.1