Strain Fitness in Escherichia coli ECRC102 around NIAGMN_20660

Experiment: Bas61

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bas61
4,079,492	+	nuoI	NIAGMN_20645	0.81	-0.1
4,079,493	-	nuoI	NIAGMN_20645	0.81	-0.5
4,079,494	+	nuoI	NIAGMN_20645	0.82	-0.1
4,079,495	-	nuoI	NIAGMN_20645	0.82	-1.0
4,079,515	+	nuoI	NIAGMN_20645	0.85	+0.0
4,079,536	+	nuoI	NIAGMN_20645	0.89	+0.5
4,079,536	+	nuoI	NIAGMN_20645	0.89	+0.5
4,079,592	-				-0.1
4,079,620	+				-1.1
4,079,620	+				+0.5
4,079,620	+				-0.1
4,079,621	-				+1.5
4,079,621	-				+0.5
4,079,622	+				-0.1
4,079,623	-				+0.2
4,079,642	+				-0.5
4,079,642	+				-0.1
4,079,642	+				+1.5
4,079,642	+				+1.5
4,079,642	+				-2.3
4,079,643	-				-0.3
4,079,682	-	nuoJ	NIAGMN_20650	0.14	-0.1
4,079,704	-	nuoJ	NIAGMN_20650	0.18	+2.5
4,079,749	+	nuoJ	NIAGMN_20650	0.26	+0.1
4,079,749	+	nuoJ	NIAGMN_20650	0.26	-0.1
4,079,750	-	nuoJ	NIAGMN_20650	0.26	+1.5
4,079,793	+	nuoJ	NIAGMN_20650	0.34	+1.5
4,079,793	+	nuoJ	NIAGMN_20650	0.34	+1.5
4,079,794	-	nuoJ	NIAGMN_20650	0.34	-0.7
4,079,794	-	nuoJ	NIAGMN_20650	0.34	-0.1
4,079,982	+	nuoJ	NIAGMN_20650	0.68	-0.1
4,079,982	+	nuoJ	NIAGMN_20650	0.68	+1.5
4,079,994	+	nuoJ	NIAGMN_20650	0.70	+0.5
4,079,995	-	nuoJ	NIAGMN_20650	0.70	+0.5
4,079,997	+	nuoJ	NIAGMN_20650	0.71	+1.5
4,080,017	+	nuoJ	NIAGMN_20650	0.74	+0.9
4,080,039	+	nuoJ	NIAGMN_20650	0.78	+0.8
4,080,039	+	nuoJ	NIAGMN_20650	0.78	+0.1
4,080,039	+	nuoJ	NIAGMN_20650	0.78	-0.1
4,080,040	-	nuoJ	NIAGMN_20650	0.78	+0.5
4,080,040	-	nuoJ	NIAGMN_20650	0.78	-1.5
4,080,040	-	nuoJ	NIAGMN_20650	0.78	-0.1
4,080,117	+				-1.1
4,080,166	+				+1.5
4,080,166	+				-0.1
4,080,245	+	nuoK	NIAGMN_20655	0.29	+1.5
4,080,339	+	nuoK	NIAGMN_20655	0.60	-0.9
4,080,339	+	nuoK	NIAGMN_20655	0.60	-1.1
4,080,339	+	nuoK	NIAGMN_20655	0.60	-0.9
4,080,339	+	nuoK	NIAGMN_20655	0.60	+0.1
4,080,339	+	nuoK	NIAGMN_20655	0.60	+0.5
4,080,339	+	nuoK	NIAGMN_20655	0.60	-1.0
4,080,339	+	nuoK	NIAGMN_20655	0.60	-0.1
4,080,339	+	nuoK	NIAGMN_20655	0.60	-1.1
4,080,340	-	nuoK	NIAGMN_20655	0.61	-0.5
4,080,340	-	nuoK	NIAGMN_20655	0.61	-0.5
4,080,340	-	nuoK	NIAGMN_20655	0.61	+1.1
4,080,340	-	nuoK	NIAGMN_20655	0.61	+0.5
4,080,439	+				+0.5
4,080,632	+				+0.7
4,080,632	+				-1.5
4,080,685	+	nuoL	NIAGMN_20660	0.12	-0.7
4,080,758	+	nuoL	NIAGMN_20660	0.16	-0.3
4,080,758	+	nuoL	NIAGMN_20660	0.16	-2.1
4,080,758	+	nuoL	NIAGMN_20660	0.16	+1.5
4,080,758	+	nuoL	NIAGMN_20660	0.16	-1.1
4,080,759	-	nuoL	NIAGMN_20660	0.17	-0.1
4,080,759	-	nuoL	NIAGMN_20660	0.17	+1.5
4,080,770	+	nuoL	NIAGMN_20660	0.17	+0.5
4,080,771	-	nuoL	NIAGMN_20660	0.17	-0.1
4,080,771	-	nuoL	NIAGMN_20660	0.17	+1.5
4,080,771	-	nuoL	NIAGMN_20660	0.17	+1.5
4,080,772	+	nuoL	NIAGMN_20660	0.17	-0.5
4,080,772	+	nuoL	NIAGMN_20660	0.17	+1.5
4,080,791	+	nuoL	NIAGMN_20660	0.18	+1.5
4,080,809	+	nuoL	NIAGMN_20660	0.19	+0.5
4,080,809	+	nuoL	NIAGMN_20660	0.19	+0.5
4,080,923	+	nuoL	NIAGMN_20660	0.25	+1.0
4,080,923	+	nuoL	NIAGMN_20660	0.25	-0.3
4,080,927	-	nuoL	NIAGMN_20660	0.26	-0.5
4,081,019	+	nuoL	NIAGMN_20660	0.31	+0.5
4,081,090	+	nuoL	NIAGMN_20660	0.34	+0.1
4,081,090	+	nuoL	NIAGMN_20660	0.34	-2.4
4,081,091	-	nuoL	NIAGMN_20660	0.35	+0.5
4,081,091	-	nuoL	NIAGMN_20660	0.35	+0.5
4,081,138	+	nuoL	NIAGMN_20660	0.37	+1.5
4,081,138	+	nuoL	NIAGMN_20660	0.37	+0.5
4,081,139	-	nuoL	NIAGMN_20660	0.37	+3.0
4,081,383	-	nuoL	NIAGMN_20660	0.50	-1.5
4,081,407	-	nuoL	NIAGMN_20660	0.52	+1.5
4,081,626	+	nuoL	NIAGMN_20660	0.64	+0.5
4,081,687	+	nuoL	NIAGMN_20660	0.67	-0.1
4,081,939	+	nuoL	NIAGMN_20660	0.81	-0.5
4,081,939	+	nuoL	NIAGMN_20660	0.81	-0.3
4,082,002	+	nuoL	NIAGMN_20660	0.84	-1.3
4,082,003	-	nuoL	NIAGMN_20660	0.84	-1.3
4,082,061	-	nuoL	NIAGMN_20660	0.87	+0.1
4,082,088	-	nuoL	NIAGMN_20660	0.89	+0.5
4,082,195	-				-1.3
4,082,234	+				+0.9
4,082,234	+				-1.3
4,082,235	-				+1.5
4,082,286	+				+0.2
4,082,314	+				+0.5
4,082,315	-				-1.3
4,082,361	+				+0.9
4,082,434	-				-0.4
4,082,437	+				-0.1
4,082,437	+				-0.1
4,082,438	-				+0.5
4,082,441	+				-1.0
4,082,442	-				-0.1
4,082,507	+				+0.5
4,082,507	+				+1.5
4,082,507	+				+2.0
4,082,507	+				+1.7
4,082,508	-				+0.7
4,082,508	-				+0.9
4,082,518	+				-0.1
4,082,518	+				+0.5
4,082,518	+				-1.5
4,082,518	+				-0.1
4,082,518	+				+0.9
4,082,518	+				-0.1
4,082,519	-				-0.1
4,082,522	+				+0.9
4,082,522	+				-0.5
4,082,522	+				+1.5
4,082,522	+				-0.9
4,082,522	+				-0.1
4,082,522	+				-0.5
4,082,522	+				+1.5
4,082,523	-				+1.5
4,082,523	-				+0.1
4,082,523	-				+1.0
4,082,523	-				-1.1
4,082,523	-				+1.5
4,082,523	-				+1.0
4,082,523	-				-1.1
4,082,523	-				-0.1
4,082,526	+				-0.5
4,082,527	-				-0.5
4,082,527	-				+1.5
4,082,527	-				+0.5
4,082,527	-				+0.5
4,082,527	-				+0.9
4,082,527	-				-0.9
4,082,527	-				-0.9
4,082,527	-				+0.5
4,082,527	-				+0.5
4,082,531	+				+2.5
4,082,531	+				+1.5
4,082,543	+				-0.9
4,082,546	+				+1.5
4,082,546	+				+2.5
4,082,549	+				-0.8
4,082,549	+				-1.1
4,082,549	+				+1.5
4,082,754	+	nuoM	NIAGMN_20665	0.15	-1.1
4,082,760	+	nuoM	NIAGMN_20665	0.15	+0.9
4,082,761	-	nuoM	NIAGMN_20665	0.15	-0.5
4,082,860	+	nuoM	NIAGMN_20665	0.22	-0.3
4,082,977	+	nuoM	NIAGMN_20665	0.29	+0.5
4,082,977	+	nuoM	NIAGMN_20665	0.29	-0.1
4,083,003	+	nuoM	NIAGMN_20665	0.31	+0.5
4,083,004	-	nuoM	NIAGMN_20665	0.31	+0.5
4,083,019	-	nuoM	NIAGMN_20665	0.32	-0.5
4,083,027	+	nuoM	NIAGMN_20665	0.33	-0.9
4,083,055	+	nuoM	NIAGMN_20665	0.35	+1.5
4,083,116	-	nuoM	NIAGMN_20665	0.38	-0.9
4,083,162	+	nuoM	NIAGMN_20665	0.42	+0.3
4,083,188	-	nuoM	NIAGMN_20665	0.43	+0.5
4,083,188	-	nuoM	NIAGMN_20665	0.43	+1.5