Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_06324

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
87,222	+		MPMX19_06323	0.75	-0.1
87,222	+		MPMX19_06323	0.75	-1.3
87,222	+		MPMX19_06323	0.75	+0.1
87,222	+		MPMX19_06323	0.75	-0.1
87,222	+		MPMX19_06323	0.75	-0.7
87,222	+		MPMX19_06323	0.75	+0.2
87,222	+		MPMX19_06323	0.75	-0.2
87,222	+		MPMX19_06323	0.75	-0.1
87,223	-		MPMX19_06323	0.75	-1.3
87,223	-		MPMX19_06323	0.75	-0.2
87,223	-		MPMX19_06323	0.75	+0.6
87,223	-		MPMX19_06323	0.75	-1.2
87,223	-		MPMX19_06323	0.75	-0.6
87,223	-		MPMX19_06323	0.75	+0.3
87,223	-		MPMX19_06323	0.75	-1.3
87,289	+		MPMX19_06323	0.77	-0.7
87,289	+		MPMX19_06323	0.77	-0.6
87,289	+		MPMX19_06323	0.77	+1.3
87,289	+		MPMX19_06323	0.77	+0.8
87,289	+		MPMX19_06323	0.77	-0.6
87,289	+		MPMX19_06323	0.77	-1.8
87,290	-		MPMX19_06323	0.77	-0.6
87,290	-		MPMX19_06323	0.77	-0.1
87,290	-		MPMX19_06323	0.77	-1.7
87,290	-		MPMX19_06323	0.77	+1.3
87,290	-		MPMX19_06323	0.77	-0.3
87,475	+		MPMX19_06323	0.82	-0.6
87,476	-		MPMX19_06323	0.82	-1.1
87,478	+		MPMX19_06323	0.82	+1.4
87,478	+		MPMX19_06323	0.82	-0.1
87,478	+		MPMX19_06323	0.82	-0.1
87,478	+		MPMX19_06323	0.82	+0.7
87,478	+		MPMX19_06323	0.82	+0.3
87,478	+		MPMX19_06323	0.82	-0.6
87,479	-		MPMX19_06323	0.82	-0.7
87,479	-		MPMX19_06323	0.82	-1.7
87,479	-		MPMX19_06323	0.82	-1.9
87,479	-		MPMX19_06323	0.82	-3.0
87,567	+		MPMX19_06323	0.84	+0.3
87,568	-		MPMX19_06323	0.84	-0.4
87,568	-		MPMX19_06323	0.84	-0.8
87,745	-		MPMX19_06323	0.88	+0.0
87,745	-		MPMX19_06323	0.88	-0.7
87,745	-		MPMX19_06323	0.88	-0.1
87,757	+		MPMX19_06323	0.89	-2.0
87,757	+		MPMX19_06323	0.89	-1.4
87,772	+		MPMX19_06323	0.89	-0.6
87,772	+		MPMX19_06323	0.89	+0.3
87,772	+		MPMX19_06323	0.89	-2.4
87,773	-		MPMX19_06323	0.89	-0.7
87,773	-		MPMX19_06323	0.89	-0.6
87,773	-		MPMX19_06323	0.89	+0.1
87,773	-		MPMX19_06323	0.89	-1.7
87,782	+		MPMX19_06323	0.89	-1.8
87,783	-		MPMX19_06323	0.89	-1.2
87,793	+		MPMX19_06323	0.90	+0.7
87,794	-		MPMX19_06323	0.90	-1.8
87,794	-		MPMX19_06323	0.90	-2.6
87,794	-		MPMX19_06323	0.90	-0.4
87,794	-		MPMX19_06323	0.90	-1.2
87,810	+				-0.9
87,810	+				+0.7
87,811	-				-0.3
87,811	-				-0.9
87,820	+				+1.2
87,820	+				+0.4
87,820	+				-0.6
87,820	+				-0.3
87,821	-				-1.1
87,821	-				-2.1
87,821	-				+0.8
87,821	-				-0.6
87,821	-				+1.3
87,821	-				-1.9
87,821	-				-0.3
87,821	-				+0.0
87,821	-				-1.2
87,888	+				-1.2
87,888	+				+0.6
87,888	+				-1.5
87,888	+				-1.9
87,889	-				-1.8
87,889	-				-0.9
88,025	+				+0.1
88,025	+				-0.3
88,026	-				-0.7
88,026	-				+1.5
88,029	-				-0.6
88,054	+				-0.8
88,054	+				-1.1
88,054	+				-2.1
88,054	+				-1.2
88,055	-				-0.1
88,055	-				-0.1
88,055	-				-0.4
88,055	-				+0.0
88,055	-				+0.4
88,132	+				-0.6
88,132	+				-0.2
88,133	-				+2.7
88,133	-				+0.4
88,133	-				+0.3
88,133	-				-0.6
88,133	-				+0.3
88,133	-				-0.1
88,133	-				+0.8
88,159	+				+0.3
88,160	-				-1.0
88,179	+				-0.1
88,179	+				+0.4
88,179	+				-1.8
88,179	+				+0.9
88,179	+				-0.3
88,179	+				-1.1
88,179	+				-0.9
88,179	+				-0.6
88,179	+				+0.7
88,179	+				-0.1
88,179	+				+0.7
88,179	+				+0.9
88,179	+				-0.4
88,179	+				+0.4
88,179	+				-0.9
88,179	+				-0.9
88,179	+				-1.3
88,179	+				-0.1
88,179	+				-1.8
88,179	+				-0.9
88,179	+				-0.9
88,179	+				+0.0
88,179	+				+0.4
88,179	+				-0.7
88,179	+				-0.5
88,179	+				-0.2
88,179	+				-1.8
88,179	+				+0.4
88,179	+				-1.6
88,179	+				-0.4
88,180	-				-1.1
88,180	-				-0.9
88,180	-				-0.7
88,180	-				+0.1
88,180	-				-1.3
88,180	-				-0.5
88,180	-				-0.6
88,180	-				+0.3
88,180	-				-0.2
88,180	-				-0.1
88,180	-				-0.6
88,180	-				+0.7
88,180	-				-1.7
88,180	-				+0.3
88,180	-				-0.2
88,180	-				-1.2
88,180	-				-1.1
88,180	-				-0.1
88,180	-				-0.7
88,180	-				+0.5
88,180	-				-0.7
88,180	-				+0.5
88,180	-				-0.9
88,180	-				+0.4
88,180	-				-1.2
88,180	-				-0.6
88,180	-				+0.3
88,180	-				+0.8
88,180	-				+0.0
88,180	-				+0.6
88,180	-				+0.4
88,180	-				-0.6
88,180	-				-1.4
88,180	-				-0.4
88,180	-				+0.8
88,180	-				+1.5
88,180	-				-0.3
88,180	-				-2.1
88,180	-				-0.7
88,180	-				-1.3
88,200	+				-1.0
88,201	-				+0.6
88,201	-				-0.7
88,250	+				-0.1
88,250	+				+0.4
88,251	-				-0.7
88,331	+		MPMX19_06324	0.17	-2.0
88,331	+		MPMX19_06324	0.17	-1.1
88,331	+		MPMX19_06324	0.17	-0.7
88,332	-		MPMX19_06324	0.17	-1.3
88,332	-		MPMX19_06324	0.17	+2.3
88,452	+		MPMX19_06324	0.32	-0.7
88,485	+		MPMX19_06324	0.36	-0.3
88,485	+		MPMX19_06324	0.36	-0.6
88,485	+		MPMX19_06324	0.36	-0.6
88,485	+		MPMX19_06324	0.36	+0.4
88,485	+		MPMX19_06324	0.36	-0.1
88,485	+		MPMX19_06324	0.36	+0.9
88,486	-		MPMX19_06324	0.36	-0.5
88,508	+		MPMX19_06324	0.39	-2.1
88,508	+		MPMX19_06324	0.39	-0.4
88,508	+		MPMX19_06324	0.39	-0.7
88,508	+		MPMX19_06324	0.39	+1.3
88,508	+		MPMX19_06324	0.39	-0.1
88,509	-		MPMX19_06324	0.39	-2.5
88,509	-		MPMX19_06324	0.39	-0.5
88,509	-		MPMX19_06324	0.39	-0.9
88,530	+		MPMX19_06324	0.42	-1.0
88,530	+		MPMX19_06324	0.42	-1.2
88,531	-		MPMX19_06324	0.42	+0.1
88,626	+		MPMX19_06324	0.54	-0.9
88,626	+		MPMX19_06324	0.54	-1.1
88,626	+		MPMX19_06324	0.54	-0.3
88,626	+		MPMX19_06324	0.54	-1.3
88,627	-		MPMX19_06324	0.54	+0.3
88,627	-		MPMX19_06324	0.54	+1.3
88,627	-		MPMX19_06324	0.54	-0.7
88,627	-		MPMX19_06324	0.54	+1.5
88,627	-		MPMX19_06324	0.54	-0.3
88,627	-		MPMX19_06324	0.54	+0.0
88,627	-		MPMX19_06324	0.54	-1.6
88,627	-		MPMX19_06324	0.54	-0.0
88,627	-		MPMX19_06324	0.54	-1.5
88,627	-		MPMX19_06324	0.54	-2.4
88,727	+		MPMX19_06324	0.67	+0.1
88,728	-		MPMX19_06324	0.67	-0.3
88,728	-		MPMX19_06324	0.67	-1.0
88,759	+		MPMX19_06324	0.71	-1.7
88,759	+		MPMX19_06324	0.71	+0.7
88,759	+		MPMX19_06324	0.71	-0.7
88,760	-		MPMX19_06324	0.71	+0.8
88,797	+		MPMX19_06324	0.76	-1.4
88,797	+		MPMX19_06324	0.76	+0.4
88,797	+		MPMX19_06324	0.76	-0.6
88,797	+		MPMX19_06324	0.76	+1.3
88,797	+		MPMX19_06324	0.76	-0.1
88,797	+		MPMX19_06324	0.76	-0.2
88,797	+		MPMX19_06324	0.76	-0.6
88,797	+		MPMX19_06324	0.76	-1.0
88,797	+		MPMX19_06324	0.76	-1.8
88,797	+		MPMX19_06324	0.76	-0.4
88,797	+		MPMX19_06324	0.76	+1.3
88,797	+		MPMX19_06324	0.76	-0.1
88,798	-		MPMX19_06324	0.76	-1.6
88,798	-		MPMX19_06324	0.76	+2.3
88,798	-		MPMX19_06324	0.76	+0.1
88,798	-		MPMX19_06324	0.76	-1.7
88,798	-		MPMX19_06324	0.76	-2.4
88,798	-		MPMX19_06324	0.76	-0.3
88,798	-		MPMX19_06324	0.76	-1.4
88,798	-		MPMX19_06324	0.76	-0.8
88,798	-		MPMX19_06324	0.76	-0.6
88,799	+		MPMX19_06324	0.76	-0.7
88,799	+		MPMX19_06324	0.76	+0.7
88,799	+		MPMX19_06324	0.76	-0.7
88,799	+		MPMX19_06324	0.76	-1.4
88,799	+		MPMX19_06324	0.76	+0.3
88,799	+		MPMX19_06324	0.76	+0.2
88,800	-		MPMX19_06324	0.76	-0.2
88,800	-		MPMX19_06324	0.76	+1.3
88,800	-		MPMX19_06324	0.76	+0.9
88,824	+		MPMX19_06324	0.79	+0.7
88,825	-		MPMX19_06324	0.79	-0.3
88,840	+		MPMX19_06324	0.81	-0.2
88,840	+		MPMX19_06324	0.81	+0.8
88,840	+		MPMX19_06324	0.81	-0.3
88,840	+		MPMX19_06324	0.81	-1.2
88,841	-		MPMX19_06324	0.81	+1.4
88,841	-		MPMX19_06324	0.81	+1.8
88,841	-		MPMX19_06324	0.81	-0.6
89,027	+				-0.9
89,027	+				+0.7
89,027	+				-1.1
89,163	+				+2.3
89,163	+				-0.7
89,163	+				-0.8
89,163	+				-1.1
89,164	-				+0.9
89,164	-				+0.8
89,164	-				-0.9
89,164	-				-1.1
89,164	-				-0.9
89,283	-		MPMX19_06325	0.10	-0.7
89,283	-		MPMX19_06325	0.10	-2.0
89,427	+		MPMX19_06325	0.15	+1.7
89,602	+		MPMX19_06325	0.21	+1.3
89,602	+		MPMX19_06325	0.21	-0.6
89,602	+		MPMX19_06325	0.21	+1.7
89,602	+		MPMX19_06325	0.21	-1.7
89,602	+		MPMX19_06325	0.21	+3.8
89,602	+		MPMX19_06325	0.21	-1.0
89,603	-		MPMX19_06325	0.21	+0.1
89,603	-		MPMX19_06325	0.21	+0.1
89,603	-		MPMX19_06325	0.21	+0.7
89,603	-		MPMX19_06325	0.21	-0.7
89,603	-		MPMX19_06325	0.21	-0.2
89,603	-		MPMX19_06325	0.21	-1.3
89,620	+		MPMX19_06325	0.22	-0.1
89,621	-		MPMX19_06325	0.22	+0.4
89,682	-		MPMX19_06325	0.24	-1.0
89,734	+		MPMX19_06325	0.25	-0.9
89,734	+		MPMX19_06325	0.25	-0.6
89,735	-		MPMX19_06325	0.25	-1.3