Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02014

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,100,918	+				-0.4
2,100,918	+				-0.9
2,100,919	-				-0.5
2,100,919	-				-0.2
2,100,919	-				-0.7
2,100,919	-				-0.2
2,100,933	+				-0.1
2,100,933	+				-0.9
2,100,934	-				-0.7
2,100,934	-				+1.5
2,100,934	-				-0.7
2,101,041	+		MPMX19_02013	0.12	-0.3
2,101,041	+		MPMX19_02013	0.12	+0.2
2,101,041	+		MPMX19_02013	0.12	-1.9
2,101,041	+		MPMX19_02013	0.12	-0.5
2,101,041	+		MPMX19_02013	0.12	-0.4
2,101,041	+		MPMX19_02013	0.12	-1.2
2,101,041	+		MPMX19_02013	0.12	-0.4
2,101,041	+		MPMX19_02013	0.12	-0.2
2,101,041	-		MPMX19_02013	0.12	-0.8
2,101,042	-		MPMX19_02013	0.12	+0.5
2,101,042	-		MPMX19_02013	0.12	+0.1
2,101,042	-		MPMX19_02013	0.12	-0.8
2,101,042	-		MPMX19_02013	0.12	-0.9
2,101,042	-		MPMX19_02013	0.12	-0.7
2,101,042	-		MPMX19_02013	0.12	+1.3
2,101,042	-		MPMX19_02013	0.12	+0.5
2,101,042	-		MPMX19_02013	0.12	-1.8
2,101,042	-		MPMX19_02013	0.12	-1.7
2,101,042	-		MPMX19_02013	0.12	-1.2
2,101,042	-		MPMX19_02013	0.12	-0.7
2,101,170	+		MPMX19_02013	0.31	-0.9
2,101,170	+		MPMX19_02013	0.31	-1.5
2,101,170	+		MPMX19_02013	0.31	+0.9
2,101,171	-		MPMX19_02013	0.31	-0.2
2,101,171	-		MPMX19_02013	0.31	-0.4
2,101,171	-		MPMX19_02013	0.31	-0.6
2,101,171	-		MPMX19_02013	0.31	-1.1
2,101,171	-		MPMX19_02013	0.31	-0.8
2,101,171	-		MPMX19_02013	0.31	-1.1
2,101,203	+		MPMX19_02013	0.36	-0.9
2,101,203	+		MPMX19_02013	0.36	-0.6
2,101,203	+		MPMX19_02013	0.36	+0.3
2,101,203	+		MPMX19_02013	0.36	-0.4
2,101,203	+		MPMX19_02013	0.36	-0.2
2,101,203	+		MPMX19_02013	0.36	-1.5
2,101,203	+		MPMX19_02013	0.36	+0.1
2,101,203	+		MPMX19_02013	0.36	-1.1
2,101,203	+		MPMX19_02013	0.36	-0.2
2,101,203	+		MPMX19_02013	0.36	-1.6
2,101,204	-		MPMX19_02013	0.36	+0.2
2,101,204	-		MPMX19_02013	0.36	-0.9
2,101,204	-		MPMX19_02013	0.36	-1.3
2,101,204	-		MPMX19_02013	0.36	-0.2
2,101,204	-		MPMX19_02013	0.36	+1.1
2,101,204	-		MPMX19_02013	0.36	+0.7
2,101,204	-		MPMX19_02013	0.36	-1.1
2,101,204	-		MPMX19_02013	0.36	-0.4
2,101,244	-		MPMX19_02013	0.42	+0.1
2,101,636	+				-0.7
2,101,636	+				+1.4
2,101,636	+				-0.2
2,101,637	-				-1.4
2,101,637	-				-1.4
2,101,637	-				-0.7
2,101,637	-				-0.2
2,101,637	-				+0.1
2,101,637	-				-0.3
2,101,736	+				-0.7
2,101,736	+				-1.9
2,101,736	+				+0.5
2,101,736	+				+0.7
2,101,736	+				-0.4
2,101,736	+				-0.4
2,101,736	+				-1.0
2,101,736	+				-0.0
2,101,736	+				-1.1
2,101,737	-				-0.4
2,101,737	-				-1.2
2,101,737	-				-0.0
2,101,737	-				+0.2
2,101,737	-				-1.2
2,101,737	-				+0.2
2,101,737	-				-1.6
2,101,737	-				+0.1
2,101,737	-				+0.6
2,101,737	-				-0.7
2,101,737	-				-0.3
2,101,737	-				+0.3
2,101,737	-				-0.9
2,101,737	-				-0.7
2,101,737	-				-0.5
2,101,738	+				-0.2
2,101,738	+				-0.5
2,101,738	+				-1.1
2,101,738	+				+1.1
2,101,738	+				-1.2
2,101,738	+				-1.6
2,101,738	+				-1.5
2,101,738	+				-1.2
2,101,738	+				-1.5
2,101,738	+				+0.2
2,101,738	+				+0.2
2,101,738	+				+0.1
2,101,738	+				-1.6
2,101,738	+				-0.2
2,101,738	+				-1.2
2,101,738	+				+0.2
2,101,738	+				-0.9
2,101,738	+				-1.1
2,101,738	+				-0.6
2,101,738	+				-0.9
2,101,738	+				+0.6
2,101,738	+				-0.5
2,101,738	+				-0.9
2,101,738	+				-0.5
2,101,738	+				-0.9
2,101,738	+				-1.0
2,101,738	+				-0.4
2,101,738	+				+0.2
2,101,738	+				-2.9
2,101,738	+				+0.4
2,101,738	+				-0.7
2,101,738	+				-1.9
2,101,739	-				-0.7
2,101,739	-				+0.3
2,101,739	-				-0.5
2,101,739	-				-0.9
2,101,739	-				-1.0
2,101,739	-				-0.1
2,101,739	-				-1.2
2,101,739	-				+0.9
2,101,739	-				-0.6
2,101,739	-				-2.0
2,101,739	-				-1.9
2,101,739	-				-1.2
2,101,739	-				+0.7
2,101,739	-				-1.3
2,101,739	-				-0.6
2,101,739	-				+0.1
2,101,739	-				+0.3
2,101,739	-				-1.8
2,101,739	-				-1.1
2,101,739	-				-0.2
2,101,739	-				-1.1
2,101,739	-				-1.1
2,101,739	-				-0.7
2,101,739	-				-0.1
2,101,739	-				-0.6
2,101,739	-				-0.9
2,101,739	-				-0.8
2,101,739	-				-2.2
2,101,739	-				+0.8
2,101,739	-				+0.6
2,101,739	-				-0.2
2,102,424	+		MPMX19_02014	0.24	-0.4
2,102,424	+		MPMX19_02014	0.24	+0.2
2,102,424	+		MPMX19_02014	0.24	-1.4
2,102,424	+		MPMX19_02014	0.24	+2.1
2,102,425	-		MPMX19_02014	0.24	-0.8
2,102,425	-		MPMX19_02014	0.24	-2.9
2,102,425	-		MPMX19_02014	0.24	-0.7
2,102,425	-		MPMX19_02014	0.24	+0.0
2,102,526	+		MPMX19_02014	0.28	+0.3
2,102,527	-		MPMX19_02014	0.28	+0.5
2,102,527	-		MPMX19_02014	0.28	-0.6
2,102,527	-		MPMX19_02014	0.28	+0.5
2,102,527	-		MPMX19_02014	0.28	+1.1
2,102,527	-		MPMX19_02014	0.28	-1.6
2,102,527	-		MPMX19_02014	0.28	+0.4
2,102,586	+		MPMX19_02014	0.30	-1.9
2,102,586	+		MPMX19_02014	0.30	-2.1
2,102,586	+		MPMX19_02014	0.30	-1.1
2,102,586	+		MPMX19_02014	0.30	-0.4
2,102,586	+		MPMX19_02014	0.30	-0.4
2,102,586	+		MPMX19_02014	0.30	+0.5
2,102,586	+		MPMX19_02014	0.30	-0.7
2,102,586	+		MPMX19_02014	0.30	-0.8
2,102,586	+		MPMX19_02014	0.30	-0.7
2,102,586	+		MPMX19_02014	0.30	-1.4
2,102,586	+		MPMX19_02014	0.30	-1.5
2,102,586	+		MPMX19_02014	0.30	-0.9
2,102,586	+		MPMX19_02014	0.30	-0.2
2,102,586	+		MPMX19_02014	0.30	-0.2
2,102,586	+		MPMX19_02014	0.30	-0.4
2,102,587	-		MPMX19_02014	0.30	-0.5
2,102,587	-		MPMX19_02014	0.30	-1.5
2,102,587	-		MPMX19_02014	0.30	-0.5
2,102,587	-		MPMX19_02014	0.30	-0.5
2,102,587	-		MPMX19_02014	0.30	-1.7
2,102,587	-		MPMX19_02014	0.30	-0.9
2,102,587	-		MPMX19_02014	0.30	+0.4
2,102,587	-		MPMX19_02014	0.30	+0.2
2,102,587	-		MPMX19_02014	0.30	-1.1
2,102,587	-		MPMX19_02014	0.30	-0.1
2,102,587	-		MPMX19_02014	0.30	-1.6
2,102,587	-		MPMX19_02014	0.30	-1.6
2,102,587	-		MPMX19_02014	0.30	-0.0
2,102,587	-		MPMX19_02014	0.30	-1.0
2,102,587	-		MPMX19_02014	0.30	+0.8
2,102,587	-		MPMX19_02014	0.30	-0.9
2,102,587	-		MPMX19_02014	0.30	-2.0
2,102,587	-		MPMX19_02014	0.30	+0.5
2,102,588	+		MPMX19_02014	0.30	+0.4
2,102,589	-		MPMX19_02014	0.30	+0.5
2,102,634	+		MPMX19_02014	0.32	-1.2
2,102,634	+		MPMX19_02014	0.32	-1.1
2,102,635	-		MPMX19_02014	0.32	+0.5
2,102,635	-		MPMX19_02014	0.32	-1.5
2,102,635	-		MPMX19_02014	0.32	-0.8
2,102,635	-		MPMX19_02014	0.32	-1.1
2,102,635	-		MPMX19_02014	0.32	-0.9
2,102,691	+		MPMX19_02014	0.34	-1.8
2,102,691	+		MPMX19_02014	0.34	-2.2
2,102,691	+		MPMX19_02014	0.34	+1.8
2,102,691	+		MPMX19_02014	0.34	-1.5
2,102,691	+		MPMX19_02014	0.34	+1.1
2,102,691	+		MPMX19_02014	0.34	-0.6
2,102,691	+		MPMX19_02014	0.34	-0.1
2,102,691	+		MPMX19_02014	0.34	-0.9
2,102,691	+		MPMX19_02014	0.34	-1.5
2,102,691	+		MPMX19_02014	0.34	-0.0
2,102,691	+		MPMX19_02014	0.34	-1.4
2,102,691	+		MPMX19_02014	0.34	-0.9
2,102,691	+		MPMX19_02014	0.34	-0.6
2,102,691	+		MPMX19_02014	0.34	-0.0
2,102,691	+		MPMX19_02014	0.34	-1.0
2,102,691	+		MPMX19_02014	0.34	+0.8
2,102,691	+		MPMX19_02014	0.34	-1.4
2,102,691	+		MPMX19_02014	0.34	-0.4
2,102,692	-		MPMX19_02014	0.34	+0.5
2,102,692	-		MPMX19_02014	0.34	+1.1
2,102,692	-		MPMX19_02014	0.34	-2.8
2,102,692	-		MPMX19_02014	0.34	-2.3
2,102,692	-		MPMX19_02014	0.34	-1.4
2,102,692	-		MPMX19_02014	0.34	-2.0
2,102,692	-		MPMX19_02014	0.34	-1.8
2,102,692	-		MPMX19_02014	0.34	-0.6
2,102,692	-		MPMX19_02014	0.34	-0.7
2,102,692	-		MPMX19_02014	0.34	-1.0
2,102,692	-		MPMX19_02014	0.34	+0.2
2,102,692	-		MPMX19_02014	0.34	-2.2
2,102,692	-		MPMX19_02014	0.34	+0.5
2,102,692	-		MPMX19_02014	0.34	-0.6
2,102,692	-		MPMX19_02014	0.34	-1.5
2,102,692	-		MPMX19_02014	0.34	+0.8
2,102,692	-		MPMX19_02014	0.34	-1.1
2,102,692	-		MPMX19_02014	0.34	-0.4
2,102,895	+		MPMX19_02014	0.41	+1.0
2,102,895	+		MPMX19_02014	0.41	+0.6
2,102,895	+		MPMX19_02014	0.41	-1.1
2,102,895	+		MPMX19_02014	0.41	-0.5
2,102,895	+		MPMX19_02014	0.41	-1.9
2,102,895	+		MPMX19_02014	0.41	+0.1
2,102,895	+		MPMX19_02014	0.41	-0.1
2,102,895	+		MPMX19_02014	0.41	+0.9
2,102,896	-		MPMX19_02014	0.41	-2.4
2,102,896	-		MPMX19_02014	0.41	-1.1
2,102,896	-		MPMX19_02014	0.41	-1.0
2,102,896	-		MPMX19_02014	0.41	+0.4
2,102,896	-		MPMX19_02014	0.41	-0.6
2,102,896	-		MPMX19_02014	0.41	-0.5
2,102,896	-		MPMX19_02014	0.41	-1.2
2,102,896	-		MPMX19_02014	0.41	-0.7
2,102,896	-		MPMX19_02014	0.41	-1.4
2,102,896	-		MPMX19_02014	0.41	-0.5
2,102,913	+		MPMX19_02014	0.42	-1.1
2,102,913	+		MPMX19_02014	0.42	+0.2
2,102,913	+		MPMX19_02014	0.42	-0.7
2,102,913	+		MPMX19_02014	0.42	-1.1
2,102,914	-		MPMX19_02014	0.42	+0.8
2,102,914	-		MPMX19_02014	0.42	+0.2
2,102,914	-		MPMX19_02014	0.42	-0.1
2,102,914	-		MPMX19_02014	0.42	-1.1
2,102,914	-		MPMX19_02014	0.42	+0.9
2,102,914	-		MPMX19_02014	0.42	-0.2
2,102,914	-		MPMX19_02014	0.42	-0.7
2,102,914	-		MPMX19_02014	0.42	+0.2
2,102,914	-		MPMX19_02014	0.42	+0.3
2,102,914	-		MPMX19_02014	0.42	-1.1
2,102,914	-		MPMX19_02014	0.42	-2.0
2,102,914	-		MPMX19_02014	0.42	-1.5
2,102,925	+		MPMX19_02014	0.43	-0.4
2,102,925	+		MPMX19_02014	0.43	+0.6
2,102,925	+		MPMX19_02014	0.43	-0.5
2,102,925	+		MPMX19_02014	0.43	+0.3
2,102,926	-		MPMX19_02014	0.43	-1.3
2,102,926	-		MPMX19_02014	0.43	+0.6
2,102,926	-		MPMX19_02014	0.43	-2.2
2,103,042	+		MPMX19_02014	0.47	+0.1
2,103,042	+		MPMX19_02014	0.47	-0.1
2,103,042	+		MPMX19_02014	0.47	-2.4
2,103,042	+		MPMX19_02014	0.47	-0.1
2,103,043	-		MPMX19_02014	0.47	-0.1
2,103,043	-		MPMX19_02014	0.47	+0.5
2,103,043	-		MPMX19_02014	0.47	-1.0
2,103,043	-		MPMX19_02014	0.47	-0.6
2,103,043	-		MPMX19_02014	0.47	+0.1
2,103,043	-		MPMX19_02014	0.47	-1.4
2,103,043	-		MPMX19_02014	0.47	+0.9
2,103,043	-		MPMX19_02014	0.47	-1.6
2,103,354	+		MPMX19_02014	0.58	-0.7
2,103,354	+		MPMX19_02014	0.58	-1.6
2,103,354	+		MPMX19_02014	0.58	-0.7
2,103,354	+		MPMX19_02014	0.58	+1.0
2,103,354	+		MPMX19_02014	0.58	+0.1
2,103,354	+		MPMX19_02014	0.58	-1.5
2,103,354	+		MPMX19_02014	0.58	+0.2
2,103,354	+		MPMX19_02014	0.58	+0.4
2,103,355	-		MPMX19_02014	0.58	+0.5
2,103,355	-		MPMX19_02014	0.58	-1.4
2,103,355	-		MPMX19_02014	0.58	+0.5
2,103,355	-		MPMX19_02014	0.58	+1.4
2,103,355	-		MPMX19_02014	0.58	-0.8
2,103,355	-		MPMX19_02014	0.58	-1.2
2,103,355	-		MPMX19_02014	0.58	+1.1
2,103,355	-		MPMX19_02014	0.58	+1.4
2,103,384	+		MPMX19_02014	0.59	-1.1
2,103,384	+		MPMX19_02014	0.59	-0.6
2,103,384	+		MPMX19_02014	0.59	-0.9
2,103,385	-		MPMX19_02014	0.59	-1.8
2,103,409	-		MPMX19_02014	0.60	+0.4
2,103,711	+		MPMX19_02014	0.71	+0.5
2,103,711	+		MPMX19_02014	0.71	-1.6
2,103,711	+		MPMX19_02014	0.71	+0.3
2,103,712	-		MPMX19_02014	0.71	-0.7
2,103,712	-		MPMX19_02014	0.71	-0.5
2,103,712	-		MPMX19_02014	0.71	+0.3
2,103,909	+		MPMX19_02014	0.78	+1.1
2,103,910	-		MPMX19_02014	0.78	-1.3
2,103,981	+		MPMX19_02014	0.81	-0.6
2,103,982	-		MPMX19_02014	0.81	-1.2
2,103,982	-		MPMX19_02014	0.81	-1.3
2,103,982	-		MPMX19_02014	0.81	-2.1
2,103,982	-		MPMX19_02014	0.81	-0.5
2,103,982	-		MPMX19_02014	0.81	-0.7
2,103,982	-		MPMX19_02014	0.81	-1.4
2,104,101	+		MPMX19_02014	0.85	-1.6
2,104,101	+		MPMX19_02014	0.85	+1.1
2,104,101	+		MPMX19_02014	0.85	-0.5
2,104,101	+		MPMX19_02014	0.85	+0.5
2,104,101	+		MPMX19_02014	0.85	-1.5
2,104,101	+		MPMX19_02014	0.85	-0.5
2,104,101	+		MPMX19_02014	0.85	-1.9
2,104,102	-		MPMX19_02014	0.85	-0.9
2,104,102	-		MPMX19_02014	0.85	-0.3
2,104,102	-		MPMX19_02014	0.85	-1.0
2,104,102	-		MPMX19_02014	0.85	-1.3
2,104,102	-		MPMX19_02014	0.85	+0.1
2,104,102	-		MPMX19_02014	0.85	-0.1
2,104,102	-		MPMX19_02014	0.85	-0.7
2,104,102	-		MPMX19_02014	0.85	+0.2
2,104,102	-		MPMX19_02014	0.85	-0.5
2,104,102	-		MPMX19_02014	0.85	+1.5
2,104,311	+				-1.6
2,104,311	+				-1.1
2,104,311	+				-1.1
2,104,312	-				-1.5
2,104,312	-				-0.1
2,104,524	+				-0.1
2,104,524	+				-2.0
2,104,524	+				-0.7
2,104,525	-				-0.6
2,104,525	-				-0.2
2,104,525	-				+0.8
2,104,525	-				+0.1
2,104,525	-				+0.8
2,104,525	-				+0.1
2,104,525	-				+0.7