Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01926

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,009,323	+				-1.6
2,009,324	-				+0.4
2,009,324	-				-2.3
2,009,324	-				+0.5
2,009,435	+		MPMX19_01925	0.18	+0.5
2,009,435	+		MPMX19_01925	0.18	+0.5
2,009,435	+		MPMX19_01925	0.18	-0.0
2,009,435	+		MPMX19_01925	0.18	-1.1
2,009,435	+		MPMX19_01925	0.18	+0.6
2,009,435	+		MPMX19_01925	0.18	-1.4
2,009,435	+		MPMX19_01925	0.18	-1.2
2,009,435	+		MPMX19_01925	0.18	+0.6
2,009,435	+		MPMX19_01925	0.18	-0.4
2,009,435	+		MPMX19_01925	0.18	+1.4
2,009,435	+		MPMX19_01925	0.18	+1.3
2,009,435	+		MPMX19_01925	0.18	-0.1
2,009,435	+		MPMX19_01925	0.18	-0.4
2,009,435	+		MPMX19_01925	0.18	+0.7
2,009,435	+		MPMX19_01925	0.18	-0.6
2,009,435	+		MPMX19_01925	0.18	+0.5
2,009,435	+		MPMX19_01925	0.18	+1.3
2,009,435	+		MPMX19_01925	0.18	-1.2
2,009,435	+		MPMX19_01925	0.18	-1.2
2,009,435	+		MPMX19_01925	0.18	-0.5
2,009,436	-		MPMX19_01925	0.18	+0.8
2,009,436	-		MPMX19_01925	0.18	+0.0
2,009,436	-		MPMX19_01925	0.18	-1.3
2,009,436	-		MPMX19_01925	0.18	+0.1
2,009,436	-		MPMX19_01925	0.18	-0.0
2,009,436	-		MPMX19_01925	0.18	+0.8
2,009,436	-		MPMX19_01925	0.18	-0.2
2,009,436	-		MPMX19_01925	0.18	+0.3
2,009,436	-		MPMX19_01925	0.18	+0.9
2,009,436	-		MPMX19_01925	0.18	-1.8
2,009,436	-		MPMX19_01925	0.18	-1.7
2,009,436	-		MPMX19_01925	0.18	-0.9
2,009,436	-		MPMX19_01925	0.18	-1.7
2,009,436	-		MPMX19_01925	0.18	+0.3
2,009,436	-		MPMX19_01925	0.18	+1.1
2,009,436	-		MPMX19_01925	0.18	-0.4
2,009,436	-		MPMX19_01925	0.18	-2.0
2,009,436	-		MPMX19_01925	0.18	-1.7
2,009,436	-		MPMX19_01925	0.18	+0.5
2,009,436	-		MPMX19_01925	0.18	+0.2
2,009,436	-		MPMX19_01925	0.18	-2.3
2,009,436	-		MPMX19_01925	0.18	-1.9
2,009,517	+		MPMX19_01925	0.37	-0.7
2,009,517	+		MPMX19_01925	0.37	+0.5
2,009,517	+		MPMX19_01925	0.37	+0.1
2,009,517	+		MPMX19_01925	0.37	+1.5
2,009,517	+		MPMX19_01925	0.37	-0.5
2,009,518	-		MPMX19_01925	0.37	+0.1
2,009,518	-		MPMX19_01925	0.37	-0.2
2,009,648	+		MPMX19_01925	0.67	-1.1
2,009,648	+		MPMX19_01925	0.67	+0.1
2,009,648	+		MPMX19_01925	0.67	-0.8
2,009,648	+		MPMX19_01925	0.67	+0.3
2,009,648	+		MPMX19_01925	0.67	-1.1
2,009,648	+		MPMX19_01925	0.67	-0.9
2,009,648	+		MPMX19_01925	0.67	-0.6
2,009,648	+		MPMX19_01925	0.67	+1.1
2,009,648	+		MPMX19_01925	0.67	+0.2
2,009,649	-		MPMX19_01925	0.68	+2.1
2,009,649	-		MPMX19_01925	0.68	+0.8
2,009,705	+		MPMX19_01925	0.81	-0.6
2,009,705	+		MPMX19_01925	0.81	+0.6
2,009,705	+		MPMX19_01925	0.81	+0.2
2,009,706	-		MPMX19_01925	0.81	-0.1
2,009,706	-		MPMX19_01925	0.81	+1.8
2,009,706	-		MPMX19_01925	0.81	-0.9
2,009,714	+		MPMX19_01925	0.83	+1.3
2,009,714	+		MPMX19_01925	0.83	-0.9
2,009,714	+		MPMX19_01925	0.83	+0.3
2,009,714	+		MPMX19_01925	0.83	-1.4
2,009,714	+		MPMX19_01925	0.83	+0.3
2,009,714	+		MPMX19_01925	0.83	-0.2
2,009,715	-		MPMX19_01925	0.83	-0.6
2,009,715	-		MPMX19_01925	0.83	-0.3
2,009,715	-		MPMX19_01925	0.83	+0.1
2,009,715	-		MPMX19_01925	0.83	-0.9
2,009,715	-		MPMX19_01925	0.83	-0.9
2,009,753	+				+0.3
2,009,753	+				-1.0
2,009,813	+				-0.1
2,009,813	+				-1.6
2,009,813	+				-0.8
2,009,813	+				-0.7
2,009,813	+				-0.5
2,009,813	+				-1.4
2,009,813	+				-0.5
2,009,813	+				+0.9
2,009,813	+				+0.0
2,009,813	+				-0.5
2,009,814	-				+0.0
2,009,814	-				-1.6
2,009,814	-				-0.6
2,009,814	-				-0.2
2,009,814	-				+0.7
2,009,814	-				+0.3
2,009,814	-				-0.7
2,009,822	-				-1.2
2,009,846	+				-0.2
2,009,847	-				+2.1
2,009,847	-				-0.8
2,009,939	+				-1.1
2,009,939	+				-1.3
2,009,939	+				-0.5
2,009,939	+				+0.3
2,009,939	+				+0.6
2,009,939	+				+1.3
2,009,939	+				-0.4
2,009,939	+				+1.1
2,009,939	+				-0.7
2,009,939	+				-0.5
2,009,940	-				-2.2
2,009,940	-				-0.1
2,009,940	-				-0.6
2,009,940	-				-0.7
2,009,940	-				-1.4
2,009,940	-				-1.1
2,010,028	+				-0.5
2,010,029	-				-1.7
2,010,029	-				-0.1
2,010,046	+				-0.1
2,010,046	+				+0.6
2,010,046	+				+0.2
2,010,046	+				+0.7
2,010,046	+				-0.3
2,010,046	+				-1.5
2,010,046	+				-0.8
2,010,046	+				+1.8
2,010,046	+				+1.1
2,010,046	+				+0.5
2,010,047	-				-0.7
2,010,047	-				-1.5
2,010,047	-				-0.6
2,010,047	-				-1.9
2,010,047	-				-0.2
2,010,047	-				-0.9
2,010,047	-				-0.6
2,010,047	-				-0.6
2,010,047	-				-0.8
2,010,047	-				-1.0
2,010,047	-				-0.4
2,010,057	+				-0.1
2,010,057	+				+0.9
2,010,057	+				+0.1
2,010,057	+				+0.2
2,010,057	+				-0.7
2,010,057	+				+1.1
2,010,057	+				+0.4
2,010,057	+				-0.0
2,010,058	-				+0.2
2,010,058	-				-0.2
2,010,058	-				-1.8
2,010,058	-				-1.4
2,010,058	-				-0.1
2,010,058	-				-0.9
2,010,058	-				+0.5
2,010,058	-				+0.6
2,010,058	-				+0.3
2,010,058	-				+0.5
2,010,058	-				-0.4
2,010,058	-				-1.2
2,010,058	-				-0.5
2,010,061	+				+0.7
2,010,061	+				-0.8
2,010,061	+				-0.3
2,010,061	+				-0.7
2,010,061	+				-1.1
2,010,061	+				-1.6
2,010,061	+				+0.1
2,010,061	+				+0.3
2,010,061	+				-0.3
2,010,061	+				-1.0
2,010,061	+				-0.4
2,010,061	+				+0.1
2,010,061	+				+1.1
2,010,061	+				+0.5
2,010,062	-				+0.2
2,010,062	-				-0.3
2,010,062	-				-0.0
2,010,062	-				-0.9
2,010,062	-				-0.6
2,010,062	-				-1.2
2,010,062	-				-1.8
2,010,062	-				-1.2
2,010,062	-				+0.8
2,010,062	-				-0.3
2,010,062	-				-0.7
2,010,062	-				+0.1
2,010,155	-		MPMX19_01926	0.21	-1.1
2,010,155	-		MPMX19_01926	0.21	+1.1
2,010,155	-		MPMX19_01926	0.21	-0.7
2,010,155	-		MPMX19_01926	0.21	-1.2
2,010,155	-		MPMX19_01926	0.21	-0.9
2,010,163	+		MPMX19_01926	0.23	-0.9
2,010,163	+		MPMX19_01926	0.23	+0.2
2,010,163	+		MPMX19_01926	0.23	+0.5
2,010,163	+		MPMX19_01926	0.23	-1.7
2,010,164	-		MPMX19_01926	0.23	-1.6
2,010,164	-		MPMX19_01926	0.23	+0.2
2,010,164	-		MPMX19_01926	0.23	+0.6
2,010,164	-		MPMX19_01926	0.23	-1.8
2,010,164	-		MPMX19_01926	0.23	-0.7
2,010,164	-		MPMX19_01926	0.23	-2.1
2,010,164	-		MPMX19_01926	0.23	+0.2
2,010,276	+		MPMX19_01926	0.46	-1.4
2,010,276	+		MPMX19_01926	0.46	+0.5
2,010,276	+		MPMX19_01926	0.46	+0.4
2,010,276	+		MPMX19_01926	0.46	-0.1
2,010,277	-		MPMX19_01926	0.46	+0.2
2,010,277	-		MPMX19_01926	0.46	-0.6
2,010,277	-		MPMX19_01926	0.46	+0.3
2,010,277	-		MPMX19_01926	0.46	+0.8
2,010,282	+		MPMX19_01926	0.47	-0.9
2,010,282	+		MPMX19_01926	0.47	+0.3
2,010,282	+		MPMX19_01926	0.47	-1.7
2,010,282	+		MPMX19_01926	0.47	-2.6
2,010,282	+		MPMX19_01926	0.47	-0.3
2,010,282	+		MPMX19_01926	0.47	+1.1
2,010,282	+		MPMX19_01926	0.47	-1.1
2,010,282	+		MPMX19_01926	0.47	-0.1
2,010,282	+		MPMX19_01926	0.47	-0.4
2,010,282	+		MPMX19_01926	0.47	-0.2
2,010,282	+		MPMX19_01926	0.47	+0.7
2,010,282	+		MPMX19_01926	0.47	-1.8
2,010,282	+		MPMX19_01926	0.47	-1.2
2,010,283	-		MPMX19_01926	0.47	-1.4
2,010,283	-		MPMX19_01926	0.47	+1.2
2,010,283	-		MPMX19_01926	0.47	-1.6
2,010,283	-		MPMX19_01926	0.47	+0.5
2,010,283	-		MPMX19_01926	0.47	-1.4
2,010,283	-		MPMX19_01926	0.47	-1.5
2,010,283	-		MPMX19_01926	0.47	-0.2
2,010,283	-		MPMX19_01926	0.47	-1.7
2,010,283	-		MPMX19_01926	0.47	+0.3
2,010,283	-		MPMX19_01926	0.47	+0.0
2,010,283	-		MPMX19_01926	0.47	-0.1
2,010,283	-		MPMX19_01926	0.47	-0.5
2,010,283	-		MPMX19_01926	0.47	+0.8
2,010,314	-		MPMX19_01926	0.54	+1.0
2,010,428	+		MPMX19_01926	0.77	-1.3
2,010,428	+		MPMX19_01926	0.77	+0.6
2,010,429	-		MPMX19_01926	0.77	-0.1
2,010,429	-		MPMX19_01926	0.77	+0.8
2,010,429	-		MPMX19_01926	0.77	-1.6
2,010,523	-				-2.3
2,010,644	+				-1.2
2,010,644	+				-1.4
2,010,644	+				-1.4
2,010,645	-				+0.1
2,010,645	-				-0.6
2,010,645	-				-0.5
2,010,645	-				-0.7
2,010,779	+		MPMX19_01927	0.23	+0.5
2,010,779	+		MPMX19_01927	0.23	-0.9
2,010,779	+		MPMX19_01927	0.23	-2.7
2,010,779	+		MPMX19_01927	0.23	-1.5
2,010,779	+		MPMX19_01927	0.23	-2.2
2,010,779	+		MPMX19_01927	0.23	-0.4
2,010,779	+		MPMX19_01927	0.23	-0.3
2,010,779	+		MPMX19_01927	0.23	+2.4
2,010,779	+		MPMX19_01927	0.23	-1.4
2,010,779	+		MPMX19_01927	0.23	-0.7
2,010,779	+		MPMX19_01927	0.23	+0.5
2,010,779	+		MPMX19_01927	0.23	+1.0
2,010,779	+		MPMX19_01927	0.23	+0.5
2,010,779	+		MPMX19_01927	0.23	-0.7
2,010,779	+		MPMX19_01927	0.23	-0.2
2,010,779	+		MPMX19_01927	0.23	-1.1
2,010,779	+		MPMX19_01927	0.23	-1.8
2,010,779	+		MPMX19_01927	0.23	-1.1
2,010,779	+		MPMX19_01927	0.23	+0.1
2,010,780	-		MPMX19_01927	0.23	-0.7
2,010,780	-		MPMX19_01927	0.23	+0.4
2,010,780	-		MPMX19_01927	0.23	-0.6
2,010,780	-		MPMX19_01927	0.23	-0.4
2,010,780	-		MPMX19_01927	0.23	-0.9
2,010,780	-		MPMX19_01927	0.23	-0.4
2,010,780	-		MPMX19_01927	0.23	-1.1
2,010,780	-		MPMX19_01927	0.23	-0.5
2,010,780	-		MPMX19_01927	0.23	+0.1
2,010,780	-		MPMX19_01927	0.23	-0.6
2,010,780	-		MPMX19_01927	0.23	-1.3
2,010,780	-		MPMX19_01927	0.23	-1.1
2,010,780	-		MPMX19_01927	0.23	-2.6
2,010,780	-		MPMX19_01927	0.23	+0.2
2,010,780	-		MPMX19_01927	0.23	+0.2
2,010,780	-		MPMX19_01927	0.23	-2.6
2,010,780	-		MPMX19_01927	0.23	-1.8
2,010,780	-		MPMX19_01927	0.23	-1.6
2,010,780	-		MPMX19_01927	0.23	-0.0
2,010,780	-		MPMX19_01927	0.23	-0.5
2,011,227	-				-0.9
2,011,471	+		MPMX19_01928	0.15	-0.2
2,011,471	+		MPMX19_01928	0.15	+1.1
2,011,471	+		MPMX19_01928	0.15	-0.7
2,011,471	+		MPMX19_01928	0.15	-0.9
2,011,472	-		MPMX19_01928	0.15	+0.8
2,011,472	-		MPMX19_01928	0.15	-1.6
2,011,472	-		MPMX19_01928	0.15	+0.3
2,011,472	-		MPMX19_01928	0.15	-0.6