Strain Fitness in Rhodanobacter sp. FW510-T8 around OKGIIK_09780

Experiment: R2A_PIPES pH 4.25

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A_PIPES pH 4.25
2,107,007	+		OKGIIK_09770	0.23	-0.1
2,107,007	+		OKGIIK_09770	0.23	-0.8
2,107,008	-		OKGIIK_09770	0.23	+0.2
2,107,008	-		OKGIIK_09770	0.23	+0.7
2,107,008	-		OKGIIK_09770	0.23	+0.9
2,107,022	+		OKGIIK_09770	0.25	-0.4
2,107,023	-		OKGIIK_09770	0.25	+1.3
2,107,082	+		OKGIIK_09770	0.34	+2.0
2,107,082	+		OKGIIK_09770	0.34	-0.3
2,107,082	+		OKGIIK_09770	0.34	-1.2
2,107,082	+		OKGIIK_09770	0.34	-1.0
2,107,082	+		OKGIIK_09770	0.34	-1.3
2,107,082	+		OKGIIK_09770	0.34	-1.2
2,107,082	+		OKGIIK_09770	0.34	-0.5
2,107,082	+		OKGIIK_09770	0.34	+0.4
2,107,083	-		OKGIIK_09770	0.34	+0.3
2,107,083	-		OKGIIK_09770	0.34	-0.2
2,107,083	-		OKGIIK_09770	0.34	+0.6
2,107,083	-		OKGIIK_09770	0.34	-1.0
2,107,083	-		OKGIIK_09770	0.34	+1.4
2,107,083	-		OKGIIK_09770	0.34	-1.6
2,107,083	-		OKGIIK_09770	0.34	-0.8
2,107,086	-		OKGIIK_09770	0.34	+0.2
2,107,086	-		OKGIIK_09770	0.34	-0.7
2,107,086	-		OKGIIK_09770	0.34	-0.4
2,107,097	+		OKGIIK_09770	0.36	+0.4
2,107,097	+		OKGIIK_09770	0.36	-0.1
2,107,097	+		OKGIIK_09770	0.36	-0.8
2,107,098	-		OKGIIK_09770	0.36	-1.2
2,107,098	-		OKGIIK_09770	0.36	-0.2
2,107,343	+		OKGIIK_09770	0.72	-0.6
2,107,343	+		OKGIIK_09770	0.72	-1.1
2,107,343	+		OKGIIK_09770	0.72	+0.2
2,107,343	+		OKGIIK_09770	0.72	-1.4
2,107,343	+		OKGIIK_09770	0.72	-0.8
2,107,344	-		OKGIIK_09770	0.72	-0.4
2,107,344	-		OKGIIK_09770	0.72	-1.4
2,107,543	+				-0.7
2,107,543	+				-0.2
2,107,543	+				-0.7
2,107,543	+				-1.6
2,107,543	+				-1.6
2,107,543	+				-0.4
2,107,543	+				+0.1
2,107,543	+				+0.2
2,107,543	+				+0.2
2,107,543	+				-0.2
2,107,543	+				-0.4
2,107,543	+				+0.9
2,107,543	+				-0.8
2,107,543	+				-2.5
2,107,543	+				-1.8
2,107,543	+				-0.2
2,107,543	+				+0.1
2,107,544	-				-0.4
2,107,544	-				+1.2
2,107,544	-				+0.7
2,107,544	-				+0.8
2,107,544	-				-0.1
2,107,544	-				-1.5
2,107,544	-				-0.3
2,107,544	-				+0.2
2,107,544	-				+0.4
2,107,544	-				-0.0
2,107,544	-				+0.8
2,107,544	-				+0.6
2,107,544	-				-0.4
2,107,544	-				+0.5
2,107,544	-				-0.8
2,107,544	-				+0.8
2,107,544	-				-0.7
2,107,544	-				-0.3
2,107,580	+				-2.3
2,107,581	-				+0.3
2,107,581	-				+0.4
2,107,581	-				+0.6
2,107,581	-				-1.5
2,107,581	-				-0.8
2,107,581	-				-0.4
2,107,613	+		OKGIIK_09775	0.19	+0.8
2,107,613	+		OKGIIK_09775	0.19	-0.1
2,107,613	+		OKGIIK_09775	0.19	-0.8
2,107,613	+		OKGIIK_09775	0.19	+0.2
2,107,613	+		OKGIIK_09775	0.19	-2.0
2,107,613	+		OKGIIK_09775	0.19	-0.7
2,107,613	+		OKGIIK_09775	0.19	-1.4
2,107,613	+		OKGIIK_09775	0.19	-0.0
2,107,613	+		OKGIIK_09775	0.19	+0.5
2,107,613	+		OKGIIK_09775	0.19	+1.4
2,107,613	+		OKGIIK_09775	0.19	+1.7
2,107,613	+		OKGIIK_09775	0.19	-0.7
2,107,614	-		OKGIIK_09775	0.19	+0.8
2,107,614	-		OKGIIK_09775	0.19	-0.9
2,107,614	-		OKGIIK_09775	0.19	+0.1
2,107,614	-		OKGIIK_09775	0.19	+0.5
2,107,614	-		OKGIIK_09775	0.19	+0.4
2,107,614	-		OKGIIK_09775	0.19	+0.7
2,107,614	-		OKGIIK_09775	0.19	+0.4
2,107,614	-		OKGIIK_09775	0.19	-1.8
2,107,614	-		OKGIIK_09775	0.19	-0.6
2,107,614	-		OKGIIK_09775	0.19	+0.4
2,107,614	-		OKGIIK_09775	0.19	+0.9
2,107,614	-		OKGIIK_09775	0.19	-1.4
2,107,614	-		OKGIIK_09775	0.19	+0.3
2,107,722	+		OKGIIK_09775	0.58	+2.3
2,107,722	+		OKGIIK_09775	0.58	-2.5
2,107,757	+		OKGIIK_09775	0.71	-1.1
2,107,757	+		OKGIIK_09775	0.71	-0.9
2,107,757	+		OKGIIK_09775	0.71	+0.3
2,107,757	+		OKGIIK_09775	0.71	+0.7
2,107,757	+		OKGIIK_09775	0.71	+0.1
2,107,758	-		OKGIIK_09775	0.71	+0.7
2,107,758	-		OKGIIK_09775	0.71	-1.1
2,107,766	-		OKGIIK_09775	0.74	+1.1
2,107,870	+				-0.6
2,107,870	+				+0.2
2,107,870	+				-0.1
2,107,870	+				-0.8
2,107,870	+				-0.6
2,107,870	+				-2.3
2,107,870	+				-0.7
2,107,870	+				+0.5
2,107,870	+				+0.1
2,107,870	+				-0.8
2,107,870	+				-1.4
2,107,870	+				-0.1
2,107,871	-				-0.4
2,107,871	-				-1.4
2,107,871	-				-0.8
2,107,871	-				-0.6
2,107,871	-				+0.5
2,107,871	-				+0.6
2,107,871	-				-0.7
2,107,871	-				-0.8
2,107,872	-				+0.4
2,108,075	+		OKGIIK_09780	0.22	-1.0
2,108,153	+		OKGIIK_09780	0.40	-1.3
2,108,154	-		OKGIIK_09780	0.40	-0.1
2,108,442	-				+0.2
2,108,546	+		OKGIIK_09785	0.11	+1.5
2,108,546	+		OKGIIK_09785	0.11	+0.6
2,108,547	-		OKGIIK_09785	0.12	+1.0
2,108,560	+		OKGIIK_09785	0.13	-2.2
2,108,560	+		OKGIIK_09785	0.13	+0.7
2,108,561	-		OKGIIK_09785	0.13	-1.4
2,108,797	+		OKGIIK_09785	0.34	-0.8
2,108,797	+		OKGIIK_09785	0.34	+0.8
2,108,797	+		OKGIIK_09785	0.34	-1.4
2,108,797	+		OKGIIK_09785	0.34	-0.1
2,108,798	-		OKGIIK_09785	0.34	-2.8
2,108,798	-		OKGIIK_09785	0.34	-0.7
2,108,798	-		OKGIIK_09785	0.34	+0.2
2,108,970	+		OKGIIK_09785	0.50	+0.5
2,108,971	-		OKGIIK_09785	0.50	-0.0
2,109,064	+		OKGIIK_09785	0.59	-1.3
2,109,064	+		OKGIIK_09785	0.59	-0.6
2,109,064	+		OKGIIK_09785	0.59	-0.6
2,109,064	+		OKGIIK_09785	0.59	-0.8
2,109,064	+		OKGIIK_09785	0.59	-1.2
2,109,064	+		OKGIIK_09785	0.59	+0.7
2,109,064	+		OKGIIK_09785	0.59	-0.6
2,109,064	+		OKGIIK_09785	0.59	-0.2
2,109,064	+		OKGIIK_09785	0.59	-0.6
2,109,064	+		OKGIIK_09785	0.59	-0.1
2,109,064	+		OKGIIK_09785	0.59	-0.1
2,109,064	+		OKGIIK_09785	0.59	-1.4
2,109,064	+		OKGIIK_09785	0.59	+0.2
2,109,064	+		OKGIIK_09785	0.59	+0.3
2,109,064	+		OKGIIK_09785	0.59	+0.4
2,109,064	+		OKGIIK_09785	0.59	-0.4
2,109,064	+		OKGIIK_09785	0.59	-2.6
2,109,065	-		OKGIIK_09785	0.59	+1.2
2,109,065	-		OKGIIK_09785	0.59	-1.0
2,109,065	-		OKGIIK_09785	0.59	-1.3
2,109,065	-		OKGIIK_09785	0.59	+1.2
2,109,065	-		OKGIIK_09785	0.59	-1.8
2,109,065	-		OKGIIK_09785	0.59	+0.4
2,109,065	-		OKGIIK_09785	0.59	+0.7
2,109,065	-		OKGIIK_09785	0.59	+0.1
2,109,065	-		OKGIIK_09785	0.59	-0.0
2,109,065	-		OKGIIK_09785	0.59	-0.8
2,109,065	-		OKGIIK_09785	0.59	-0.6
2,109,065	-		OKGIIK_09785	0.59	-0.2
2,109,065	-		OKGIIK_09785	0.59	+0.0
2,109,065	-		OKGIIK_09785	0.59	-0.3
2,109,238	+		OKGIIK_09785	0.75	-0.8
2,109,238	+		OKGIIK_09785	0.75	-1.6
2,109,238	+		OKGIIK_09785	0.75	-0.1
2,109,238	+		OKGIIK_09785	0.75	-1.7
2,109,238	+		OKGIIK_09785	0.75	+0.2
2,109,238	+		OKGIIK_09785	0.75	-1.6
2,109,238	+		OKGIIK_09785	0.75	+0.2
2,109,238	+		OKGIIK_09785	0.75	+0.4
2,109,239	-		OKGIIK_09785	0.75	-1.1
2,109,239	-		OKGIIK_09785	0.75	+1.0
2,109,239	-		OKGIIK_09785	0.75	+0.4
2,109,239	-		OKGIIK_09785	0.75	-0.1
2,109,239	-		OKGIIK_09785	0.75	+0.1
2,109,239	-		OKGIIK_09785	0.75	-1.2
2,109,239	-		OKGIIK_09785	0.75	-1.0
2,109,305	-		OKGIIK_09785	0.81	-1.3