Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02541

Experiment: Urea (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02539 and MPMX26_02540 are separated by 26 nucleotidesMPMX26_02540 and MPMX26_02541 are separated by 85 nucleotidesMPMX26_02541 and MPMX26_02542 are separated by 284 nucleotides MPMX26_02539: MPMX26_02539 - hypothetical protein, at 2,626,913 to 2,627,335 _02539 MPMX26_02540: MPMX26_02540 - Flavodoxin/ferredoxin--NADP reductase, at 2,627,362 to 2,628,123 _02540 MPMX26_02541: MPMX26_02541 - HTH-type transcriptional regulator CysL, at 2,628,209 to 2,629,090 _02541 MPMX26_02542: MPMX26_02542 - Uracil phosphoribosyltransferase, at 2,629,375 to 2,630,010 _02542 Position (kb) 2628 2629 2630Strain fitness (log2 ratio) -3 -2 -1 0 1at 2627.232 kb on + strand, within MPMX26_02539at 2627.232 kb on + strand, within MPMX26_02539at 2627.244 kb on + strand, within MPMX26_02539at 2627.249 kb on + strand, within MPMX26_02539at 2627.264 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.274 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.279 kb on + strand, within MPMX26_02539at 2627.347 kb on - strandat 2628.199 kb on + strandat 2628.251 kb on + strandat 2628.259 kb on + strandat 2628.274 kb on + strandat 2628.310 kb on + strand, within MPMX26_02541at 2628.312 kb on + strand, within MPMX26_02541at 2628.312 kb on + strand, within MPMX26_02541at 2628.312 kb on + strand, within MPMX26_02541at 2628.312 kb on + strand, within MPMX26_02541at 2628.331 kb on + strand, within MPMX26_02541at 2628.338 kb on + strand, within MPMX26_02541at 2628.367 kb on + strand, within MPMX26_02541at 2628.367 kb on + strand, within MPMX26_02541at 2628.368 kb on + strand, within MPMX26_02541at 2628.444 kb on + strand, within MPMX26_02541at 2628.494 kb on + strand, within MPMX26_02541at 2628.553 kb on + strand, within MPMX26_02541at 2628.577 kb on + strand, within MPMX26_02541at 2628.577 kb on + strand, within MPMX26_02541at 2628.586 kb on + strand, within MPMX26_02541at 2628.587 kb on + strand, within MPMX26_02541at 2628.651 kb on + strand, within MPMX26_02541at 2628.678 kb on + strand, within MPMX26_02541at 2628.704 kb on + strand, within MPMX26_02541at 2628.711 kb on + strand, within MPMX26_02541at 2628.729 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.739 kb on + strand, within MPMX26_02541at 2628.800 kb on + strand, within MPMX26_02541at 2628.841 kb on + strand, within MPMX26_02541at 2628.905 kb on + strand, within MPMX26_02541at 2628.982 kb on + strand, within MPMX26_02541at 2628.989 kb on + strand, within MPMX26_02541at 2629.364 kb on - strandat 2629.420 kb on - strandat 2629.424 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.425 kb on - strandat 2629.436 kb on - strandat 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.441 kb on - strand, within MPMX26_02542at 2629.576 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.612 kb on - strand, within MPMX26_02542at 2629.622 kb on - strand, within MPMX26_02542at 2629.622 kb on - strand, within MPMX26_02542at 2629.635 kb on - strand, within MPMX26_02542at 2629.670 kb on - strand, within MPMX26_02542at 2629.691 kb on - strand, within MPMX26_02542at 2629.691 kb on - strand, within MPMX26_02542at 2629.712 kb on - strand, within MPMX26_02542at 2629.712 kb on - strand, within MPMX26_02542at 2629.719 kb on - strand, within MPMX26_02542at 2629.824 kb on - strand, within MPMX26_02542at 2629.840 kb on - strand, within MPMX26_02542at 2629.841 kb on - strand, within MPMX26_02542at 2629.970 kb on - strandat 2630.013 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
remove
2,627,232 + MPMX26_02539 0.75 -1.5
2,627,232 + MPMX26_02539 0.75 +0.4
2,627,244 + MPMX26_02539 0.78 +0.1
2,627,249 + MPMX26_02539 0.79 -0.1
2,627,264 + MPMX26_02539 0.83 +0.1
2,627,274 + MPMX26_02539 0.85 +0.4
2,627,274 + MPMX26_02539 0.85 +0.3
2,627,274 + MPMX26_02539 0.85 -0.9
2,627,274 + MPMX26_02539 0.85 +0.4
2,627,274 + MPMX26_02539 0.85 +0.0
2,627,274 + MPMX26_02539 0.85 +0.0
2,627,274 + MPMX26_02539 0.85 +0.7
2,627,274 + MPMX26_02539 0.85 -0.3
2,627,274 + MPMX26_02539 0.85 -0.0
2,627,274 + MPMX26_02539 0.85 +0.2
2,627,274 + MPMX26_02539 0.85 +0.2
2,627,279 + MPMX26_02539 0.87 +0.1
2,627,279 + MPMX26_02539 0.87 +0.0
2,627,279 + MPMX26_02539 0.87 +0.4
2,627,279 + MPMX26_02539 0.87 +0.3
2,627,279 + MPMX26_02539 0.87 +0.2
2,627,347 - +0.3
2,628,199 + -0.2
2,628,251 + -0.7
2,628,259 + -2.5
2,628,274 + -1.7
2,628,310 + MPMX26_02541 0.11 -0.3
2,628,312 + MPMX26_02541 0.12 -1.9
2,628,312 + MPMX26_02541 0.12 -1.7
2,628,312 + MPMX26_02541 0.12 -0.8
2,628,312 + MPMX26_02541 0.12 -1.5
2,628,331 + MPMX26_02541 0.14 -1.5
2,628,338 + MPMX26_02541 0.15 -1.3
2,628,367 + MPMX26_02541 0.18 -2.9
2,628,367 + MPMX26_02541 0.18 -0.9
2,628,368 + MPMX26_02541 0.18 -1.3
2,628,444 + MPMX26_02541 0.27 -1.3
2,628,494 + MPMX26_02541 0.32 -0.9
2,628,553 + MPMX26_02541 0.39 -1.9
2,628,577 + MPMX26_02541 0.42 -0.1
2,628,577 + MPMX26_02541 0.42 -1.5
2,628,586 + MPMX26_02541 0.43 -1.7
2,628,587 + MPMX26_02541 0.43 -2.2
2,628,651 + MPMX26_02541 0.50 -2.7
2,628,678 + MPMX26_02541 0.53 -1.8
2,628,704 + MPMX26_02541 0.56 -1.7
2,628,711 + MPMX26_02541 0.57 -0.7
2,628,729 + MPMX26_02541 0.59 -0.9
2,628,739 + MPMX26_02541 0.60 -0.7
2,628,739 + MPMX26_02541 0.60 -1.1
2,628,739 + MPMX26_02541 0.60 -3.5
2,628,739 + MPMX26_02541 0.60 -0.1
2,628,800 + MPMX26_02541 0.67 -2.2
2,628,841 + MPMX26_02541 0.72 -3.1
2,628,905 + MPMX26_02541 0.79 -1.3
2,628,982 + MPMX26_02541 0.88 -2.5
2,628,989 + MPMX26_02541 0.88 -0.9
2,629,364 - +0.0
2,629,420 - -0.5
2,629,424 - -0.8
2,629,425 - -0.3
2,629,425 - -0.4
2,629,425 - +0.3
2,629,425 - -0.2
2,629,425 - +0.3
2,629,425 - -0.1
2,629,425 - -0.1
2,629,425 - -0.2
2,629,425 - -0.0
2,629,436 - +0.2
2,629,441 - MPMX26_02542 0.10 -0.5
2,629,441 - MPMX26_02542 0.10 -0.4
2,629,441 - MPMX26_02542 0.10 +0.0
2,629,441 - MPMX26_02542 0.10 +0.2
2,629,441 - MPMX26_02542 0.10 -0.3
2,629,441 - MPMX26_02542 0.10 +0.9
2,629,441 - MPMX26_02542 0.10 -0.5
2,629,441 - MPMX26_02542 0.10 +0.0
2,629,441 - MPMX26_02542 0.10 -0.1
2,629,441 - MPMX26_02542 0.10 +0.1
2,629,441 - MPMX26_02542 0.10 -0.1
2,629,441 - MPMX26_02542 0.10 -0.2
2,629,441 - MPMX26_02542 0.10 -0.1
2,629,576 - MPMX26_02542 0.32 -0.1
2,629,612 - MPMX26_02542 0.37 +0.1
2,629,612 - MPMX26_02542 0.37 -0.7
2,629,612 - MPMX26_02542 0.37 +0.3
2,629,612 - MPMX26_02542 0.37 -0.4
2,629,612 - MPMX26_02542 0.37 -0.2
2,629,622 - MPMX26_02542 0.39 -0.2
2,629,622 - MPMX26_02542 0.39 -0.6
2,629,635 - MPMX26_02542 0.41 -0.1
2,629,670 - MPMX26_02542 0.46 +0.5
2,629,691 - MPMX26_02542 0.50 -0.3
2,629,691 - MPMX26_02542 0.50 -0.0
2,629,712 - MPMX26_02542 0.53 +0.3
2,629,712 - MPMX26_02542 0.53 +0.4
2,629,719 - MPMX26_02542 0.54 -0.0
2,629,824 - MPMX26_02542 0.71 +0.1
2,629,840 - MPMX26_02542 0.73 +0.5
2,629,841 - MPMX26_02542 0.73 -0.2
2,629,970 - -0.3
2,630,013 - -0.3

Or see this region's nucleotide sequence