Experiment: Ethanolamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01227 and MPMX26_01228 overlap by 4 nucleotides MPMX26_01228 and MPMX26_01229 are separated by 22 nucleotides MPMX26_01229 and MPMX26_01230 are separated by 96 nucleotides MPMX26_01230 and MPMX26_01231 are separated by 44 nucleotides
MPMX26_01227: MPMX26_01227 - hypothetical protein, at 1,300,521 to 1,300,907
_01227
MPMX26_01228: MPMX26_01228 - Type II secretion system protein J, at 1,300,904 to 1,301,539
_01228
MPMX26_01229: MPMX26_01229 - Type II secretion system protein K, at 1,301,562 to 1,302,506
_01229
MPMX26_01230: MPMX26_01230 - hypothetical protein, at 1,302,603 to 1,303,199
_01230
MPMX26_01231: MPMX26_01231 - Uracil-DNA glycosylase, at 1,303,244 to 1,303,957
_01231
Position (kb)
1301
1302
1303 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1300.700 kb on + strand, within MPMX26_01227 at 1300.709 kb on + strand, within MPMX26_01227 at 1300.743 kb on + strand, within MPMX26_01227 at 1300.823 kb on + strand, within MPMX26_01227 at 1300.823 kb on + strand, within MPMX26_01227 at 1300.831 kb on - strand, within MPMX26_01227 at 1300.833 kb on + strand, within MPMX26_01227 at 1300.930 kb on + strand at 1300.978 kb on + strand, within MPMX26_01228 at 1302.585 kb on + strand at 1302.635 kb on + strand at 1302.635 kb on + strand at 1302.635 kb on + strand at 1302.635 kb on + strand at 1302.700 kb on + strand, within MPMX26_01230 at 1302.713 kb on + strand, within MPMX26_01230 at 1302.747 kb on + strand, within MPMX26_01230 at 1302.747 kb on + strand, within MPMX26_01230 at 1302.747 kb on + strand, within MPMX26_01230 at 1302.754 kb on + strand, within MPMX26_01230 at 1302.764 kb on + strand, within MPMX26_01230 at 1302.764 kb on + strand, within MPMX26_01230 at 1302.764 kb on + strand, within MPMX26_01230 at 1302.796 kb on + strand, within MPMX26_01230 at 1302.796 kb on + strand, within MPMX26_01230 at 1302.796 kb on + strand, within MPMX26_01230 at 1302.807 kb on + strand, within MPMX26_01230 at 1302.839 kb on + strand, within MPMX26_01230 at 1302.841 kb on + strand, within MPMX26_01230 at 1302.841 kb on + strand, within MPMX26_01230 at 1302.872 kb on + strand, within MPMX26_01230 at 1302.874 kb on + strand, within MPMX26_01230 at 1302.874 kb on + strand, within MPMX26_01230 at 1302.888 kb on + strand, within MPMX26_01230 at 1302.888 kb on + strand, within MPMX26_01230 at 1302.898 kb on + strand, within MPMX26_01230 at 1302.898 kb on + strand, within MPMX26_01230 at 1302.898 kb on + strand, within MPMX26_01230 at 1302.898 kb on + strand, within MPMX26_01230 at 1302.900 kb on + strand, within MPMX26_01230 at 1302.900 kb on + strand, within MPMX26_01230 at 1302.928 kb on + strand, within MPMX26_01230 at 1302.933 kb on + strand, within MPMX26_01230 at 1302.960 kb on + strand, within MPMX26_01230 at 1302.965 kb on + strand, within MPMX26_01230 at 1302.981 kb on + strand, within MPMX26_01230 at 1303.014 kb on + strand, within MPMX26_01230 at 1303.014 kb on + strand, within MPMX26_01230 at 1303.014 kb on + strand, within MPMX26_01230 at 1303.075 kb on + strand, within MPMX26_01230 at 1303.103 kb on + strand, within MPMX26_01230 at 1303.141 kb on + strand at 1303.141 kb on + strand at 1303.141 kb on + strand at 1303.220 kb on + strand at 1303.251 kb on + strand at 1303.256 kb on + strand at 1303.282 kb on + strand at 1303.282 kb on + strand at 1303.340 kb on + strand, within MPMX26_01231 at 1303.431 kb on + strand, within MPMX26_01231 at 1303.437 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.447 kb on + strand, within MPMX26_01231 at 1303.485 kb on + strand, within MPMX26_01231 at 1303.485 kb on + strand, within MPMX26_01231 at 1303.485 kb on + strand, within MPMX26_01231 at 1303.485 kb on + strand, within MPMX26_01231 at 1303.485 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231 at 1303.490 kb on + strand, within MPMX26_01231
Per-strain Table
Position Strand Gene LocusTag Fraction Ethanolamine (N) remove 1,300,700 + MPMX26_01227 0.46 +0.7 1,300,709 + MPMX26_01227 0.49 -1.8 1,300,743 + MPMX26_01227 0.57 -1.2 1,300,823 + MPMX26_01227 0.78 -1.2 1,300,823 + MPMX26_01227 0.78 -0.1 1,300,831 - MPMX26_01227 0.80 -1.5 1,300,833 + MPMX26_01227 0.81 +0.6 1,300,930 + +0.2 1,300,978 + MPMX26_01228 0.12 -1.7 1,302,585 + -1.4 1,302,635 + -1.1 1,302,635 + -1.8 1,302,635 + -2.0 1,302,635 + -1.2 1,302,700 + MPMX26_01230 0.16 -2.7 1,302,713 + MPMX26_01230 0.18 -3.0 1,302,747 + MPMX26_01230 0.24 -1.9 1,302,747 + MPMX26_01230 0.24 -2.2 1,302,747 + MPMX26_01230 0.24 +0.1 1,302,754 + MPMX26_01230 0.25 -2.3 1,302,764 + MPMX26_01230 0.27 -3.1 1,302,764 + MPMX26_01230 0.27 -2.0 1,302,764 + MPMX26_01230 0.27 -0.5 1,302,796 + MPMX26_01230 0.32 -1.6 1,302,796 + MPMX26_01230 0.32 -0.1 1,302,796 + MPMX26_01230 0.32 -3.1 1,302,807 + MPMX26_01230 0.34 -4.3 1,302,839 + MPMX26_01230 0.40 -3.6 1,302,841 + MPMX26_01230 0.40 -2.6 1,302,841 + MPMX26_01230 0.40 -2.9 1,302,872 + MPMX26_01230 0.45 -2.7 1,302,874 + MPMX26_01230 0.45 -2.0 1,302,874 + MPMX26_01230 0.45 -1.5 1,302,888 + MPMX26_01230 0.48 -2.4 1,302,888 + MPMX26_01230 0.48 -2.1 1,302,898 + MPMX26_01230 0.49 -1.6 1,302,898 + MPMX26_01230 0.49 -2.6 1,302,898 + MPMX26_01230 0.49 -0.6 1,302,898 + MPMX26_01230 0.49 -2.3 1,302,900 + MPMX26_01230 0.50 -1.4 1,302,900 + MPMX26_01230 0.50 -1.9 1,302,928 + MPMX26_01230 0.54 -1.3 1,302,933 + MPMX26_01230 0.55 -2.2 1,302,960 + MPMX26_01230 0.60 -3.6 1,302,965 + MPMX26_01230 0.61 -2.6 1,302,981 + MPMX26_01230 0.63 -1.7 1,303,014 + MPMX26_01230 0.69 -2.5 1,303,014 + MPMX26_01230 0.69 -2.3 1,303,014 + MPMX26_01230 0.69 -1.4 1,303,075 + MPMX26_01230 0.79 -2.7 1,303,103 + MPMX26_01230 0.84 -2.7 1,303,141 + -3.0 1,303,141 + -3.5 1,303,141 + -2.2 1,303,220 + -2.2 1,303,251 + -3.0 1,303,256 + -0.5 1,303,282 + -1.3 1,303,282 + -2.0 1,303,340 + MPMX26_01231 0.13 -1.4 1,303,431 + MPMX26_01231 0.26 -3.3 1,303,437 + MPMX26_01231 0.27 -3.2 1,303,447 + MPMX26_01231 0.28 -1.4 1,303,447 + MPMX26_01231 0.28 -0.0 1,303,447 + MPMX26_01231 0.28 -2.3 1,303,447 + MPMX26_01231 0.28 -1.6 1,303,447 + MPMX26_01231 0.28 -1.1 1,303,447 + MPMX26_01231 0.28 -1.9 1,303,447 + MPMX26_01231 0.28 -1.8 1,303,447 + MPMX26_01231 0.28 -2.2 1,303,447 + MPMX26_01231 0.28 -1.7 1,303,447 + MPMX26_01231 0.28 -1.8 1,303,447 + MPMX26_01231 0.28 -1.5 1,303,447 + MPMX26_01231 0.28 -0.3 1,303,447 + MPMX26_01231 0.28 -1.7 1,303,485 + MPMX26_01231 0.34 -2.4 1,303,485 + MPMX26_01231 0.34 -1.0 1,303,485 + MPMX26_01231 0.34 -4.0 1,303,485 + MPMX26_01231 0.34 -3.2 1,303,485 + MPMX26_01231 0.34 -2.9 1,303,490 + MPMX26_01231 0.34 -1.8 1,303,490 + MPMX26_01231 0.34 -1.4 1,303,490 + MPMX26_01231 0.34 -2.3 1,303,490 + MPMX26_01231 0.34 -1.3 1,303,490 + MPMX26_01231 0.34 -1.7 1,303,490 + MPMX26_01231 0.34 -1.4
Or see this region's nucleotide sequence