Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05425

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	NL-CCM, start OD=0.3
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114,783	+	MPMX19_05424	0.37	-0.2
114,783	+	MPMX19_05424	0.37	+0.1
114,783	+	MPMX19_05424	0.37	+0.3
114,783	+	MPMX19_05424	0.37	-0.2
114,783	+	MPMX19_05424	0.37	-0.2
114,783	+	MPMX19_05424	0.37	-1.2
114,783	+	MPMX19_05424	0.37	-1.9
114,783	+	MPMX19_05424	0.37	+0.0
114,783	+	MPMX19_05424	0.37	+0.2
114,783	+	MPMX19_05424	0.37	-0.1
114,783	+	MPMX19_05424	0.37	-1.2
114,783	+	MPMX19_05424	0.37	-0.9
114,783	+	MPMX19_05424	0.37	+0.2
114,783	+	MPMX19_05424	0.37	-0.2
114,783	+	MPMX19_05424	0.37	+0.5
114,783	+	MPMX19_05424	0.37	+0.4
114,783	+	MPMX19_05424	0.37	-1.1
114,783	+	MPMX19_05424	0.37	-0.2
114,783	+	MPMX19_05424	0.37	+0.0
114,783	+	MPMX19_05424	0.37	+0.7
114,784	-	MPMX19_05424	0.37	-2.1
114,784	-	MPMX19_05424	0.37	-0.1
114,784	-	MPMX19_05424	0.37	-2.7
114,784	-	MPMX19_05424	0.37	-0.1
114,784	-	MPMX19_05424	0.37	-1.7
114,784	-	MPMX19_05424	0.37	-1.6
114,784	-	MPMX19_05424	0.37	+0.5
114,784	-	MPMX19_05424	0.37	+0.5
114,784	-	MPMX19_05424	0.37	-0.7
114,784	-	MPMX19_05424	0.37	-1.5
114,784	-	MPMX19_05424	0.37	+0.4
114,784	-	MPMX19_05424	0.37	-1.1
114,784	-	MPMX19_05424	0.37	-0.2
114,784	-	MPMX19_05424	0.37	-0.2
114,784	-	MPMX19_05424	0.37	-0.1
114,784	-	MPMX19_05424	0.37	+0.5
114,784	-	MPMX19_05424	0.37	-1.1
114,784	-	MPMX19_05424	0.37	+0.7
114,923	+	MPMX19_05424	0.49	-0.7
114,923	+	MPMX19_05424	0.49	-0.6
114,924	-	MPMX19_05424	0.50	+0.1
115,062	+	MPMX19_05424	0.62	-0.7
115,062	+	MPMX19_05424	0.62	+0.1
115,062	+	MPMX19_05424	0.62	+1.1
115,062	+	MPMX19_05424	0.62	-1.3
115,063	-	MPMX19_05424	0.62	-1.8
115,063	-	MPMX19_05424	0.62	-0.5
115,063	-	MPMX19_05424	0.62	+1.1
115,063	-	MPMX19_05424	0.62	-1.0
115,089	+	MPMX19_05424	0.65	-0.2
115,089	+	MPMX19_05424	0.65	-1.1
115,089	+	MPMX19_05424	0.65	-2.3
115,090	-	MPMX19_05424	0.65	-2.2
115,090	-	MPMX19_05424	0.65	+0.5
115,090	-	MPMX19_05424	0.65	-1.6
115,090	-	MPMX19_05424	0.65	-0.9
115,090	-	MPMX19_05424	0.65	-1.3
115,090	-	MPMX19_05424	0.65	-1.1
115,097	+	MPMX19_05424	0.65	+0.2
115,257	+	MPMX19_05424	0.80	-0.3
115,257	+	MPMX19_05424	0.80	+0.1
115,257	+	MPMX19_05424	0.80	-1.6
115,257	+	MPMX19_05424	0.80	-1.3
115,257	+	MPMX19_05424	0.80	-1.6
115,257	+	MPMX19_05424	0.80	-2.2
115,257	+	MPMX19_05424	0.80	-0.4
115,258	-	MPMX19_05424	0.80	-0.5
115,258	-	MPMX19_05424	0.80	-0.5
115,258	-	MPMX19_05424	0.80	-0.9
115,258	-	MPMX19_05424	0.80	-0.6
115,258	-	MPMX19_05424	0.80	+0.3
115,258	-	MPMX19_05424	0.80	-0.5
115,474	-			+0.5
115,505	+			-1.1
115,505	+			-0.3
115,565	+			-0.7
115,565	+			+1.4
115,565	+			+0.2
115,565	+			+0.3
115,565	+			-1.1
115,565	+			-0.5
115,565	+			-0.6
115,565	+			-1.6
115,565	+			+0.1
115,565	+			-0.5
115,565	+			-0.6
115,565	+			+0.5
115,565	+			-0.5
115,565	+			+0.5
115,565	+			+0.0
115,565	+			+0.1
115,565	+			-1.5
115,566	-			-0.9
115,566	-			-0.9
115,566	-			+0.3
115,566	-			-1.1
115,566	-			+0.2
115,566	-			-1.1
115,566	-			-1.0
115,566	-			+0.1
115,566	-			+0.1
115,566	-			-0.5
115,566	-			-0.3
115,566	-			-1.7
115,566	-			+0.1
115,566	-			-1.5
115,566	-			-0.7
115,566	-			+0.8
115,566	-			-2.0
115,640	+			+0.3
115,640	+			+0.5
115,640	+			-1.1
115,640	+			-1.8
115,640	+			+0.1
115,640	+			-0.9
115,640	+			+0.2
115,640	+			-1.1
115,640	+			+0.1
115,640	+			-0.5
115,640	+			-0.5
115,640	+			-0.9
115,640	+			+0.7
115,640	+			+0.9
115,640	+			-0.1
115,640	+			-0.3
115,640	+			-1.1
115,641	-			-2.1
115,641	-			-1.1
115,641	-			-1.3
115,641	-			+0.5
115,641	-			-0.6
115,641	-			+0.7
115,641	-			+0.2
115,641	-			+0.4
115,641	-			-0.3
115,641	-			-2.1
115,641	-			-1.1
115,641	-			-1.2
115,641	-			-0.7
115,763	+			+0.2
115,763	+			-0.9
115,763	+			-2.0
115,763	+			-2.1
115,894	-	MPMX19_05425	0.17	-1.2
115,913	+	MPMX19_05425	0.18	-2.2
115,913	+	MPMX19_05425	0.18	-1.6
115,913	+	MPMX19_05425	0.18	+0.1
115,913	+	MPMX19_05425	0.18	+1.4
115,913	+	MPMX19_05425	0.18	-0.9
115,913	+	MPMX19_05425	0.18	-0.9
115,913	+	MPMX19_05425	0.18	-0.2
115,913	+	MPMX19_05425	0.18	-1.0
115,914	-	MPMX19_05425	0.18	-1.5
115,914	-	MPMX19_05425	0.18	+0.5
115,914	-	MPMX19_05425	0.18	-0.5
115,914	-	MPMX19_05425	0.18	-0.5
115,914	-	MPMX19_05425	0.18	-0.1
115,914	-	MPMX19_05425	0.18	-1.7
115,914	-	MPMX19_05425	0.18	-0.6
115,914	-	MPMX19_05425	0.18	-0.1
115,914	-	MPMX19_05425	0.18	-0.0
115,916	+	MPMX19_05425	0.19	-1.1
115,916	+	MPMX19_05425	0.19	-0.2
115,916	+	MPMX19_05425	0.19	-1.2
115,916	+	MPMX19_05425	0.19	-1.2
115,917	-	MPMX19_05425	0.19	+0.3
115,917	-	MPMX19_05425	0.19	-1.3
115,925	+	MPMX19_05425	0.19	+0.9
115,925	+	MPMX19_05425	0.19	-1.6
115,925	+	MPMX19_05425	0.19	+1.7
115,925	+	MPMX19_05425	0.19	+0.1
115,925	+	MPMX19_05425	0.19	-0.9
115,925	+	MPMX19_05425	0.19	-2.3
115,925	+	MPMX19_05425	0.19	-0.3
115,926	-	MPMX19_05425	0.19	-0.8
115,926	-	MPMX19_05425	0.19	-0.7
115,926	-	MPMX19_05425	0.19	-0.4
115,926	-	MPMX19_05425	0.19	-0.1
115,926	-	MPMX19_05425	0.19	-0.1
115,926	-	MPMX19_05425	0.19	-1.8
115,926	-	MPMX19_05425	0.19	-1.3
116,276	+	MPMX19_05425	0.44	-0.4
116,276	+	MPMX19_05425	0.44	+0.2
116,277	-	MPMX19_05425	0.44	-0.2
116,277	-	MPMX19_05425	0.44	-1.5
116,277	-	MPMX19_05425	0.44	-0.3
116,277	-	MPMX19_05425	0.44	-0.4
116,277	-	MPMX19_05425	0.44	-0.5
116,420	+	MPMX19_05425	0.55	+1.1
116,420	+	MPMX19_05425	0.55	+0.5
116,420	+	MPMX19_05425	0.55	-1.0
116,420	+	MPMX19_05425	0.55	-1.2
116,420	+	MPMX19_05425	0.55	-0.3
116,420	+	MPMX19_05425	0.55	-0.4
116,420	+	MPMX19_05425	0.55	-0.9
116,420	+	MPMX19_05425	0.55	+1.1
116,420	+	MPMX19_05425	0.55	-1.0
116,420	+	MPMX19_05425	0.55	-1.2
116,420	+	MPMX19_05425	0.55	-0.9
116,420	+	MPMX19_05425	0.55	-0.3
116,421	-	MPMX19_05425	0.55	+0.3
116,421	-	MPMX19_05425	0.55	-1.2
116,421	-	MPMX19_05425	0.55	-1.1
116,421	-	MPMX19_05425	0.55	-0.4
116,421	-	MPMX19_05425	0.55	-0.2
116,421	-	MPMX19_05425	0.55	-0.2
116,421	-	MPMX19_05425	0.55	-2.0
116,421	-	MPMX19_05425	0.55	-0.6
116,421	-	MPMX19_05425	0.55	-1.1
116,421	-	MPMX19_05425	0.55	-0.9
116,421	-	MPMX19_05425	0.55	+0.0
116,421	-	MPMX19_05425	0.55	-0.9
116,421	-	MPMX19_05425	0.55	-1.1
116,421	-	MPMX19_05425	0.55	+0.9
116,600	+	MPMX19_05425	0.67	-0.3
116,600	+	MPMX19_05425	0.67	+0.8
116,600	+	MPMX19_05425	0.67	+0.5
116,601	-	MPMX19_05425	0.68	-0.5
116,601	-	MPMX19_05425	0.68	-1.6
116,601	-	MPMX19_05425	0.68	+0.9
116,601	-	MPMX19_05425	0.68	-0.1
116,602	+	MPMX19_05425	0.68	-1.2
116,603	-	MPMX19_05425	0.68	+0.2
116,603	-	MPMX19_05425	0.68	-0.5
117,021	+			+0.9
117,022	-			-0.5
117,022	-			+0.0
117,022	-			+1.0
117,070	+			-1.3
117,070	+			-1.2
117,070	+			+0.0
117,070	+			-0.5
117,070	+			-0.5
117,070	+			-0.7
117,070	+			-0.5
117,071	-			+0.9
117,071	-			-1.5
117,071	-			-0.1
117,071	-			-0.6
117,071	-			-0.3
117,228	+			-1.5
117,228	+			-2.9
117,229	-			-0.9
117,273	+	MPMX19_05426	0.11	+0.1
117,273	+	MPMX19_05426	0.11	-0.4
117,273	+	MPMX19_05426	0.11	+0.2
117,274	-	MPMX19_05426	0.11	-0.3
117,274	-	MPMX19_05426	0.11	-0.2
117,274	-	MPMX19_05426	0.11	-1.3
117,696	+	MPMX19_05426	0.49	-0.5
117,696	+	MPMX19_05426	0.49	-0.3
117,696	+	MPMX19_05426	0.49	+0.8
117,696	+	MPMX19_05426	0.49	-2.4
117,696	+	MPMX19_05426	0.49	-0.6
117,696	+	MPMX19_05426	0.49	-1.8
117,696	+	MPMX19_05426	0.49	-0.7
117,697	-	MPMX19_05426	0.49	-0.4
117,697	-	MPMX19_05426	0.49	-0.4
117,697	-	MPMX19_05426	0.49	-1.5
117,697	-	MPMX19_05426	0.49	+0.7
117,747	+	MPMX19_05426	0.53	+0.1
117,748	-	MPMX19_05426	0.54	+1.1
117,858	+	MPMX19_05426	0.63	-1.0
117,858	+	MPMX19_05426	0.63	-1.2
117,859	-	MPMX19_05426	0.64	-3.0
117,859	-	MPMX19_05426	0.64	-0.9
117,859	-	MPMX19_05426	0.64	-2.8

Or see this region's nucleotide sequence