Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04189 and MPMX19_04190 are separated by 3 nucleotides MPMX19_04190 and MPMX19_04191 are separated by 422 nucleotides
MPMX19_04189: MPMX19_04189 - hypothetical protein, at 519,960 to 522,302
_04189
MPMX19_04190: MPMX19_04190 - N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase, at 522,306 to 523,130
_04190
MPMX19_04191: MPMX19_04191 - hypothetical protein, at 523,553 to 525,835
_04191
Position (kb) 522
523
524 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.566 kb on + strand, within MPMX19_04189 at 521.567 kb on - strand, within MPMX19_04189 at 521.567 kb on - strand, within MPMX19_04189 at 521.623 kb on + strand, within MPMX19_04189 at 521.624 kb on - strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.884 kb on + strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 521.885 kb on - strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.067 kb on + strand, within MPMX19_04189 at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.068 kb on - strand at 522.457 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.700 kb on + strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.701 kb on - strand, within MPMX19_04190 at 522.739 kb on + strand, within MPMX19_04190 at 522.739 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.805 kb on + strand, within MPMX19_04190 at 522.806 kb on - strand, within MPMX19_04190 at 522.806 kb on - strand, within MPMX19_04190 at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.280 kb on + strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.281 kb on - strand at 523.345 kb on - strand at 523.345 kb on - strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.402 kb on + strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.403 kb on - strand at 523.422 kb on - strand at 523.422 kb on - strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.442 kb on + strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.443 kb on - strand at 523.500 kb on + strand at 523.501 kb on - strand at 523.591 kb on + strand at 523.592 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 521,566 + MPMX19_04189 0.69 +0.6 521,566 + MPMX19_04189 0.69 +0.3 521,566 + MPMX19_04189 0.69 +1.6 521,566 + MPMX19_04189 0.69 +0.4 521,567 - MPMX19_04189 0.69 -0.2 521,567 - MPMX19_04189 0.69 -0.0 521,623 + MPMX19_04189 0.71 +1.2 521,624 - MPMX19_04189 0.71 -0.4 521,884 + MPMX19_04189 0.82 -0.7 521,884 + MPMX19_04189 0.82 +0.8 521,884 + MPMX19_04189 0.82 -0.9 521,884 + MPMX19_04189 0.82 +1.4 521,884 + MPMX19_04189 0.82 -0.3 521,884 + MPMX19_04189 0.82 -0.3 521,884 + MPMX19_04189 0.82 -0.1 521,884 + MPMX19_04189 0.82 -1.6 521,884 + MPMX19_04189 0.82 -0.3 521,884 + MPMX19_04189 0.82 -1.7 521,884 + MPMX19_04189 0.82 +0.1 521,884 + MPMX19_04189 0.82 -1.0 521,884 + MPMX19_04189 0.82 -0.5 521,884 + MPMX19_04189 0.82 -0.2 521,884 + MPMX19_04189 0.82 -1.3 521,884 + MPMX19_04189 0.82 -0.3 521,885 - MPMX19_04189 0.82 -0.2 521,885 - MPMX19_04189 0.82 +0.0 521,885 - MPMX19_04189 0.82 -0.2 521,885 - MPMX19_04189 0.82 -0.0 521,885 - MPMX19_04189 0.82 +0.7 521,885 - MPMX19_04189 0.82 -0.3 521,885 - MPMX19_04189 0.82 +1.4 522,067 + MPMX19_04189 0.90 -0.6 522,067 + MPMX19_04189 0.90 -3.0 522,067 + MPMX19_04189 0.90 +1.3 522,067 + MPMX19_04189 0.90 -1.0 522,067 + MPMX19_04189 0.90 +0.6 522,067 + MPMX19_04189 0.90 -0.5 522,067 + MPMX19_04189 0.90 +1.4 522,067 + MPMX19_04189 0.90 +0.5 522,067 + MPMX19_04189 0.90 -2.4 522,067 + MPMX19_04189 0.90 -3.1 522,067 + MPMX19_04189 0.90 -2.4 522,067 + MPMX19_04189 0.90 -0.4 522,067 + MPMX19_04189 0.90 +0.3 522,067 + MPMX19_04189 0.90 +0.3 522,067 + MPMX19_04189 0.90 +1.7 522,067 + MPMX19_04189 0.90 +0.2 522,067 + MPMX19_04189 0.90 -0.4 522,067 + MPMX19_04189 0.90 -0.3 522,067 + MPMX19_04189 0.90 -0.8 522,067 + MPMX19_04189 0.90 +0.2 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 -2.0 522,067 + MPMX19_04189 0.90 -1.0 522,067 + MPMX19_04189 0.90 -0.8 522,067 + MPMX19_04189 0.90 -1.2 522,067 + MPMX19_04189 0.90 -1.8 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 -1.8 522,067 + MPMX19_04189 0.90 -0.5 522,067 + MPMX19_04189 0.90 -1.0 522,067 + MPMX19_04189 0.90 -0.9 522,067 + MPMX19_04189 0.90 -0.1 522,067 + MPMX19_04189 0.90 -0.2 522,067 + MPMX19_04189 0.90 -0.3 522,068 - +0.8 522,068 - +0.5 522,068 - +0.3 522,068 - -0.2 522,068 - -1.7 522,068 - -0.2 522,068 - +0.2 522,068 - -0.3 522,068 - +0.0 522,068 - -1.0 522,068 - -0.8 522,068 - -1.2 522,068 - -0.9 522,068 - -0.7 522,068 - -0.4 522,068 - -0.8 522,068 - -0.4 522,068 - +2.5 522,068 - +1.9 522,068 - -0.1 522,068 - -0.9 522,068 - -1.3 522,068 - -0.6 522,068 - -1.5 522,068 - -0.5 522,068 - -1.0 522,068 - -1.8 522,068 - +0.2 522,068 - -2.6 522,068 - -0.2 522,068 - -0.2 522,457 + MPMX19_04190 0.18 +0.8 522,700 + MPMX19_04190 0.48 -0.5 522,700 + MPMX19_04190 0.48 -0.8 522,700 + MPMX19_04190 0.48 -1.5 522,700 + MPMX19_04190 0.48 -0.3 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 +0.6 522,700 + MPMX19_04190 0.48 -0.6 522,700 + MPMX19_04190 0.48 -1.5 522,700 + MPMX19_04190 0.48 -1.0 522,700 + MPMX19_04190 0.48 -1.2 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 -1.5 522,700 + MPMX19_04190 0.48 +0.4 522,700 + MPMX19_04190 0.48 +0.4 522,700 + MPMX19_04190 0.48 -0.8 522,700 + MPMX19_04190 0.48 -0.1 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 +1.3 522,700 + MPMX19_04190 0.48 +0.3 522,700 + MPMX19_04190 0.48 +0.6 522,700 + MPMX19_04190 0.48 +0.4 522,700 + MPMX19_04190 0.48 -0.9 522,700 + MPMX19_04190 0.48 -0.9 522,700 + MPMX19_04190 0.48 +1.4 522,700 + MPMX19_04190 0.48 -1.4 522,700 + MPMX19_04190 0.48 +1.9 522,700 + MPMX19_04190 0.48 -1.4 522,700 + MPMX19_04190 0.48 +1.7 522,700 + MPMX19_04190 0.48 +0.7 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 -0.2 522,700 + MPMX19_04190 0.48 -0.0 522,700 + MPMX19_04190 0.48 -0.9 522,700 + MPMX19_04190 0.48 +1.9 522,700 + MPMX19_04190 0.48 -1.2 522,700 + MPMX19_04190 0.48 -2.2 522,700 + MPMX19_04190 0.48 -1.4 522,700 + MPMX19_04190 0.48 +0.2 522,700 + MPMX19_04190 0.48 -1.4 522,700 + MPMX19_04190 0.48 -1.3 522,700 + MPMX19_04190 0.48 -0.3 522,701 - MPMX19_04190 0.48 -0.4 522,701 - MPMX19_04190 0.48 -1.3 522,701 - MPMX19_04190 0.48 +0.2 522,701 - MPMX19_04190 0.48 +0.2 522,701 - MPMX19_04190 0.48 -1.5 522,701 - MPMX19_04190 0.48 -0.9 522,701 - MPMX19_04190 0.48 -1.0 522,701 - MPMX19_04190 0.48 +0.4 522,701 - MPMX19_04190 0.48 -1.3 522,701 - MPMX19_04190 0.48 +0.7 522,701 - MPMX19_04190 0.48 -1.7 522,701 - MPMX19_04190 0.48 -1.0 522,701 - MPMX19_04190 0.48 -0.4 522,701 - MPMX19_04190 0.48 -0.4 522,701 - MPMX19_04190 0.48 -2.7 522,701 - MPMX19_04190 0.48 -1.2 522,701 - MPMX19_04190 0.48 -0.6 522,701 - MPMX19_04190 0.48 -1.1 522,701 - MPMX19_04190 0.48 +2.2 522,701 - MPMX19_04190 0.48 -0.0 522,701 - MPMX19_04190 0.48 +0.6 522,701 - MPMX19_04190 0.48 +0.4 522,701 - MPMX19_04190 0.48 -0.3 522,701 - MPMX19_04190 0.48 +1.9 522,701 - MPMX19_04190 0.48 -1.6 522,701 - MPMX19_04190 0.48 +0.6 522,701 - MPMX19_04190 0.48 -0.1 522,701 - MPMX19_04190 0.48 +0.7 522,701 - MPMX19_04190 0.48 +0.2 522,701 - MPMX19_04190 0.48 -1.2 522,701 - MPMX19_04190 0.48 +1.4 522,739 + MPMX19_04190 0.52 +0.6 522,739 + MPMX19_04190 0.52 -0.5 522,805 + MPMX19_04190 0.60 -1.5 522,805 + MPMX19_04190 0.60 +0.7 522,805 + MPMX19_04190 0.60 -0.7 522,805 + MPMX19_04190 0.60 -1.0 522,805 + MPMX19_04190 0.60 +0.2 522,806 - MPMX19_04190 0.61 -0.7 522,806 - MPMX19_04190 0.61 -0.6 523,280 + +0.5 523,280 + +0.4 523,280 + +1.6 523,280 + -0.4 523,280 + -0.7 523,280 + -1.6 523,280 + -0.0 523,280 + -0.8 523,280 + +1.2 523,280 + -0.4 523,280 + +1.7 523,280 + +1.2 523,280 + -0.6 523,280 + +2.2 523,280 + -0.6 523,280 + -0.4 523,280 + -0.3 523,280 + -0.8 523,280 + -0.9 523,280 + -1.2 523,281 - -1.5 523,281 - +0.5 523,281 - -0.3 523,281 - -0.2 523,281 - +1.3 523,281 - -1.0 523,281 - -0.0 523,281 - -0.6 523,281 - +0.4 523,281 - -1.6 523,281 - -1.0 523,281 - -0.3 523,281 - +0.4 523,281 - -2.8 523,281 - -1.0 523,281 - -2.8 523,281 - -0.0 523,281 - -0.4 523,281 - +0.3 523,281 - -0.2 523,281 - -1.2 523,281 - +1.3 523,281 - +0.4 523,281 - -1.8 523,345 - -0.8 523,345 - -0.2 523,402 + -0.4 523,402 + +0.8 523,402 + -1.3 523,402 + -1.1 523,402 + -0.0 523,403 - -1.0 523,403 - +0.4 523,403 - -0.1 523,403 - -1.0 523,422 - +0.6 523,422 - -0.5 523,442 + +0.5 523,442 + -0.4 523,442 + -1.5 523,442 + -1.2 523,442 + -0.4 523,442 + +0.4 523,442 + +0.5 523,442 + -1.0 523,442 + -1.2 523,442 + +0.8 523,443 - -1.5 523,443 - -0.6 523,443 - -1.3 523,443 - +0.8 523,443 - +1.0 523,500 + +0.2 523,501 - +1.2 523,591 + -0.8 523,592 - -0.4
Or see this region's nucleotide sequence