Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02569 and MPMX19_02570 overlap by 4 nucleotides MPMX19_02570 and MPMX19_02571 are separated by 62 nucleotides MPMX19_02571 and MPMX19_02572 overlap by 4 nucleotides
MPMX19_02569: MPMX19_02569 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 2,684,374 to 2,686,197
_02569
MPMX19_02570: MPMX19_02570 - Ribosomal RNA small subunit methyltransferase G, at 2,686,194 to 2,686,808
_02570
MPMX19_02571: MPMX19_02571 - Chromosome partitioning protein ParA, at 2,686,871 to 2,687,668
_02571
MPMX19_02572: MPMX19_02572 - Chromosome-partitioning protein ParB, at 2,687,665 to 2,688,576
_02572
Position (kb)
2686
2687 Strain fitness (log2 ratio)
-2
-1
0
1 at 2685.925 kb on + strand, within MPMX19_02569 at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.154 kb on + strand at 2686.269 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2686.722 kb on + strand, within MPMX19_02570 at 2687.072 kb on + strand, within MPMX19_02571 at 2687.073 kb on - strand, within MPMX19_02571 at 2687.073 kb on - strand, within MPMX19_02571 at 2687.252 kb on + strand, within MPMX19_02571 at 2687.252 kb on + strand, within MPMX19_02571 at 2687.348 kb on + strand, within MPMX19_02571 at 2687.516 kb on + strand, within MPMX19_02571 at 2687.615 kb on + strand at 2687.616 kb on - strand at 2687.752 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 2,685,925 + MPMX19_02569 0.85 -0.3 2,686,154 + -1.0 2,686,154 + -0.3 2,686,154 + +0.1 2,686,154 + -0.9 2,686,154 + +1.3 2,686,154 + +0.0 2,686,154 + -0.4 2,686,154 + +0.7 2,686,154 + +0.3 2,686,154 + -0.8 2,686,154 + -1.1 2,686,154 + -0.2 2,686,154 + +0.4 2,686,154 + +0.3 2,686,154 + -1.3 2,686,154 + -0.2 2,686,154 + -0.7 2,686,154 + -0.9 2,686,154 + +0.7 2,686,154 + -2.1 2,686,154 + -0.6 2,686,154 + -0.4 2,686,269 + MPMX19_02570 0.12 -1.2 2,686,722 + MPMX19_02570 0.86 -0.1 2,686,722 + MPMX19_02570 0.86 -0.3 2,686,722 + MPMX19_02570 0.86 +0.7 2,687,072 + MPMX19_02571 0.25 -0.1 2,687,073 - MPMX19_02571 0.25 -0.7 2,687,073 - MPMX19_02571 0.25 +0.3 2,687,252 + MPMX19_02571 0.48 -0.1 2,687,252 + MPMX19_02571 0.48 +0.3 2,687,348 + MPMX19_02571 0.60 -1.1 2,687,516 + MPMX19_02571 0.81 +0.3 2,687,615 + -1.1 2,687,616 - -0.1 2,687,752 + -0.3
Or see this region's nucleotide sequence