Experiment: NL-CCM, start OD=0.3
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02444 and MPMX19_02445 are separated by 26 nucleotides MPMX19_02445 and MPMX19_02446 are separated by 282 nucleotides MPMX19_02446 and MPMX19_02447 are separated by 4 nucleotides
MPMX19_02444: MPMX19_02444 - hypothetical protein, at 2,565,353 to 2,566,117
_02444
MPMX19_02445: MPMX19_02445 - hypothetical protein, at 2,566,144 to 2,566,584
_02445
MPMX19_02446: MPMX19_02446 - Release factor glutamine methyltransferase, at 2,566,867 to 2,567,715
_02446
MPMX19_02447: MPMX19_02447 - Peptide chain release factor RF1, at 2,567,720 to 2,568,805
_02447
Position (kb)
2566
2567
2568 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2566.031 kb on + strand, within MPMX19_02444 at 2566.031 kb on + strand, within MPMX19_02444 at 2566.032 kb on - strand, within MPMX19_02444 at 2566.115 kb on + strand at 2566.115 kb on + strand at 2566.115 kb on + strand at 2566.116 kb on - strand at 2566.116 kb on - strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.131 kb on + strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.132 kb on - strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.142 kb on + strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.143 kb on - strand at 2566.818 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.3 remove 2,566,031 + MPMX19_02444 0.89 -2.1 2,566,031 + MPMX19_02444 0.89 +0.4 2,566,032 - MPMX19_02444 0.89 +0.6 2,566,115 + +0.6 2,566,115 + -0.9 2,566,115 + +0.6 2,566,116 - -1.4 2,566,116 - -1.1 2,566,131 + -0.6 2,566,131 + -0.1 2,566,131 + -1.0 2,566,131 + -0.6 2,566,132 - -0.4 2,566,132 - -0.7 2,566,132 - -0.8 2,566,132 - +0.1 2,566,132 - -1.1 2,566,132 - -0.6 2,566,132 - +0.8 2,566,132 - +0.1 2,566,132 - +0.5 2,566,132 - +0.1 2,566,132 - -0.5 2,566,132 - -1.1 2,566,142 + -1.9 2,566,142 + +0.9 2,566,142 + -1.0 2,566,142 + -1.6 2,566,142 + -0.2 2,566,142 + -1.5 2,566,142 + -0.6 2,566,142 + -0.4 2,566,142 + -0.6 2,566,142 + -0.3 2,566,142 + -1.5 2,566,142 + -1.9 2,566,142 + -2.3 2,566,142 + -0.1 2,566,142 + -1.2 2,566,142 + +1.9 2,566,142 + -2.2 2,566,142 + -0.4 2,566,143 - -0.9 2,566,143 - -1.2 2,566,143 - -1.4 2,566,143 - -0.3 2,566,143 - +0.1 2,566,143 - +0.3 2,566,143 - -0.4 2,566,143 - -0.2 2,566,143 - -1.8 2,566,143 - -0.4 2,566,143 - -1.1 2,566,143 - -0.1 2,566,818 - +0.1
Or see this region's nucleotide sequence