Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01982

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
2,063,918	+		MPMX19_01981	0.28	-2.1
2,063,918	+		MPMX19_01981	0.28	-1.9
2,063,918	+		MPMX19_01981	0.28	-1.2
2,063,918	+		MPMX19_01981	0.28	-0.2
2,063,919	-		MPMX19_01981	0.28	-0.9
2,063,919	-		MPMX19_01981	0.28	-1.2
2,063,919	-		MPMX19_01981	0.28	-2.6
2,063,919	-		MPMX19_01981	0.28	-1.7
2,063,919	-		MPMX19_01981	0.28	-0.7
2,063,919	-		MPMX19_01981	0.28	+0.1
2,063,919	-		MPMX19_01981	0.28	-1.2
2,063,919	-		MPMX19_01981	0.28	-1.0
2,063,919	-		MPMX19_01981	0.28	-0.4
2,063,919	-		MPMX19_01981	0.28	-1.1
2,063,970	+		MPMX19_01981	0.33	-0.8
2,063,970	+		MPMX19_01981	0.33	+0.1
2,063,970	+		MPMX19_01981	0.33	+0.4
2,064,107	+		MPMX19_01981	0.45	+0.1
2,064,107	+		MPMX19_01981	0.45	+0.1
2,064,107	+		MPMX19_01981	0.45	-0.5
2,064,107	+		MPMX19_01981	0.45	+0.1
2,064,107	+		MPMX19_01981	0.45	-1.2
2,064,108	-		MPMX19_01981	0.45	+0.1
2,064,108	-		MPMX19_01981	0.45	-0.4
2,064,108	-		MPMX19_01981	0.45	+0.5
2,064,108	-		MPMX19_01981	0.45	+0.7
2,064,108	-		MPMX19_01981	0.45	-0.2
2,064,108	-		MPMX19_01981	0.45	+0.5
2,064,108	-		MPMX19_01981	0.45	-1.1
2,064,158	+		MPMX19_01981	0.50	+0.7
2,064,158	+		MPMX19_01981	0.50	-0.2
2,064,158	+		MPMX19_01981	0.50	-0.2
2,064,158	+		MPMX19_01981	0.50	+0.8
2,064,159	-		MPMX19_01981	0.50	-1.5
2,064,159	-		MPMX19_01981	0.50	+0.3
2,064,159	-		MPMX19_01981	0.50	-1.0
2,064,227	+		MPMX19_01981	0.56	+0.3
2,064,227	+		MPMX19_01981	0.56	-1.6
2,064,228	-		MPMX19_01981	0.56	+0.2
2,064,491	+		MPMX19_01981	0.80	-0.9
2,064,491	+		MPMX19_01981	0.80	-1.5
2,064,491	+		MPMX19_01981	0.80	-1.7
2,064,491	+		MPMX19_01981	0.80	-0.2
2,064,491	+		MPMX19_01981	0.80	-2.3
2,064,491	+		MPMX19_01981	0.80	-1.5
2,064,491	+		MPMX19_01981	0.80	+0.8
2,064,491	+		MPMX19_01981	0.80	-0.4
2,064,491	+		MPMX19_01981	0.80	+0.5
2,064,491	+		MPMX19_01981	0.80	-0.2
2,064,491	+		MPMX19_01981	0.80	+0.4
2,064,491	+		MPMX19_01981	0.80	-0.4
2,064,491	+		MPMX19_01981	0.80	-0.8
2,064,491	+		MPMX19_01981	0.80	-1.9
2,064,491	+		MPMX19_01981	0.80	+0.1
2,064,491	+		MPMX19_01981	0.80	+1.1
2,064,491	+		MPMX19_01981	0.80	-2.9
2,064,491	+		MPMX19_01981	0.80	+0.2
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,492	-		MPMX19_01981	0.80	+0.9
2,064,492	-		MPMX19_01981	0.80	-1.5
2,064,492	-		MPMX19_01981	0.80	+1.8
2,064,492	-		MPMX19_01981	0.80	-0.7
2,064,492	-		MPMX19_01981	0.80	-0.7
2,064,492	-		MPMX19_01981	0.80	-1.5
2,064,492	-		MPMX19_01981	0.80	-0.9
2,064,492	-		MPMX19_01981	0.80	+0.5
2,064,492	-		MPMX19_01981	0.80	-1.4
2,064,492	-		MPMX19_01981	0.80	+1.3
2,064,492	-		MPMX19_01981	0.80	-0.9
2,064,492	-		MPMX19_01981	0.80	-0.7
2,064,492	-		MPMX19_01981	0.80	-0.2
2,064,492	-		MPMX19_01981	0.80	-0.9
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,492	-		MPMX19_01981	0.80	-1.2
2,064,492	-		MPMX19_01981	0.80	-1.4
2,064,492	-		MPMX19_01981	0.80	-1.5
2,064,492	-		MPMX19_01981	0.80	-0.5
2,064,492	-		MPMX19_01981	0.80	+1.1
2,064,492	-		MPMX19_01981	0.80	+0.8
2,064,492	-		MPMX19_01981	0.80	-0.4
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,492	-		MPMX19_01981	0.80	-0.8
2,064,497	+		MPMX19_01981	0.80	-1.0
2,064,497	+		MPMX19_01981	0.80	+0.6
2,064,497	+		MPMX19_01981	0.80	-1.2
2,064,497	+		MPMX19_01981	0.80	-1.5
2,064,497	+		MPMX19_01981	0.80	-1.8
2,064,497	+		MPMX19_01981	0.80	-0.8
2,064,497	+		MPMX19_01981	0.80	-0.7
2,064,498	-		MPMX19_01981	0.80	-1.4
2,064,498	-		MPMX19_01981	0.80	+1.2
2,064,498	-		MPMX19_01981	0.80	-0.9
2,064,498	-		MPMX19_01981	0.80	+0.4
2,064,498	-		MPMX19_01981	0.80	-1.2
2,064,566	+		MPMX19_01981	0.87	+0.6
2,064,566	+		MPMX19_01981	0.87	+1.1
2,064,566	+		MPMX19_01981	0.87	-1.6
2,064,566	+		MPMX19_01981	0.87	-1.5
2,064,566	+		MPMX19_01981	0.87	-0.5
2,064,566	+		MPMX19_01981	0.87	-0.8
2,064,566	+		MPMX19_01981	0.87	-0.5
2,064,567	-		MPMX19_01981	0.87	-0.1
2,064,567	-		MPMX19_01981	0.87	-1.5
2,064,567	-		MPMX19_01981	0.87	+0.1
2,064,567	-		MPMX19_01981	0.87	-0.3
2,064,567	-		MPMX19_01981	0.87	+0.7
2,064,567	-		MPMX19_01981	0.87	+0.2
2,064,569	+		MPMX19_01981	0.87	+1.8
2,064,569	+		MPMX19_01981	0.87	-0.2
2,064,569	+		MPMX19_01981	0.87	-0.7
2,064,569	+		MPMX19_01981	0.87	-0.9
2,064,569	+		MPMX19_01981	0.87	+0.5
2,064,569	+		MPMX19_01981	0.87	-1.4
2,064,569	+		MPMX19_01981	0.87	+0.2
2,064,570	-		MPMX19_01981	0.87	-0.7
2,064,570	-		MPMX19_01981	0.87	-0.9
2,064,570	-		MPMX19_01981	0.87	-1.3
2,064,659	+				-0.4
2,064,659	+				+0.3
2,064,660	-				-1.4
2,064,660	-				-2.1
2,064,660	-				-0.9
2,064,730	+				-0.7
2,064,730	+				-0.4
2,064,730	+				-0.2
2,064,730	+				-0.0
2,064,730	+				-1.8
2,064,730	+				-0.7
2,064,730	+				+0.9
2,064,730	+				+1.5
2,064,730	+				-1.0
2,064,730	+				+0.4
2,064,730	+				+0.0
2,064,730	+				-0.6
2,064,730	+				+0.1
2,064,731	-				-1.7
2,064,731	-				-1.4
2,064,731	-				-0.4
2,064,731	-				+0.1
2,064,731	-				-1.2
2,064,731	-				-0.7
2,064,731	-				-0.9
2,064,731	-				+0.3
2,064,731	-				-1.1
2,064,731	-				-1.1
2,064,731	-				-0.2
2,064,731	-				+0.6
2,064,872	+				-0.4
2,064,873	-				-1.4
2,065,344	+		MPMX19_01982	0.55	-0.9
2,065,344	+		MPMX19_01982	0.55	+0.3
2,065,344	+		MPMX19_01982	0.55	-1.4
2,065,344	+		MPMX19_01982	0.55	-1.2
2,065,344	+		MPMX19_01982	0.55	+2.1
2,065,344	+		MPMX19_01982	0.55	-1.9
2,065,344	+		MPMX19_01982	0.55	+0.1
2,065,344	+		MPMX19_01982	0.55	+0.8
2,065,344	+		MPMX19_01982	0.55	-0.9
2,065,344	+		MPMX19_01982	0.55	-0.8
2,065,344	+		MPMX19_01982	0.55	-0.5
2,065,344	+		MPMX19_01982	0.55	-1.1
2,065,344	+		MPMX19_01982	0.55	-0.3
2,065,344	+		MPMX19_01982	0.55	-1.0
2,065,344	+		MPMX19_01982	0.55	-0.0
2,065,344	+		MPMX19_01982	0.55	-2.8
2,065,344	+		MPMX19_01982	0.55	-0.5
2,065,344	+		MPMX19_01982	0.55	-1.6
2,065,344	+		MPMX19_01982	0.55	+0.7
2,065,344	+		MPMX19_01982	0.55	-1.1
2,065,344	+		MPMX19_01982	0.55	-2.1
2,065,344	+		MPMX19_01982	0.55	+0.1
2,065,344	+		MPMX19_01982	0.55	-1.1
2,065,344	+		MPMX19_01982	0.55	-1.0
2,065,345	-		MPMX19_01982	0.56	-0.9
2,065,345	-		MPMX19_01982	0.56	-0.2
2,065,345	-		MPMX19_01982	0.56	+0.3
2,065,345	-		MPMX19_01982	0.56	-1.2
2,065,345	-		MPMX19_01982	0.56	+0.1
2,065,345	-		MPMX19_01982	0.56	+1.3
2,065,345	-		MPMX19_01982	0.56	-0.5
2,065,345	-		MPMX19_01982	0.56	-0.0
2,065,482	+		MPMX19_01982	0.73	+1.0
2,065,482	+		MPMX19_01982	0.73	+0.6
2,065,482	+		MPMX19_01982	0.73	-1.1
2,065,482	+		MPMX19_01982	0.73	-1.0
2,065,482	+		MPMX19_01982	0.73	-1.7
2,065,482	+		MPMX19_01982	0.73	-1.5
2,065,482	+		MPMX19_01982	0.73	-0.8
2,065,483	-		MPMX19_01982	0.73	+0.1
2,065,483	-		MPMX19_01982	0.73	-0.5
2,065,483	-		MPMX19_01982	0.73	-0.9
2,065,563	+		MPMX19_01982	0.83	+0.2
2,065,563	+		MPMX19_01982	0.83	+1.1
2,065,564	-		MPMX19_01982	0.84	-1.7
2,065,614	+				+0.7
2,065,615	-				-1.4
2,065,615	-				-0.2
2,065,615	-				-1.4
2,065,615	-				-1.4
2,065,615	-				+0.8
2,065,615	-				-1.8
2,065,689	+				-1.2
2,065,690	-				+0.1
2,065,690	-				-0.0
2,065,690	-				+1.1
2,065,690	-				-1.4
2,065,690	-				-0.4
2,066,528	+		MPMX19_01983	0.86	-0.7
2,066,528	+		MPMX19_01983	0.86	+0.7
2,066,528	+		MPMX19_01983	0.86	-1.4
2,066,528	+		MPMX19_01983	0.86	+0.8
2,066,528	+		MPMX19_01983	0.86	-1.0
2,066,528	+		MPMX19_01983	0.86	-0.8
2,066,528	+		MPMX19_01983	0.86	+0.4
2,066,528	+		MPMX19_01983	0.86	-1.1
2,066,528	+		MPMX19_01983	0.86	-0.2
2,066,528	+		MPMX19_01983	0.86	+0.3
2,066,528	+		MPMX19_01983	0.86	+0.3
2,066,528	+		MPMX19_01983	0.86	-0.2
2,066,528	+		MPMX19_01983	0.86	-1.0
2,066,528	+		MPMX19_01983	0.86	-0.7
2,066,529	-		MPMX19_01983	0.86	+0.5
2,066,529	-		MPMX19_01983	0.86	+1.3
2,066,529	-		MPMX19_01983	0.86	-0.6
2,066,529	-		MPMX19_01983	0.86	-0.9
2,066,529	-		MPMX19_01983	0.86	-1.7
2,066,529	-		MPMX19_01983	0.86	-1.6
2,066,529	-		MPMX19_01983	0.86	-0.1
2,066,529	-		MPMX19_01983	0.86	-0.4
2,066,529	-		MPMX19_01983	0.86	-0.2