Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01045

Experiment: NL-CCM, start OD=0.3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.3
1,084,009	+		MPMX19_01043	0.50	-0.5
1,084,009	+		MPMX19_01043	0.50	+2.4
1,084,166	+		MPMX19_01043	0.74	-0.5
1,084,166	+		MPMX19_01043	0.74	-0.8
1,084,166	+		MPMX19_01043	0.74	-1.0
1,084,166	+		MPMX19_01043	0.74	-0.9
1,084,166	+		MPMX19_01043	0.74	-0.7
1,084,166	+		MPMX19_01043	0.74	+1.1
1,084,167	-		MPMX19_01043	0.74	-0.8
1,084,167	-		MPMX19_01043	0.74	-1.6
1,084,167	-		MPMX19_01043	0.74	-0.3
1,084,167	-		MPMX19_01043	0.74	-0.6
1,084,167	-		MPMX19_01043	0.74	-1.0
1,084,269	+		MPMX19_01043	0.90	+0.2
1,084,269	+		MPMX19_01043	0.90	-0.8
1,084,269	+		MPMX19_01043	0.90	-1.0
1,084,270	-				-0.8
1,084,409	+				-0.6
1,084,409	+				+1.0
1,084,409	+				-1.6
1,084,409	+				-0.6
1,084,410	-				+0.4
1,084,410	-				-0.0
1,084,410	-				+1.2
1,084,410	-				-0.2
1,084,410	-				-0.2
1,084,514	+				-0.4
1,084,555	+				-0.6
1,084,556	-				-0.6
1,084,559	+				-0.0
1,084,559	+				-1.9
1,084,559	+				-0.5
1,084,560	-				-0.6
1,084,560	-				-0.6
1,084,577	+				+0.4
1,084,577	+				-0.2
1,084,577	+				-2.3
1,084,613	-				+1.6
1,084,639	-				-1.3
1,084,665	+				+0.3
1,084,665	+				-1.3
1,084,670	+				-0.5
1,084,670	+				-1.0
1,084,670	+				-0.6
1,084,670	+				-0.2
1,084,670	+				-1.0
1,084,670	+				+0.4
1,084,671	-				-2.3
1,084,671	-				-0.4
1,084,671	-				-0.3
1,084,679	+				-0.3
1,084,691	-				-0.6
1,084,753	+		MPMX19_01044	0.15	-0.8
1,084,753	+		MPMX19_01044	0.15	-0.2
1,084,753	+		MPMX19_01044	0.15	+0.2
1,084,754	-		MPMX19_01044	0.16	-1.2
1,084,761	+		MPMX19_01044	0.20	-0.8
1,084,762	-		MPMX19_01044	0.20	+0.4
1,084,762	-		MPMX19_01044	0.20	+0.1
1,084,786	+		MPMX19_01044	0.35	+0.4
1,084,786	+		MPMX19_01044	0.35	-2.6
1,084,786	+		MPMX19_01044	0.35	-0.1
1,084,786	+		MPMX19_01044	0.35	+0.4
1,084,786	+		MPMX19_01044	0.35	+0.2
1,084,786	+		MPMX19_01044	0.35	-1.4
1,084,786	+		MPMX19_01044	0.35	+1.5
1,084,786	+		MPMX19_01044	0.35	-2.1
1,084,786	+		MPMX19_01044	0.35	-0.6
1,084,787	-		MPMX19_01044	0.35	+0.5
1,084,787	-		MPMX19_01044	0.35	-1.3
1,084,787	-		MPMX19_01044	0.35	-0.8
1,084,787	-		MPMX19_01044	0.35	+0.0
1,084,787	-		MPMX19_01044	0.35	-0.2
1,084,787	-		MPMX19_01044	0.35	+0.2
1,084,787	-		MPMX19_01044	0.35	+1.7
1,084,787	-		MPMX19_01044	0.35	-0.8
1,084,787	-		MPMX19_01044	0.35	-0.6
1,084,858	+		MPMX19_01044	0.77	-0.8
1,084,858	+		MPMX19_01044	0.77	+0.1
1,084,858	+		MPMX19_01044	0.77	-0.2
1,084,858	+		MPMX19_01044	0.77	+0.4
1,084,858	+		MPMX19_01044	0.77	-1.3
1,084,858	+		MPMX19_01044	0.77	-0.0
1,084,859	-		MPMX19_01044	0.77	+0.2
1,084,965	+				+0.0
1,084,965	+				-1.2
1,084,965	+				-0.2
1,084,965	+				-0.8
1,084,966	-				-0.3
1,084,966	-				-1.4
1,084,966	-				-2.3
1,085,153	+		MPMX19_01045	0.12	-0.3
1,085,153	+		MPMX19_01045	0.12	-2.7
1,085,153	+		MPMX19_01045	0.12	-1.9
1,085,153	+		MPMX19_01045	0.12	+0.4
1,085,153	+		MPMX19_01045	0.12	-0.7
1,085,153	+		MPMX19_01045	0.12	+0.1
1,085,153	+		MPMX19_01045	0.12	-0.6
1,085,154	-		MPMX19_01045	0.12	-0.7
1,085,154	-		MPMX19_01045	0.12	-1.0
1,085,154	-		MPMX19_01045	0.12	-0.9
1,085,154	-		MPMX19_01045	0.12	-1.3
1,085,154	-		MPMX19_01045	0.12	-0.0
1,085,243	+		MPMX19_01045	0.19	-0.7
1,085,243	+		MPMX19_01045	0.19	-1.7
1,085,243	+		MPMX19_01045	0.19	+1.1
1,085,445	+		MPMX19_01045	0.34	-1.7
1,085,445	+		MPMX19_01045	0.34	-0.6
1,085,445	+		MPMX19_01045	0.34	-0.8
1,085,445	+		MPMX19_01045	0.34	+2.0
1,085,445	+		MPMX19_01045	0.34	+1.0
1,085,445	+		MPMX19_01045	0.34	+1.4
1,085,445	+		MPMX19_01045	0.34	+0.1
1,085,445	+		MPMX19_01045	0.34	-0.2
1,085,445	+		MPMX19_01045	0.34	-0.1
1,085,445	+		MPMX19_01045	0.34	-0.9
1,085,445	+		MPMX19_01045	0.34	+0.8
1,085,445	+		MPMX19_01045	0.34	-0.8
1,085,445	+		MPMX19_01045	0.34	-0.8
1,085,445	+		MPMX19_01045	0.34	-0.8
1,085,445	+		MPMX19_01045	0.34	+0.2
1,085,445	+		MPMX19_01045	0.34	-0.0
1,085,445	+		MPMX19_01045	0.34	-0.0
1,085,445	+		MPMX19_01045	0.34	+2.6
1,085,445	+		MPMX19_01045	0.34	-1.2
1,085,445	+		MPMX19_01045	0.34	-1.3
1,085,445	+		MPMX19_01045	0.34	+0.2
1,085,445	+		MPMX19_01045	0.34	+0.4
1,085,445	+		MPMX19_01045	0.34	-0.1
1,085,445	+		MPMX19_01045	0.34	+1.0
1,085,445	+		MPMX19_01045	0.34	-0.5
1,085,446	-		MPMX19_01045	0.34	-0.2
1,085,446	-		MPMX19_01045	0.34	-0.9
1,085,446	-		MPMX19_01045	0.34	-0.0
1,085,446	-		MPMX19_01045	0.34	-1.2
1,085,446	-		MPMX19_01045	0.34	-0.4
1,085,446	-		MPMX19_01045	0.34	+0.4
1,085,446	-		MPMX19_01045	0.34	+1.7
1,085,446	-		MPMX19_01045	0.34	-0.0
1,085,446	-		MPMX19_01045	0.34	-0.0
1,085,446	-		MPMX19_01045	0.34	-0.5
1,085,446	-		MPMX19_01045	0.34	+0.2
1,085,446	-		MPMX19_01045	0.34	+1.4
1,085,446	-		MPMX19_01045	0.34	-0.8
1,085,446	-		MPMX19_01045	0.34	-0.8
1,085,446	-		MPMX19_01045	0.34	-0.5
1,085,446	-		MPMX19_01045	0.34	-0.1
1,085,446	-		MPMX19_01045	0.34	-0.4
1,085,446	-		MPMX19_01045	0.34	-2.3
1,085,446	-		MPMX19_01045	0.34	-1.0
1,085,446	-		MPMX19_01045	0.34	+0.4
1,085,446	-		MPMX19_01045	0.34	-1.1
1,085,446	-		MPMX19_01045	0.34	+0.2
1,085,446	-		MPMX19_01045	0.34	-0.0
1,085,446	-		MPMX19_01045	0.34	-2.5
1,085,446	-		MPMX19_01045	0.34	-1.2
1,085,446	-		MPMX19_01045	0.34	-0.8
1,085,446	-		MPMX19_01045	0.34	-0.9
1,085,858	+		MPMX19_01045	0.65	-0.6
1,085,859	-		MPMX19_01045	0.65	-0.2
1,085,859	-		MPMX19_01045	0.65	+0.7
1,085,859	-		MPMX19_01045	0.65	+0.6
1,085,859	-		MPMX19_01045	0.65	-2.0
1,085,860	+		MPMX19_01045	0.65	+0.2
1,085,860	+		MPMX19_01045	0.65	-0.8
1,085,860	+		MPMX19_01045	0.65	+0.5
1,085,860	+		MPMX19_01045	0.65	-2.0
1,085,860	+		MPMX19_01045	0.65	+0.1
1,085,860	+		MPMX19_01045	0.65	-1.5
1,085,860	+		MPMX19_01045	0.65	-1.1
1,085,860	+		MPMX19_01045	0.65	-0.9
1,085,860	+		MPMX19_01045	0.65	-0.0
1,085,860	+		MPMX19_01045	0.65	+0.2
1,085,860	+		MPMX19_01045	0.65	+0.4
1,085,860	+		MPMX19_01045	0.65	-1.3
1,085,860	+		MPMX19_01045	0.65	+0.1
1,085,860	+		MPMX19_01045	0.65	-0.6
1,085,860	+		MPMX19_01045	0.65	-1.8
1,085,860	+		MPMX19_01045	0.65	+0.5
1,085,861	-		MPMX19_01045	0.65	-0.7
1,085,861	-		MPMX19_01045	0.65	+0.0
1,085,861	-		MPMX19_01045	0.65	-1.2
1,085,861	-		MPMX19_01045	0.65	+0.1
1,085,861	-		MPMX19_01045	0.65	-0.8
1,085,861	-		MPMX19_01045	0.65	+0.3
1,085,861	-		MPMX19_01045	0.65	-0.9
1,085,861	-		MPMX19_01045	0.65	+0.4
1,085,861	-		MPMX19_01045	0.65	+0.5
1,085,861	-		MPMX19_01045	0.65	+2.6
1,085,861	-		MPMX19_01045	0.65	+0.9
1,085,861	-		MPMX19_01045	0.65	-1.1
1,085,992	+		MPMX19_01045	0.75	+2.0
1,085,992	+		MPMX19_01045	0.75	-0.7
1,085,992	+		MPMX19_01045	0.75	+1.2
1,085,992	+		MPMX19_01045	0.75	+1.4
1,085,993	-		MPMX19_01045	0.75	-0.0
1,085,993	-		MPMX19_01045	0.75	+0.9
1,085,993	-		MPMX19_01045	0.75	-0.0
1,085,993	-		MPMX19_01045	0.75	-1.2
1,086,004	+		MPMX19_01045	0.76	-0.7
1,086,004	+		MPMX19_01045	0.76	-1.4
1,086,004	+		MPMX19_01045	0.76	+0.7
1,086,004	+		MPMX19_01045	0.76	+0.7
1,086,004	+		MPMX19_01045	0.76	-1.5
1,086,005	-		MPMX19_01045	0.76	+0.4
1,086,005	-		MPMX19_01045	0.76	-1.0
1,086,005	-		MPMX19_01045	0.76	+0.4
1,086,005	-		MPMX19_01045	0.76	-1.3
1,086,005	-		MPMX19_01045	0.76	-0.7
1,086,005	-		MPMX19_01045	0.76	-2.1
1,086,067	+		MPMX19_01045	0.80	-1.6
1,086,067	+		MPMX19_01045	0.80	-1.0
1,086,067	+		MPMX19_01045	0.80	+0.5
1,086,067	+		MPMX19_01045	0.80	-0.6
1,086,067	+		MPMX19_01045	0.80	-0.8
1,086,067	+		MPMX19_01045	0.80	-1.6
1,086,067	+		MPMX19_01045	0.80	-1.6
1,086,067	+		MPMX19_01045	0.80	-0.6
1,086,068	-		MPMX19_01045	0.80	+0.6
1,086,068	-		MPMX19_01045	0.80	-0.8
1,086,068	-		MPMX19_01045	0.80	-1.0
1,086,068	-		MPMX19_01045	0.80	+1.7
1,086,068	-		MPMX19_01045	0.80	-0.4
1,086,068	-		MPMX19_01045	0.80	-0.7
1,086,068	-		MPMX19_01045	0.80	-1.0
1,086,068	-		MPMX19_01045	0.80	+0.8
1,086,190	+		MPMX19_01045	0.89	-0.5
1,086,191	-		MPMX19_01045	0.89	+0.4
1,086,196	+		MPMX19_01045	0.90	-0.6
1,086,196	+		MPMX19_01045	0.90	-1.2
1,086,196	+		MPMX19_01045	0.90	+1.0
1,086,196	+		MPMX19_01045	0.90	+1.0
1,086,196	+		MPMX19_01045	0.90	-1.3
1,086,196	+		MPMX19_01045	0.90	-0.2
1,086,196	+		MPMX19_01045	0.90	+2.6
1,086,196	+		MPMX19_01045	0.90	-0.0
1,086,196	+		MPMX19_01045	0.90	-0.5
1,086,196	+		MPMX19_01045	0.90	+1.0
1,086,196	+		MPMX19_01045	0.90	+0.6
1,086,197	-		MPMX19_01045	0.90	-0.0
1,086,197	-		MPMX19_01045	0.90	+0.1
1,086,197	-		MPMX19_01045	0.90	-0.9
1,086,197	-		MPMX19_01045	0.90	-2.1
1,086,197	-		MPMX19_01045	0.90	-0.1
1,086,197	-		MPMX19_01045	0.90	-0.0
1,086,197	-		MPMX19_01045	0.90	-0.6
1,086,197	-		MPMX19_01045	0.90	-1.7
1,086,235	+				+0.4
1,086,235	+				-0.0
1,086,235	+				-1.5
1,086,235	+				-1.4
1,086,236	-				-1.2
1,086,236	-				+0.6
1,086,236	-				-2.3
1,086,369	-				-0.7
1,086,369	-				-1.3
1,086,463	-				-1.2
1,086,463	-				+0.2
1,086,566	+				-0.1
1,086,566	+				-1.4
1,086,567	-				-0.5
1,086,626	-				-0.6
1,086,639	+				+2.0
1,086,639	+				+0.1
1,086,639	+				+0.1
1,086,639	+				-0.7
1,086,639	+				+0.7
1,086,639	+				-1.2
1,086,639	+				+0.5
1,086,639	+				-1.0
1,086,639	+				-1.2
1,086,639	+				+0.7
1,086,640	-				-1.2
1,086,640	-				-1.2
1,086,640	-				+0.3
1,086,640	-				-0.4
1,086,640	-				-0.3
1,086,640	-				-1.9
1,086,640	-				-1.6
1,087,240	+		MPMX19_01046	0.62	-0.8
1,087,240	+		MPMX19_01046	0.62	-1.5
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	+0.5
1,087,240	+		MPMX19_01046	0.62	+0.0
1,087,240	+		MPMX19_01046	0.62	-0.0
1,087,240	+		MPMX19_01046	0.62	-1.3
1,087,240	+		MPMX19_01046	0.62	+0.6
1,087,240	+		MPMX19_01046	0.62	-1.2
1,087,240	+		MPMX19_01046	0.62	+0.7
1,087,240	+		MPMX19_01046	0.62	+0.2
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	-0.8
1,087,240	+		MPMX19_01046	0.62	+0.2
1,087,240	+		MPMX19_01046	0.62	-2.1
1,087,240	+		MPMX19_01046	0.62	-0.6
1,087,240	+		MPMX19_01046	0.62	-0.4
1,087,240	+		MPMX19_01046	0.62	-0.1
1,087,240	+		MPMX19_01046	0.62	-2.3
1,087,240	+		MPMX19_01046	0.62	-1.9
1,087,240	+		MPMX19_01046	0.62	-0.5
1,087,240	+		MPMX19_01046	0.62	-1.6
1,087,276	+		MPMX19_01046	0.66	-0.1
1,087,276	+		MPMX19_01046	0.66	+0.3
1,087,276	+		MPMX19_01046	0.66	+0.6
1,087,276	+		MPMX19_01046	0.66	-0.4
1,087,276	+		MPMX19_01046	0.66	-1.9
1,087,276	+		MPMX19_01046	0.66	+0.8
1,087,276	+		MPMX19_01046	0.66	-1.8
1,087,277	-		MPMX19_01046	0.66	-0.7
1,087,277	-		MPMX19_01046	0.66	+0.3
1,087,277	-		MPMX19_01046	0.66	-1.4
1,087,277	-		MPMX19_01046	0.66	-1.8
1,087,277	-		MPMX19_01046	0.66	-2.0