Experiment: D-Glucose and D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4035 and GFF4036 overlap by 1 nucleotides GFF4036 and GFF4037 overlap by 4 nucleotides GFF4037 and GFF4038 are separated by 164 nucleotides
GFF4035 - Aspartate aminotransferase, at 301,082 to 302,251
GFF4035
GFF4036 - Sugar fermentation stimulation protein A, at 302,251 to 302,964
GFF4036
GFF4037 - hypothetical protein, at 302,961 to 303,278
GFF4037
GFF4038 - Hemin-binding periplasmic protein HmuT, at 303,443 to 304,315
GFF4038
Position (kb) 302
303
304 Strain fitness (log2 ratio) -2
-1
0
1
2 at 302.039 kb on + strand, within GFF4035 at 302.039 kb on + strand, within GFF4035 at 302.039 kb on + strand, within GFF4035 at 302.040 kb on - strand, within GFF4035 at 302.040 kb on - strand, within GFF4035 at 302.040 kb on - strand, within GFF4035 at 302.045 kb on + strand, within GFF4035 at 302.046 kb on - strand, within GFF4035 at 302.046 kb on - strand, within GFF4035 at 302.177 kb on + strand at 302.260 kb on + strand at 302.261 kb on - strand at 302.563 kb on - strand, within GFF4036 at 302.588 kb on - strand, within GFF4036 at 302.644 kb on + strand, within GFF4036 at 302.644 kb on + strand, within GFF4036 at 302.644 kb on + strand, within GFF4036 at 302.645 kb on - strand, within GFF4036 at 302.785 kb on + strand, within GFF4036 at 302.785 kb on + strand, within GFF4036 at 302.785 kb on + strand, within GFF4036 at 302.785 kb on + strand, within GFF4036 at 302.786 kb on - strand, within GFF4036 at 302.786 kb on - strand, within GFF4036 at 302.786 kb on - strand, within GFF4036 at 302.897 kb on - strand at 302.954 kb on + strand at 302.962 kb on + strand at 302.963 kb on - strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.987 kb on + strand at 302.988 kb on - strand at 302.988 kb on - strand at 302.988 kb on - strand at 303.169 kb on + strand, within GFF4037 at 303.170 kb on - strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.175 kb on + strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.176 kb on - strand, within GFF4037 at 303.289 kb on + strand at 303.289 kb on + strand at 303.289 kb on + strand at 303.289 kb on + strand at 303.289 kb on + strand at 303.290 kb on - strand at 303.290 kb on - strand at 303.290 kb on - strand at 303.310 kb on + strand at 303.310 kb on + strand at 303.310 kb on + strand at 303.310 kb on + strand at 303.311 kb on - strand at 303.391 kb on + strand at 303.391 kb on + strand at 303.391 kb on + strand at 303.392 kb on - strand at 303.392 kb on - strand at 303.442 kb on + strand at 303.875 kb on + strand, within GFF4038 at 303.875 kb on + strand, within GFF4038 at 303.875 kb on + strand, within GFF4038 at 303.876 kb on - strand, within GFF4038 at 303.876 kb on - strand, within GFF4038 at 304.052 kb on - strand, within GFF4038 at 304.059 kb on - strand, within GFF4038 at 304.059 kb on - strand, within GFF4038
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose and D,L-Lactate (C) remove 302,039 + GFF4035 0.82 -0.3 302,039 + GFF4035 0.82 -0.3 302,039 + GFF4035 0.82 +0.2 302,040 - GFF4035 0.82 +0.1 302,040 - GFF4035 0.82 -0.3 302,040 - GFF4035 0.82 +0.1 302,045 + GFF4035 0.82 +0.0 302,046 - GFF4035 0.82 -0.6 302,046 - GFF4035 0.82 -0.1 302,177 + -0.6 302,260 + -0.1 302,261 - -0.6 302,563 - GFF4036 0.44 +1.3 302,588 - GFF4036 0.47 +0.7 302,644 + GFF4036 0.55 -0.6 302,644 + GFF4036 0.55 -0.3 302,644 + GFF4036 0.55 -0.2 302,645 - GFF4036 0.55 -0.1 302,785 + GFF4036 0.75 -0.6 302,785 + GFF4036 0.75 +0.5 302,785 + GFF4036 0.75 +0.6 302,785 + GFF4036 0.75 -0.9 302,786 - GFF4036 0.75 +0.4 302,786 - GFF4036 0.75 -0.0 302,786 - GFF4036 0.75 -2.3 302,897 - +0.1 302,954 + +0.1 302,962 + +0.2 302,963 - +0.3 302,987 + +0.2 302,987 + -0.8 302,987 + -1.3 302,987 + -1.1 302,987 + +1.0 302,987 + -0.1 302,987 + -0.1 302,987 + -0.4 302,988 - -1.0 302,988 - -0.4 302,988 - +2.0 303,169 + GFF4037 0.65 +0.7 303,170 - GFF4037 0.66 -0.3 303,175 + GFF4037 0.67 -0.4 303,175 + GFF4037 0.67 +0.7 303,175 + GFF4037 0.67 -0.2 303,175 + GFF4037 0.67 +0.4 303,175 + GFF4037 0.67 -0.6 303,175 + GFF4037 0.67 +0.5 303,175 + GFF4037 0.67 +0.7 303,175 + GFF4037 0.67 -0.2 303,176 - GFF4037 0.68 +0.5 303,176 - GFF4037 0.68 -0.2 303,176 - GFF4037 0.68 +0.4 303,176 - GFF4037 0.68 -1.0 303,176 - GFF4037 0.68 -0.4 303,176 - GFF4037 0.68 -0.1 303,176 - GFF4037 0.68 +0.5 303,289 + +0.5 303,289 + +0.3 303,289 + -0.4 303,289 + +0.3 303,289 + -0.0 303,290 - +0.1 303,290 - +1.0 303,290 - -0.2 303,310 + -0.5 303,310 + +0.1 303,310 + +1.2 303,310 + -0.2 303,311 - +1.0 303,391 + +0.4 303,391 + +0.9 303,391 + +0.9 303,392 - -0.6 303,392 - -0.8 303,442 + -2.2 303,875 + GFF4038 0.49 -0.4 303,875 + GFF4038 0.49 -0.6 303,875 + GFF4038 0.49 -0.5 303,876 - GFF4038 0.50 -0.7 303,876 - GFF4038 0.50 -0.0 304,052 - GFF4038 0.70 -1.1 304,059 - GFF4038 0.71 +0.3 304,059 - GFF4038 0.71 -1.3
Or see this region's nucleotide sequence