Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00229

Experiment: L-Lysine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00228 and MPMX26_00229 are separated by 107 nucleotidesMPMX26_00229 and MPMX26_00230 are separated by 106 nucleotidesMPMX26_00230 and MPMX26_00231 are separated by 69 nucleotides MPMX26_00228: MPMX26_00228 - UvrABC system protein C, at 246,958 to 248,757 _00228 MPMX26_00229: MPMX26_00229 - hypothetical protein, at 248,865 to 249,662 _00229 MPMX26_00230: MPMX26_00230 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 249,769 to 250,356 _00230 MPMX26_00231: MPMX26_00231 - Putative multidrug export ATP-binding/permease protein, at 250,426 to 252,228 _00231 Position (kb) 248 249 250Strain fitness (log2 ratio) -1 0 1 2at 247.893 kb on + strand, within MPMX26_00228at 247.926 kb on + strand, within MPMX26_00228at 247.926 kb on + strand, within MPMX26_00228at 247.926 kb on + strand, within MPMX26_00228at 247.978 kb on + strand, within MPMX26_00228at 247.996 kb on + strand, within MPMX26_00228at 248.006 kb on + strand, within MPMX26_00228at 248.024 kb on + strand, within MPMX26_00228at 248.032 kb on + strand, within MPMX26_00228at 248.059 kb on + strand, within MPMX26_00228at 248.075 kb on + strand, within MPMX26_00228at 248.075 kb on + strand, within MPMX26_00228at 248.075 kb on + strand, within MPMX26_00228at 248.075 kb on + strand, within MPMX26_00228at 248.075 kb on + strand, within MPMX26_00228at 248.102 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.112 kb on + strand, within MPMX26_00228at 248.113 kb on + strand, within MPMX26_00228at 248.113 kb on + strand, within MPMX26_00228at 248.113 kb on + strand, within MPMX26_00228at 248.136 kb on + strand, within MPMX26_00228at 248.162 kb on - strand, within MPMX26_00228at 248.168 kb on + strand, within MPMX26_00228at 248.205 kb on + strand, within MPMX26_00228at 248.218 kb on + strand, within MPMX26_00228at 248.247 kb on + strand, within MPMX26_00228at 248.247 kb on + strand, within MPMX26_00228at 248.253 kb on + strand, within MPMX26_00228at 248.275 kb on + strand, within MPMX26_00228at 248.275 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.287 kb on + strand, within MPMX26_00228at 248.295 kb on - strand, within MPMX26_00228at 248.344 kb on + strand, within MPMX26_00228at 248.345 kb on + strand, within MPMX26_00228at 248.353 kb on + strand, within MPMX26_00228at 248.422 kb on + strand, within MPMX26_00228at 248.449 kb on + strand, within MPMX26_00228at 248.449 kb on + strand, within MPMX26_00228at 248.449 kb on + strand, within MPMX26_00228at 248.457 kb on + strand, within MPMX26_00228at 248.457 kb on + strand, within MPMX26_00228at 248.486 kb on + strand, within MPMX26_00228at 248.493 kb on + strand, within MPMX26_00228at 248.493 kb on + strand, within MPMX26_00228at 248.493 kb on + strand, within MPMX26_00228at 248.493 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.551 kb on + strand, within MPMX26_00228at 248.607 kb on + strandat 248.615 kb on - strandat 248.625 kb on + strandat 248.625 kb on + strandat 248.658 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.668 kb on + strandat 248.670 kb on + strandat 248.670 kb on + strandat 248.909 kb on + strandat 248.929 kb on + strandat 248.983 kb on + strand, within MPMX26_00229at 248.983 kb on + strand, within MPMX26_00229at 248.986 kb on - strand, within MPMX26_00229at 248.994 kb on + strand, within MPMX26_00229at 249.023 kb on + strand, within MPMX26_00229at 249.025 kb on + strand, within MPMX26_00229at 249.030 kb on + strand, within MPMX26_00229at 249.031 kb on + strand, within MPMX26_00229at 249.046 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.051 kb on + strand, within MPMX26_00229at 249.078 kb on + strand, within MPMX26_00229at 249.117 kb on + strand, within MPMX26_00229at 249.117 kb on + strand, within MPMX26_00229at 249.143 kb on + strand, within MPMX26_00229at 249.144 kb on + strand, within MPMX26_00229at 249.151 kb on + strand, within MPMX26_00229at 249.156 kb on + strand, within MPMX26_00229at 249.161 kb on + strand, within MPMX26_00229at 249.283 kb on + strand, within MPMX26_00229at 249.283 kb on + strand, within MPMX26_00229at 249.302 kb on + strand, within MPMX26_00229at 249.302 kb on + strand, within MPMX26_00229at 249.302 kb on + strand, within MPMX26_00229at 249.323 kb on + strand, within MPMX26_00229at 249.325 kb on + strand, within MPMX26_00229at 249.343 kb on + strand, within MPMX26_00229at 249.494 kb on + strand, within MPMX26_00229at 249.651 kb on + strandat 250.340 kb on + strandat 250.340 kb on + strandat 250.340 kb on + strandat 250.350 kb on + strandat 250.350 kb on + strandat 250.351 kb on + strandat 250.351 kb on + strandat 250.351 kb on + strandat 250.622 kb on - strand, within MPMX26_00231at 250.649 kb on - strand, within MPMX26_00231at 250.662 kb on + strand, within MPMX26_00231

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Lysine (N)
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247,893 + MPMX26_00228 0.52 -0.7
247,926 + MPMX26_00228 0.54 -0.1
247,926 + MPMX26_00228 0.54 -0.1
247,926 + MPMX26_00228 0.54 +0.2
247,978 + MPMX26_00228 0.57 -0.7
247,996 + MPMX26_00228 0.58 +0.3
248,006 + MPMX26_00228 0.58 -0.9
248,024 + MPMX26_00228 0.59 -0.7
248,032 + MPMX26_00228 0.60 -0.0
248,059 + MPMX26_00228 0.61 -0.5
248,075 + MPMX26_00228 0.62 -0.3
248,075 + MPMX26_00228 0.62 -0.6
248,075 + MPMX26_00228 0.62 +0.7
248,075 + MPMX26_00228 0.62 +0.4
248,075 + MPMX26_00228 0.62 +0.5
248,102 + MPMX26_00228 0.64 +0.8
248,112 + MPMX26_00228 0.64 +0.4
248,112 + MPMX26_00228 0.64 -0.9
248,112 + MPMX26_00228 0.64 -0.2
248,112 + MPMX26_00228 0.64 -0.3
248,112 + MPMX26_00228 0.64 -0.2
248,112 + MPMX26_00228 0.64 -0.3
248,113 + MPMX26_00228 0.64 -0.2
248,113 + MPMX26_00228 0.64 +0.3
248,113 + MPMX26_00228 0.64 -0.3
248,136 + MPMX26_00228 0.65 -0.2
248,162 - MPMX26_00228 0.67 +1.3
248,168 + MPMX26_00228 0.67 -0.2
248,205 + MPMX26_00228 0.69 -1.0
248,218 + MPMX26_00228 0.70 +0.3
248,247 + MPMX26_00228 0.72 +0.5
248,247 + MPMX26_00228 0.72 +0.1
248,253 + MPMX26_00228 0.72 +0.5
248,275 + MPMX26_00228 0.73 +0.4
248,275 + MPMX26_00228 0.73 -0.2
248,287 + MPMX26_00228 0.74 -0.3
248,287 + MPMX26_00228 0.74 +1.0
248,287 + MPMX26_00228 0.74 +0.6
248,287 + MPMX26_00228 0.74 +0.1
248,287 + MPMX26_00228 0.74 +0.3
248,287 + MPMX26_00228 0.74 +0.3
248,287 + MPMX26_00228 0.74 -0.4
248,295 - MPMX26_00228 0.74 +0.1
248,344 + MPMX26_00228 0.77 +0.1
248,345 + MPMX26_00228 0.77 -1.0
248,353 + MPMX26_00228 0.78 -0.7
248,422 + MPMX26_00228 0.81 +0.2
248,449 + MPMX26_00228 0.83 -0.0
248,449 + MPMX26_00228 0.83 -0.3
248,449 + MPMX26_00228 0.83 -1.6
248,457 + MPMX26_00228 0.83 +0.7
248,457 + MPMX26_00228 0.83 -0.3
248,486 + MPMX26_00228 0.85 -1.1
248,493 + MPMX26_00228 0.85 -0.5
248,493 + MPMX26_00228 0.85 +0.5
248,493 + MPMX26_00228 0.85 -1.1
248,493 + MPMX26_00228 0.85 -0.1
248,551 + MPMX26_00228 0.89 +0.8
248,551 + MPMX26_00228 0.89 +0.0
248,551 + MPMX26_00228 0.89 -0.0
248,551 + MPMX26_00228 0.89 +0.3
248,551 + MPMX26_00228 0.89 +0.2
248,551 + MPMX26_00228 0.89 +0.0
248,607 + -0.3
248,615 - -0.2
248,625 + +0.4
248,625 + +0.4
248,658 + +0.4
248,668 + +0.1
248,668 + +0.7
248,668 + +0.3
248,668 + -1.5
248,668 + +0.1
248,668 + -0.6
248,668 + -1.1
248,670 + -0.1
248,670 + +0.0
248,909 + +0.3
248,929 + -1.0
248,983 + MPMX26_00229 0.15 +0.7
248,983 + MPMX26_00229 0.15 -0.1
248,986 - MPMX26_00229 0.15 +0.5
248,994 + MPMX26_00229 0.16 -0.7
249,023 + MPMX26_00229 0.20 -0.2
249,025 + MPMX26_00229 0.20 -0.4
249,030 + MPMX26_00229 0.21 -0.4
249,031 + MPMX26_00229 0.21 -0.4
249,046 + MPMX26_00229 0.23 -0.9
249,051 + MPMX26_00229 0.23 +1.6
249,051 + MPMX26_00229 0.23 +0.6
249,051 + MPMX26_00229 0.23 +0.5
249,051 + MPMX26_00229 0.23 +0.5
249,051 + MPMX26_00229 0.23 -0.7
249,051 + MPMX26_00229 0.23 -0.5
249,051 + MPMX26_00229 0.23 +0.8
249,051 + MPMX26_00229 0.23 +1.2
249,078 + MPMX26_00229 0.27 +1.9
249,117 + MPMX26_00229 0.32 +0.7
249,117 + MPMX26_00229 0.32 +1.2
249,143 + MPMX26_00229 0.35 +0.2
249,144 + MPMX26_00229 0.35 -0.7
249,151 + MPMX26_00229 0.36 +0.2
249,156 + MPMX26_00229 0.36 -0.0
249,161 + MPMX26_00229 0.37 -1.7
249,283 + MPMX26_00229 0.52 -0.8
249,283 + MPMX26_00229 0.52 +0.8
249,302 + MPMX26_00229 0.55 +1.2
249,302 + MPMX26_00229 0.55 +1.6
249,302 + MPMX26_00229 0.55 +0.2
249,323 + MPMX26_00229 0.57 +0.7
249,325 + MPMX26_00229 0.58 +0.1
249,343 + MPMX26_00229 0.60 -0.4
249,494 + MPMX26_00229 0.79 +0.2
249,651 + -0.3
250,340 + -1.0
250,340 + +0.2
250,340 + -0.7
250,350 + -0.9
250,350 + -0.2
250,351 + -0.6
250,351 + -0.3
250,351 + -1.6
250,622 - MPMX26_00231 0.11 +0.1
250,649 - MPMX26_00231 0.12 -0.3
250,662 + MPMX26_00231 0.13 +0.6

Or see this region's nucleotide sequence