Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02162

Experiment: L-Serine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02161 and MPMX26_02162 are separated by 226 nucleotidesMPMX26_02162 and MPMX26_02163 are separated by 30 nucleotidesMPMX26_02163 and MPMX26_02164 are separated by 9 nucleotides MPMX26_02161: MPMX26_02161 - Periplasmic pH-dependent serine endoprotease DegQ, at 2,215,843 to 2,217,225 _02161 MPMX26_02162: MPMX26_02162 - L-aspartate oxidase, at 2,217,452 to 2,219,104 _02162 MPMX26_02163: MPMX26_02163 - Thymidylate kinase, at 2,219,135 to 2,219,743 _02163 MPMX26_02164: MPMX26_02164 - Endolytic murein transglycosylase, at 2,219,753 to 2,220,796 _02164 Position (kb) 2217 2218 2219 2220Strain fitness (log2 ratio) -2 -1 0 1at 2216.524 kb on - strand, within MPMX26_02161at 2216.657 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.764 kb on - strand, within MPMX26_02161at 2216.787 kb on - strand, within MPMX26_02161at 2216.795 kb on - strand, within MPMX26_02161at 2216.851 kb on - strand, within MPMX26_02161at 2216.851 kb on - strand, within MPMX26_02161at 2216.851 kb on - strand, within MPMX26_02161at 2216.898 kb on - strand, within MPMX26_02161at 2216.905 kb on - strand, within MPMX26_02161at 2216.934 kb on - strand, within MPMX26_02161at 2217.013 kb on - strand, within MPMX26_02161at 2217.042 kb on - strand, within MPMX26_02161at 2217.105 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.118 kb on - strandat 2217.123 kb on - strandat 2217.154 kb on - strandat 2217.168 kb on - strandat 2217.168 kb on - strandat 2217.168 kb on - strandat 2217.512 kb on + strandat 2217.542 kb on + strandat 2217.544 kb on + strandat 2217.572 kb on + strandat 2217.572 kb on + strandat 2217.572 kb on + strandat 2217.592 kb on + strandat 2217.594 kb on + strandat 2217.599 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.604 kb on + strandat 2217.620 kb on + strand, within MPMX26_02162at 2217.620 kb on + strand, within MPMX26_02162at 2217.641 kb on + strand, within MPMX26_02162at 2217.659 kb on + strand, within MPMX26_02162at 2217.701 kb on + strand, within MPMX26_02162at 2217.701 kb on + strand, within MPMX26_02162at 2217.701 kb on + strand, within MPMX26_02162at 2217.701 kb on + strand, within MPMX26_02162at 2217.713 kb on + strand, within MPMX26_02162at 2217.722 kb on + strand, within MPMX26_02162at 2217.763 kb on + strand, within MPMX26_02162at 2217.763 kb on + strand, within MPMX26_02162at 2217.772 kb on + strand, within MPMX26_02162at 2217.806 kb on + strand, within MPMX26_02162at 2217.872 kb on + strand, within MPMX26_02162at 2217.874 kb on + strand, within MPMX26_02162at 2217.874 kb on + strand, within MPMX26_02162at 2217.874 kb on + strand, within MPMX26_02162at 2217.874 kb on + strand, within MPMX26_02162at 2218.056 kb on + strand, within MPMX26_02162at 2218.078 kb on + strand, within MPMX26_02162at 2218.114 kb on + strand, within MPMX26_02162at 2218.126 kb on + strand, within MPMX26_02162at 2218.126 kb on + strand, within MPMX26_02162at 2218.129 kb on + strand, within MPMX26_02162at 2218.175 kb on + strand, within MPMX26_02162at 2218.189 kb on + strand, within MPMX26_02162at 2218.189 kb on + strand, within MPMX26_02162at 2218.196 kb on + strand, within MPMX26_02162at 2218.216 kb on + strand, within MPMX26_02162at 2218.264 kb on + strand, within MPMX26_02162at 2218.310 kb on + strand, within MPMX26_02162at 2218.310 kb on + strand, within MPMX26_02162at 2218.324 kb on + strand, within MPMX26_02162at 2218.378 kb on + strand, within MPMX26_02162at 2218.426 kb on + strand, within MPMX26_02162at 2218.427 kb on + strand, within MPMX26_02162at 2218.441 kb on + strand, within MPMX26_02162at 2218.469 kb on + strand, within MPMX26_02162at 2218.517 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.573 kb on + strand, within MPMX26_02162at 2218.576 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.583 kb on + strand, within MPMX26_02162at 2218.621 kb on + strand, within MPMX26_02162at 2218.652 kb on + strand, within MPMX26_02162at 2218.661 kb on + strand, within MPMX26_02162at 2218.672 kb on + strand, within MPMX26_02162at 2218.672 kb on + strand, within MPMX26_02162at 2218.682 kb on + strand, within MPMX26_02162at 2218.706 kb on + strand, within MPMX26_02162at 2218.706 kb on + strand, within MPMX26_02162at 2218.723 kb on + strand, within MPMX26_02162at 2218.736 kb on + strand, within MPMX26_02162at 2218.736 kb on + strand, within MPMX26_02162at 2218.774 kb on + strand, within MPMX26_02162at 2218.774 kb on + strand, within MPMX26_02162at 2218.774 kb on + strand, within MPMX26_02162at 2218.794 kb on + strand, within MPMX26_02162at 2218.799 kb on + strand, within MPMX26_02162at 2218.915 kb on + strand, within MPMX26_02162at 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.943 kb on + strandat 2218.951 kb on + strandat 2218.970 kb on + strandat 2218.979 kb on + strandat 2218.979 kb on + strandat 2219.033 kb on + strandat 2219.084 kb on + strandat 2219.091 kb on - strandat 2219.091 kb on - strandat 2219.096 kb on - strandat 2219.112 kb on - strandat 2219.786 kb on - strandat 2219.791 kb on - strandat 2219.791 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.796 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.806 kb on - strandat 2219.836 kb on - strandat 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2219.975 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.005 kb on - strand, within MPMX26_02164at 2220.062 kb on - strand, within MPMX26_02164at 2220.097 kb on - strand, within MPMX26_02164

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
remove
2,216,524 - MPMX26_02161 0.49 -0.5
2,216,657 - MPMX26_02161 0.59 +0.2
2,216,764 - MPMX26_02161 0.67 +0.3
2,216,764 - MPMX26_02161 0.67 +0.8
2,216,764 - MPMX26_02161 0.67 -0.4
2,216,764 - MPMX26_02161 0.67 +1.0
2,216,764 - MPMX26_02161 0.67 -1.1
2,216,764 - MPMX26_02161 0.67 -0.7
2,216,764 - MPMX26_02161 0.67 -1.3
2,216,764 - MPMX26_02161 0.67 -1.0
2,216,764 - MPMX26_02161 0.67 +0.4
2,216,787 - MPMX26_02161 0.68 +0.5
2,216,795 - MPMX26_02161 0.69 +0.5
2,216,851 - MPMX26_02161 0.73 -0.0
2,216,851 - MPMX26_02161 0.73 -0.2
2,216,851 - MPMX26_02161 0.73 +0.0
2,216,898 - MPMX26_02161 0.76 +0.6
2,216,905 - MPMX26_02161 0.77 +0.3
2,216,934 - MPMX26_02161 0.79 +0.9
2,217,013 - MPMX26_02161 0.85 -0.1
2,217,042 - MPMX26_02161 0.87 +0.5
2,217,105 - -0.5
2,217,118 - -0.1
2,217,118 - +0.3
2,217,118 - +0.1
2,217,118 - -0.9
2,217,118 - -0.6
2,217,118 - -0.0
2,217,118 - -0.1
2,217,123 - -0.5
2,217,154 - -1.3
2,217,168 - +0.1
2,217,168 - +0.2
2,217,168 - +0.3
2,217,512 + -0.4
2,217,542 + +0.3
2,217,544 + +0.9
2,217,572 + +0.2
2,217,572 + +0.3
2,217,572 + +0.6
2,217,592 + -0.1
2,217,594 + -1.3
2,217,599 + -0.3
2,217,604 + -0.2
2,217,604 + +0.6
2,217,604 + +0.2
2,217,604 + -1.5
2,217,604 + +0.2
2,217,604 + +0.3
2,217,604 + -0.0
2,217,604 + +0.7
2,217,604 + +0.6
2,217,604 + +0.0
2,217,620 + MPMX26_02162 0.10 +0.1
2,217,620 + MPMX26_02162 0.10 +0.9
2,217,641 + MPMX26_02162 0.11 -0.3
2,217,659 + MPMX26_02162 0.13 -0.8
2,217,701 + MPMX26_02162 0.15 -0.4
2,217,701 + MPMX26_02162 0.15 -0.5
2,217,701 + MPMX26_02162 0.15 -0.0
2,217,701 + MPMX26_02162 0.15 -0.4
2,217,713 + MPMX26_02162 0.16 -0.5
2,217,722 + MPMX26_02162 0.16 -0.2
2,217,763 + MPMX26_02162 0.19 +1.2
2,217,763 + MPMX26_02162 0.19 -0.3
2,217,772 + MPMX26_02162 0.19 +0.4
2,217,806 + MPMX26_02162 0.21 +0.7
2,217,872 + MPMX26_02162 0.25 -0.4
2,217,874 + MPMX26_02162 0.26 -0.3
2,217,874 + MPMX26_02162 0.26 +0.1
2,217,874 + MPMX26_02162 0.26 -1.0
2,217,874 + MPMX26_02162 0.26 +0.5
2,218,056 + MPMX26_02162 0.37 -1.2
2,218,078 + MPMX26_02162 0.38 +0.8
2,218,114 + MPMX26_02162 0.40 -0.6
2,218,126 + MPMX26_02162 0.41 +0.1
2,218,126 + MPMX26_02162 0.41 +0.2
2,218,129 + MPMX26_02162 0.41 -0.7
2,218,175 + MPMX26_02162 0.44 -0.0
2,218,189 + MPMX26_02162 0.45 -0.6
2,218,189 + MPMX26_02162 0.45 -0.2
2,218,196 + MPMX26_02162 0.45 +0.8
2,218,216 + MPMX26_02162 0.46 -0.1
2,218,264 + MPMX26_02162 0.49 +0.9
2,218,310 + MPMX26_02162 0.52 +0.8
2,218,310 + MPMX26_02162 0.52 +0.3
2,218,324 + MPMX26_02162 0.53 -0.1
2,218,378 + MPMX26_02162 0.56 +0.1
2,218,426 + MPMX26_02162 0.59 -0.4
2,218,427 + MPMX26_02162 0.59 -0.2
2,218,441 + MPMX26_02162 0.60 +0.8
2,218,469 + MPMX26_02162 0.62 +0.3
2,218,517 + MPMX26_02162 0.64 +0.0
2,218,573 + MPMX26_02162 0.68 -0.6
2,218,573 + MPMX26_02162 0.68 -0.7
2,218,573 + MPMX26_02162 0.68 +0.6
2,218,573 + MPMX26_02162 0.68 -0.0
2,218,573 + MPMX26_02162 0.68 -0.3
2,218,573 + MPMX26_02162 0.68 -0.3
2,218,573 + MPMX26_02162 0.68 +0.3
2,218,573 + MPMX26_02162 0.68 +0.5
2,218,573 + MPMX26_02162 0.68 +0.2
2,218,576 + MPMX26_02162 0.68 -0.2
2,218,583 + MPMX26_02162 0.68 -1.0
2,218,583 + MPMX26_02162 0.68 -0.1
2,218,583 + MPMX26_02162 0.68 +0.5
2,218,583 + MPMX26_02162 0.68 -0.1
2,218,583 + MPMX26_02162 0.68 +0.3
2,218,583 + MPMX26_02162 0.68 +0.3
2,218,583 + MPMX26_02162 0.68 -0.6
2,218,583 + MPMX26_02162 0.68 +0.9
2,218,583 + MPMX26_02162 0.68 +0.4
2,218,583 + MPMX26_02162 0.68 -1.2
2,218,583 + MPMX26_02162 0.68 +0.0
2,218,583 + MPMX26_02162 0.68 +0.3
2,218,583 + MPMX26_02162 0.68 -0.3
2,218,583 + MPMX26_02162 0.68 -0.6
2,218,583 + MPMX26_02162 0.68 -0.0
2,218,583 + MPMX26_02162 0.68 +0.4
2,218,583 + MPMX26_02162 0.68 -0.5
2,218,621 + MPMX26_02162 0.71 -0.1
2,218,652 + MPMX26_02162 0.73 -1.1
2,218,661 + MPMX26_02162 0.73 +0.4
2,218,672 + MPMX26_02162 0.74 -1.6
2,218,672 + MPMX26_02162 0.74 -0.2
2,218,682 + MPMX26_02162 0.74 +0.7
2,218,706 + MPMX26_02162 0.76 +0.3
2,218,706 + MPMX26_02162 0.76 +1.1
2,218,723 + MPMX26_02162 0.77 -0.6
2,218,736 + MPMX26_02162 0.78 +0.7
2,218,736 + MPMX26_02162 0.78 +0.8
2,218,774 + MPMX26_02162 0.80 +0.8
2,218,774 + MPMX26_02162 0.80 +0.7
2,218,774 + MPMX26_02162 0.80 -0.1
2,218,794 + MPMX26_02162 0.81 -0.6
2,218,799 + MPMX26_02162 0.81 -1.1
2,218,915 + MPMX26_02162 0.89 -0.0
2,218,943 + +0.5
2,218,943 + -0.3
2,218,943 + -0.2
2,218,943 + +0.7
2,218,943 + +0.3
2,218,943 + +0.8
2,218,951 + -0.0
2,218,970 + +0.2
2,218,979 + +0.1
2,218,979 + -1.1
2,219,033 + -0.3
2,219,084 + -0.6
2,219,091 - +0.4
2,219,091 - +0.0
2,219,096 - +0.6
2,219,112 - +0.9
2,219,786 - +0.6
2,219,791 - +0.1
2,219,791 - -0.1
2,219,796 - -2.6
2,219,796 - +0.9
2,219,796 - +0.1
2,219,796 - -0.8
2,219,806 - +1.0
2,219,806 - +0.1
2,219,806 - +0.9
2,219,806 - +0.4
2,219,806 - -0.1
2,219,806 - +0.1
2,219,806 - +0.6
2,219,806 - +0.2
2,219,806 - +1.0
2,219,806 - +0.3
2,219,836 - +1.1
2,219,975 - MPMX26_02164 0.21 +0.6
2,219,975 - MPMX26_02164 0.21 +0.8
2,219,975 - MPMX26_02164 0.21 +0.6
2,219,975 - MPMX26_02164 0.21 +0.5
2,219,975 - MPMX26_02164 0.21 +0.1
2,220,005 - MPMX26_02164 0.24 +0.2
2,220,005 - MPMX26_02164 0.24 +1.1
2,220,062 - MPMX26_02164 0.30 +1.4
2,220,097 - MPMX26_02164 0.33 +1.0

Or see this region's nucleotide sequence