Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01733

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01731 and MPMX26_01732 are separated by 124 nucleotidesMPMX26_01732 and MPMX26_01733 are separated by 139 nucleotidesMPMX26_01733 and MPMX26_01734 are separated by 139 nucleotidesMPMX26_01734 and MPMX26_01735 overlap by 1 nucleotides MPMX26_01731: MPMX26_01731 - Fructose-bisphosphate aldolase, at 1,786,800 to 1,787,837 _01731 MPMX26_01732: MPMX26_01732 - hypothetical protein, at 1,787,962 to 1,788,258 _01732 MPMX26_01733: MPMX26_01733 - Phosphoglycerate kinase, at 1,788,398 to 1,789,585 _01733 MPMX26_01734: MPMX26_01734 - hypothetical protein, at 1,789,725 to 1,790,108 _01734 MPMX26_01735: MPMX26_01735 - 7-methyl-GTP pyrophosphatase, at 1,790,108 to 1,790,701 _01735 Position (kb) 1788 1789 1790Strain fitness (log2 ratio) -2 -1 0 1at 1787.977 kb on - strandat 1788.039 kb on - strand, within MPMX26_01732at 1788.039 kb on - strand, within MPMX26_01732at 1788.057 kb on - strand, within MPMX26_01732at 1788.240 kb on - strandat 1788.405 kb on - strandat 1788.405 kb on - strandat 1788.408 kb on - strandat 1788.424 kb on - strandat 1789.764 kb on + strand, within MPMX26_01734at 1789.770 kb on + strand, within MPMX26_01734at 1789.770 kb on + strand, within MPMX26_01734at 1789.770 kb on + strand, within MPMX26_01734at 1789.770 kb on + strand, within MPMX26_01734at 1789.787 kb on + strand, within MPMX26_01734at 1789.793 kb on + strand, within MPMX26_01734at 1789.848 kb on + strand, within MPMX26_01734at 1789.848 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.925 kb on + strand, within MPMX26_01734at 1789.973 kb on + strand, within MPMX26_01734at 1789.973 kb on + strand, within MPMX26_01734at 1789.994 kb on + strand, within MPMX26_01734at 1790.000 kb on + strand, within MPMX26_01734at 1790.000 kb on + strand, within MPMX26_01734at 1790.001 kb on + strand, within MPMX26_01734at 1790.001 kb on + strand, within MPMX26_01734at 1790.001 kb on + strand, within MPMX26_01734at 1790.001 kb on + strand, within MPMX26_01734at 1790.001 kb on + strand, within MPMX26_01734at 1790.015 kb on + strand, within MPMX26_01734at 1790.019 kb on + strand, within MPMX26_01734at 1790.061 kb on + strand, within MPMX26_01734at 1790.061 kb on + strand, within MPMX26_01734at 1790.061 kb on + strand, within MPMX26_01734at 1790.061 kb on + strand, within MPMX26_01734at 1790.093 kb on + strandat 1790.168 kb on + strand, within MPMX26_01735at 1790.215 kb on + strand, within MPMX26_01735at 1790.216 kb on + strand, within MPMX26_01735at 1790.243 kb on + strand, within MPMX26_01735at 1790.270 kb on + strand, within MPMX26_01735at 1790.303 kb on + strand, within MPMX26_01735at 1790.365 kb on + strand, within MPMX26_01735at 1790.365 kb on + strand, within MPMX26_01735at 1790.375 kb on + strand, within MPMX26_01735at 1790.387 kb on + strand, within MPMX26_01735at 1790.440 kb on + strand, within MPMX26_01735at 1790.528 kb on + strand, within MPMX26_01735at 1790.545 kb on + strand, within MPMX26_01735at 1790.552 kb on + strand, within MPMX26_01735at 1790.552 kb on + strand, within MPMX26_01735at 1790.552 kb on + strand, within MPMX26_01735at 1790.562 kb on + strand, within MPMX26_01735

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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1,787,977 - +0.2
1,788,039 - MPMX26_01732 0.26 +1.2
1,788,039 - MPMX26_01732 0.26 +0.3
1,788,057 - MPMX26_01732 0.32 -0.8
1,788,240 - -0.0
1,788,405 - -0.0
1,788,405 - +0.1
1,788,408 - +0.1
1,788,424 - -1.3
1,789,764 + MPMX26_01734 0.10 +0.1
1,789,770 + MPMX26_01734 0.12 +0.1
1,789,770 + MPMX26_01734 0.12 +0.1
1,789,770 + MPMX26_01734 0.12 -1.0
1,789,770 + MPMX26_01734 0.12 -0.5
1,789,787 + MPMX26_01734 0.16 -0.7
1,789,793 + MPMX26_01734 0.18 -0.3
1,789,848 + MPMX26_01734 0.32 -0.3
1,789,848 + MPMX26_01734 0.32 +0.6
1,789,925 + MPMX26_01734 0.52 -0.7
1,789,925 + MPMX26_01734 0.52 -0.9
1,789,925 + MPMX26_01734 0.52 -0.4
1,789,925 + MPMX26_01734 0.52 -0.6
1,789,925 + MPMX26_01734 0.52 +0.7
1,789,925 + MPMX26_01734 0.52 -0.4
1,789,925 + MPMX26_01734 0.52 -1.5
1,789,925 + MPMX26_01734 0.52 -0.4
1,789,925 + MPMX26_01734 0.52 -0.3
1,789,925 + MPMX26_01734 0.52 -0.4
1,789,925 + MPMX26_01734 0.52 -0.7
1,789,973 + MPMX26_01734 0.65 -0.0
1,789,973 + MPMX26_01734 0.65 -2.2
1,789,994 + MPMX26_01734 0.70 -0.3
1,790,000 + MPMX26_01734 0.72 -0.5
1,790,000 + MPMX26_01734 0.72 +0.2
1,790,001 + MPMX26_01734 0.72 -0.1
1,790,001 + MPMX26_01734 0.72 -0.4
1,790,001 + MPMX26_01734 0.72 -2.1
1,790,001 + MPMX26_01734 0.72 +1.4
1,790,001 + MPMX26_01734 0.72 +1.1
1,790,015 + MPMX26_01734 0.76 -0.3
1,790,019 + MPMX26_01734 0.77 -0.7
1,790,061 + MPMX26_01734 0.88 +0.0
1,790,061 + MPMX26_01734 0.88 -1.8
1,790,061 + MPMX26_01734 0.88 -0.1
1,790,061 + MPMX26_01734 0.88 -0.0
1,790,093 + -0.1
1,790,168 + MPMX26_01735 0.10 -0.3
1,790,215 + MPMX26_01735 0.18 -0.2
1,790,216 + MPMX26_01735 0.18 +0.8
1,790,243 + MPMX26_01735 0.23 +0.1
1,790,270 + MPMX26_01735 0.27 -0.9
1,790,303 + MPMX26_01735 0.33 -0.2
1,790,365 + MPMX26_01735 0.43 +1.2
1,790,365 + MPMX26_01735 0.43 -0.6
1,790,375 + MPMX26_01735 0.45 -1.3
1,790,387 + MPMX26_01735 0.47 +0.3
1,790,440 + MPMX26_01735 0.56 +1.1
1,790,528 + MPMX26_01735 0.71 -0.0
1,790,545 + MPMX26_01735 0.74 -0.3
1,790,552 + MPMX26_01735 0.75 -0.4
1,790,552 + MPMX26_01735 0.75 +0.2
1,790,552 + MPMX26_01735 0.75 -1.3
1,790,562 + MPMX26_01735 0.76 -0.1

Or see this region's nucleotide sequence