Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02801

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02800 and MPMX26_02801 are separated by 448 nucleotidesMPMX26_02801 and MPMX26_02802 are separated by 202 nucleotidesMPMX26_02802 and MPMX26_02803 are separated by 200 nucleotides MPMX26_02800: MPMX26_02800 - hypothetical protein, at 2,883,040 to 2,883,774 _02800 MPMX26_02801: MPMX26_02801 - hypothetical protein, at 2,884,223 to 2,884,570 _02801 MPMX26_02802: MPMX26_02802 - Fimbrial protein, at 2,884,773 to 2,885,294 _02802 MPMX26_02803: MPMX26_02803 - hypothetical protein, at 2,885,495 to 2,886,055 _02803 Position (kb) 2884 2885Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 2883.303 kb on - strand, within MPMX26_02800at 2883.303 kb on - strand, within MPMX26_02800at 2883.304 kb on - strand, within MPMX26_02800at 2883.304 kb on - strand, within MPMX26_02800at 2883.321 kb on - strand, within MPMX26_02800at 2883.432 kb on - strand, within MPMX26_02800at 2883.472 kb on - strand, within MPMX26_02800at 2883.517 kb on - strand, within MPMX26_02800at 2883.522 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.603 kb on - strand, within MPMX26_02800at 2883.613 kb on - strand, within MPMX26_02800at 2883.634 kb on - strand, within MPMX26_02800at 2883.848 kb on - strandat 2883.979 kb on - strandat 2884.002 kb on - strandat 2884.276 kb on - strand, within MPMX26_02801at 2884.345 kb on - strand, within MPMX26_02801at 2884.348 kb on - strand, within MPMX26_02801at 2884.544 kb on - strandat 2884.573 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.589 kb on - strandat 2884.625 kb on - strandat 2884.629 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.630 kb on - strandat 2884.645 kb on - strandat 2884.721 kb on - strandat 2884.750 kb on - strandat 2884.750 kb on - strandat 2884.750 kb on - strandat 2884.803 kb on - strandat 2884.812 kb on - strandat 2884.813 kb on - strandat 2884.814 kb on - strandat 2884.831 kb on - strand, within MPMX26_02802at 2884.831 kb on - strand, within MPMX26_02802at 2884.833 kb on - strand, within MPMX26_02802at 2884.838 kb on - strand, within MPMX26_02802at 2884.856 kb on - strand, within MPMX26_02802at 2884.873 kb on - strand, within MPMX26_02802at 2884.873 kb on - strand, within MPMX26_02802at 2884.873 kb on - strand, within MPMX26_02802at 2884.883 kb on - strand, within MPMX26_02802at 2884.883 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.929 kb on - strand, within MPMX26_02802at 2884.995 kb on - strand, within MPMX26_02802at 2885.083 kb on - strand, within MPMX26_02802at 2885.083 kb on - strand, within MPMX26_02802at 2885.083 kb on - strand, within MPMX26_02802at 2885.113 kb on - strand, within MPMX26_02802at 2885.164 kb on - strand, within MPMX26_02802at 2885.169 kb on - strand, within MPMX26_02802at 2885.202 kb on - strand, within MPMX26_02802at 2885.297 kb on - strandat 2885.514 kb on - strandat 2885.539 kb on - strandat 2885.546 kb on - strandat 2885.562 kb on - strand, within MPMX26_02803

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,883,303 - MPMX26_02800 0.36 +1.2
2,883,303 - MPMX26_02800 0.36 -0.3
2,883,304 - MPMX26_02800 0.36 +1.0
2,883,304 - MPMX26_02800 0.36 +0.1
2,883,321 - MPMX26_02800 0.38 +0.1
2,883,432 - MPMX26_02800 0.53 -0.2
2,883,472 - MPMX26_02800 0.59 -0.3
2,883,517 - MPMX26_02800 0.65 -0.0
2,883,522 - MPMX26_02800 0.66 +0.5
2,883,603 - MPMX26_02800 0.77 +0.5
2,883,603 - MPMX26_02800 0.77 -0.0
2,883,603 - MPMX26_02800 0.77 -0.7
2,883,613 - MPMX26_02800 0.78 +0.4
2,883,634 - MPMX26_02800 0.81 -0.7
2,883,848 - +0.9
2,883,979 - -1.8
2,884,002 - -0.5
2,884,276 - MPMX26_02801 0.15 +0.5
2,884,345 - MPMX26_02801 0.35 -0.2
2,884,348 - MPMX26_02801 0.36 +0.1
2,884,544 - -0.2
2,884,573 - +0.1
2,884,589 - -0.7
2,884,589 - -0.2
2,884,589 - -0.0
2,884,589 - -0.8
2,884,625 - -0.2
2,884,629 - -0.1
2,884,630 - +0.1
2,884,630 - -0.2
2,884,630 - -0.0
2,884,630 - -0.0
2,884,630 - -0.1
2,884,645 - -0.2
2,884,721 - +0.5
2,884,750 - -0.3
2,884,750 - +0.1
2,884,750 - -0.4
2,884,803 - +0.2
2,884,812 - -1.6
2,884,813 - -0.7
2,884,814 - -3.1
2,884,831 - MPMX26_02802 0.11 -0.4
2,884,831 - MPMX26_02802 0.11 -0.2
2,884,833 - MPMX26_02802 0.11 -2.3
2,884,838 - MPMX26_02802 0.12 -2.7
2,884,856 - MPMX26_02802 0.16 -4.0
2,884,873 - MPMX26_02802 0.19 -0.0
2,884,873 - MPMX26_02802 0.19 +0.0
2,884,873 - MPMX26_02802 0.19 +0.2
2,884,883 - MPMX26_02802 0.21 -3.3
2,884,883 - MPMX26_02802 0.21 -2.8
2,884,929 - MPMX26_02802 0.30 -1.4
2,884,929 - MPMX26_02802 0.30 -1.2
2,884,929 - MPMX26_02802 0.30 -1.1
2,884,929 - MPMX26_02802 0.30 -0.7
2,884,929 - MPMX26_02802 0.30 -0.9
2,884,929 - MPMX26_02802 0.30 -1.2
2,884,929 - MPMX26_02802 0.30 -1.2
2,884,929 - MPMX26_02802 0.30 -1.3
2,884,929 - MPMX26_02802 0.30 -1.1
2,884,929 - MPMX26_02802 0.30 -1.1
2,884,929 - MPMX26_02802 0.30 -1.7
2,884,995 - MPMX26_02802 0.43 -1.2
2,885,083 - MPMX26_02802 0.59 -0.1
2,885,083 - MPMX26_02802 0.59 -0.1
2,885,083 - MPMX26_02802 0.59 -0.2
2,885,113 - MPMX26_02802 0.65 -0.1
2,885,164 - MPMX26_02802 0.75 -0.2
2,885,169 - MPMX26_02802 0.76 +0.1
2,885,202 - MPMX26_02802 0.82 +0.6
2,885,297 - +0.3
2,885,514 - -0.5
2,885,539 - +0.5
2,885,546 - +1.1
2,885,562 - MPMX26_02803 0.12 -1.0

Or see this region's nucleotide sequence