Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02800 and MPMX26_02801 are separated by 448 nucleotides MPMX26_02801 and MPMX26_02802 are separated by 202 nucleotides MPMX26_02802 and MPMX26_02803 are separated by 200 nucleotides
MPMX26_02800: MPMX26_02800 - hypothetical protein, at 2,883,040 to 2,883,774
_02800
MPMX26_02801: MPMX26_02801 - hypothetical protein, at 2,884,223 to 2,884,570
_02801
MPMX26_02802: MPMX26_02802 - Fimbrial protein, at 2,884,773 to 2,885,294
_02802
MPMX26_02803: MPMX26_02803 - hypothetical protein, at 2,885,495 to 2,886,055
_02803
Position (kb)
2884
2885 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2883.303 kb on - strand, within MPMX26_02800 at 2883.303 kb on - strand, within MPMX26_02800 at 2883.304 kb on - strand, within MPMX26_02800 at 2883.304 kb on - strand, within MPMX26_02800 at 2883.321 kb on - strand, within MPMX26_02800 at 2883.432 kb on - strand, within MPMX26_02800 at 2883.472 kb on - strand, within MPMX26_02800 at 2883.517 kb on - strand, within MPMX26_02800 at 2883.522 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.603 kb on - strand, within MPMX26_02800 at 2883.613 kb on - strand, within MPMX26_02800 at 2883.634 kb on - strand, within MPMX26_02800 at 2883.848 kb on - strand at 2883.979 kb on - strand at 2884.002 kb on - strand at 2884.276 kb on - strand, within MPMX26_02801 at 2884.345 kb on - strand, within MPMX26_02801 at 2884.348 kb on - strand, within MPMX26_02801 at 2884.544 kb on - strand at 2884.573 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.625 kb on - strand at 2884.629 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.645 kb on - strand at 2884.721 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand at 2884.803 kb on - strand at 2884.812 kb on - strand at 2884.813 kb on - strand at 2884.814 kb on - strand at 2884.831 kb on - strand, within MPMX26_02802 at 2884.831 kb on - strand, within MPMX26_02802 at 2884.833 kb on - strand, within MPMX26_02802 at 2884.838 kb on - strand, within MPMX26_02802 at 2884.856 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.883 kb on - strand, within MPMX26_02802 at 2884.883 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.995 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.113 kb on - strand, within MPMX26_02802 at 2885.164 kb on - strand, within MPMX26_02802 at 2885.169 kb on - strand, within MPMX26_02802 at 2885.202 kb on - strand, within MPMX26_02802 at 2885.297 kb on - strand at 2885.514 kb on - strand at 2885.539 kb on - strand at 2885.546 kb on - strand at 2885.562 kb on - strand, within MPMX26_02803
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,883,303 - MPMX26_02800 0.36 +1.2 2,883,303 - MPMX26_02800 0.36 -0.3 2,883,304 - MPMX26_02800 0.36 +1.0 2,883,304 - MPMX26_02800 0.36 +0.1 2,883,321 - MPMX26_02800 0.38 +0.1 2,883,432 - MPMX26_02800 0.53 -0.2 2,883,472 - MPMX26_02800 0.59 -0.3 2,883,517 - MPMX26_02800 0.65 -0.0 2,883,522 - MPMX26_02800 0.66 +0.5 2,883,603 - MPMX26_02800 0.77 +0.5 2,883,603 - MPMX26_02800 0.77 -0.0 2,883,603 - MPMX26_02800 0.77 -0.7 2,883,613 - MPMX26_02800 0.78 +0.4 2,883,634 - MPMX26_02800 0.81 -0.7 2,883,848 - +0.9 2,883,979 - -1.8 2,884,002 - -0.5 2,884,276 - MPMX26_02801 0.15 +0.5 2,884,345 - MPMX26_02801 0.35 -0.2 2,884,348 - MPMX26_02801 0.36 +0.1 2,884,544 - -0.2 2,884,573 - +0.1 2,884,589 - -0.7 2,884,589 - -0.2 2,884,589 - -0.0 2,884,589 - -0.8 2,884,625 - -0.2 2,884,629 - -0.1 2,884,630 - +0.1 2,884,630 - -0.2 2,884,630 - -0.0 2,884,630 - -0.0 2,884,630 - -0.1 2,884,645 - -0.2 2,884,721 - +0.5 2,884,750 - -0.3 2,884,750 - +0.1 2,884,750 - -0.4 2,884,803 - +0.2 2,884,812 - -1.6 2,884,813 - -0.7 2,884,814 - -3.1 2,884,831 - MPMX26_02802 0.11 -0.4 2,884,831 - MPMX26_02802 0.11 -0.2 2,884,833 - MPMX26_02802 0.11 -2.3 2,884,838 - MPMX26_02802 0.12 -2.7 2,884,856 - MPMX26_02802 0.16 -4.0 2,884,873 - MPMX26_02802 0.19 -0.0 2,884,873 - MPMX26_02802 0.19 +0.0 2,884,873 - MPMX26_02802 0.19 +0.2 2,884,883 - MPMX26_02802 0.21 -3.3 2,884,883 - MPMX26_02802 0.21 -2.8 2,884,929 - MPMX26_02802 0.30 -1.4 2,884,929 - MPMX26_02802 0.30 -1.2 2,884,929 - MPMX26_02802 0.30 -1.1 2,884,929 - MPMX26_02802 0.30 -0.7 2,884,929 - MPMX26_02802 0.30 -0.9 2,884,929 - MPMX26_02802 0.30 -1.2 2,884,929 - MPMX26_02802 0.30 -1.2 2,884,929 - MPMX26_02802 0.30 -1.3 2,884,929 - MPMX26_02802 0.30 -1.1 2,884,929 - MPMX26_02802 0.30 -1.1 2,884,929 - MPMX26_02802 0.30 -1.7 2,884,995 - MPMX26_02802 0.43 -1.2 2,885,083 - MPMX26_02802 0.59 -0.1 2,885,083 - MPMX26_02802 0.59 -0.1 2,885,083 - MPMX26_02802 0.59 -0.2 2,885,113 - MPMX26_02802 0.65 -0.1 2,885,164 - MPMX26_02802 0.75 -0.2 2,885,169 - MPMX26_02802 0.76 +0.1 2,885,202 - MPMX26_02802 0.82 +0.6 2,885,297 - +0.3 2,885,514 - -0.5 2,885,539 - +0.5 2,885,546 - +1.1 2,885,562 - MPMX26_02803 0.12 -1.0
Or see this region's nucleotide sequence