Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00635

Experiment: L-Valine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00634 and MPMX26_00635 are separated by 226 nucleotidesMPMX26_00635 and MPMX26_00636 are separated by 298 nucleotidesMPMX26_00636 and MPMX26_00637 are separated by 42 nucleotides MPMX26_00634: MPMX26_00634 - 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase, at 675,896 to 677,581 _00634 MPMX26_00635: MPMX26_00635 - Peptide antibiotic transporter SbmA, at 677,808 to 679,007 _00635 MPMX26_00636: MPMX26_00636 - hypothetical protein, at 679,306 to 679,800 _00636 MPMX26_00637: MPMX26_00637 - Aromatic amino acid exporter YddG, at 679,843 to 680,778 _00637 Position (kb) 677 678 679 680Strain fitness (log2 ratio) -1 0 1at 676.965 kb on - strand, within MPMX26_00634at 677.752 kb on + strandat 677.947 kb on + strand, within MPMX26_00635at 677.952 kb on + strand, within MPMX26_00635at 677.965 kb on + strand, within MPMX26_00635at 678.024 kb on + strand, within MPMX26_00635at 678.395 kb on + strand, within MPMX26_00635at 678.548 kb on + strand, within MPMX26_00635at 678.585 kb on + strand, within MPMX26_00635at 678.812 kb on + strand, within MPMX26_00635at 678.903 kb on + strandat 679.596 kb on + strand, within MPMX26_00636

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Valine (N)
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676,965 - MPMX26_00634 0.63 +1.5
677,752 + -0.9
677,947 + MPMX26_00635 0.12 -0.6
677,952 + MPMX26_00635 0.12 -0.3
677,965 + MPMX26_00635 0.13 +0.1
678,024 + MPMX26_00635 0.18 +1.4
678,395 + MPMX26_00635 0.49 -0.6
678,548 + MPMX26_00635 0.62 +1.7
678,585 + MPMX26_00635 0.65 -0.6
678,812 + MPMX26_00635 0.84 +0.6
678,903 + +1.0
679,596 + MPMX26_00636 0.59 +0.4

Or see this region's nucleotide sequence