Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02800 and MPMX26_02801 are separated by 448 nucleotides MPMX26_02801 and MPMX26_02802 are separated by 202 nucleotides MPMX26_02802 and MPMX26_02803 are separated by 200 nucleotides MPMX26_02803 and MPMX26_02804 overlap by 7 nucleotides
MPMX26_02800: MPMX26_02800 - hypothetical protein, at 2,883,040 to 2,883,774
_02800
MPMX26_02801: MPMX26_02801 - hypothetical protein, at 2,884,223 to 2,884,570
_02801
MPMX26_02802: MPMX26_02802 - Fimbrial protein, at 2,884,773 to 2,885,294
_02802
MPMX26_02803: MPMX26_02803 - hypothetical protein, at 2,885,495 to 2,886,055
_02803
MPMX26_02804: MPMX26_02804 - hypothetical protein, at 2,886,049 to 2,887,113
_02804
Position (kb)
2884
2885
2886 Strain fitness (log2 ratio)
-1
0
1 at 2883.848 kb on - strand at 2883.979 kb on - strand at 2884.002 kb on - strand at 2884.276 kb on - strand, within MPMX26_02801 at 2884.345 kb on - strand, within MPMX26_02801 at 2884.348 kb on - strand, within MPMX26_02801 at 2884.544 kb on - strand at 2884.573 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.589 kb on - strand at 2884.625 kb on - strand at 2884.629 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.630 kb on - strand at 2884.645 kb on - strand at 2884.721 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand at 2884.750 kb on - strand at 2884.803 kb on - strand at 2884.812 kb on - strand at 2884.813 kb on - strand at 2884.814 kb on - strand at 2884.831 kb on - strand, within MPMX26_02802 at 2884.831 kb on - strand, within MPMX26_02802 at 2884.833 kb on - strand, within MPMX26_02802 at 2884.838 kb on - strand, within MPMX26_02802 at 2884.856 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.873 kb on - strand, within MPMX26_02802 at 2884.883 kb on - strand, within MPMX26_02802 at 2884.883 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.929 kb on - strand, within MPMX26_02802 at 2884.995 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.083 kb on - strand, within MPMX26_02802 at 2885.113 kb on - strand, within MPMX26_02802 at 2885.164 kb on - strand, within MPMX26_02802 at 2885.169 kb on - strand, within MPMX26_02802 at 2885.202 kb on - strand, within MPMX26_02802 at 2885.297 kb on - strand at 2885.514 kb on - strand at 2885.539 kb on - strand at 2885.546 kb on - strand at 2885.562 kb on - strand, within MPMX26_02803 at 2885.600 kb on - strand, within MPMX26_02803 at 2885.600 kb on - strand, within MPMX26_02803 at 2885.600 kb on - strand, within MPMX26_02803 at 2885.600 kb on - strand, within MPMX26_02803 at 2885.618 kb on - strand, within MPMX26_02803 at 2885.623 kb on - strand, within MPMX26_02803 at 2885.672 kb on - strand, within MPMX26_02803 at 2885.713 kb on - strand, within MPMX26_02803 at 2885.713 kb on - strand, within MPMX26_02803 at 2885.828 kb on - strand, within MPMX26_02803 at 2885.828 kb on - strand, within MPMX26_02803 at 2885.847 kb on - strand, within MPMX26_02803 at 2885.855 kb on - strand, within MPMX26_02803 at 2885.855 kb on - strand, within MPMX26_02803 at 2885.976 kb on - strand, within MPMX26_02803 at 2885.976 kb on - strand, within MPMX26_02803 at 2886.029 kb on - strand at 2886.096 kb on - strand at 2886.144 kb on - strand at 2886.240 kb on - strand, within MPMX26_02804 at 2886.240 kb on - strand, within MPMX26_02804 at 2886.240 kb on - strand, within MPMX26_02804 at 2886.253 kb on - strand, within MPMX26_02804 at 2886.253 kb on - strand, within MPMX26_02804 at 2886.258 kb on - strand, within MPMX26_02804 at 2886.265 kb on - strand, within MPMX26_02804 at 2886.279 kb on - strand, within MPMX26_02804
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,883,848 - +1.2 2,883,979 - +0.3 2,884,002 - +0.1 2,884,276 - MPMX26_02801 0.15 +0.4 2,884,345 - MPMX26_02801 0.35 +0.2 2,884,348 - MPMX26_02801 0.36 -0.1 2,884,544 - +0.1 2,884,573 - +0.7 2,884,589 - +1.0 2,884,589 - +0.7 2,884,589 - -0.1 2,884,589 - -0.4 2,884,625 - +0.4 2,884,629 - -0.1 2,884,630 - +0.2 2,884,630 - -0.4 2,884,630 - -0.1 2,884,630 - +0.1 2,884,630 - +0.6 2,884,645 - -0.6 2,884,721 - -0.9 2,884,750 - -0.5 2,884,750 - +0.1 2,884,750 - -0.5 2,884,803 - -0.3 2,884,812 - -0.3 2,884,813 - -0.3 2,884,814 - +0.4 2,884,831 - MPMX26_02802 0.11 -0.4 2,884,831 - MPMX26_02802 0.11 -0.1 2,884,833 - MPMX26_02802 0.11 -0.8 2,884,838 - MPMX26_02802 0.12 +0.3 2,884,856 - MPMX26_02802 0.16 -0.4 2,884,873 - MPMX26_02802 0.19 -0.1 2,884,873 - MPMX26_02802 0.19 -0.1 2,884,873 - MPMX26_02802 0.19 +0.3 2,884,883 - MPMX26_02802 0.21 -0.4 2,884,883 - MPMX26_02802 0.21 +0.7 2,884,929 - MPMX26_02802 0.30 -0.8 2,884,929 - MPMX26_02802 0.30 -0.5 2,884,929 - MPMX26_02802 0.30 -0.5 2,884,929 - MPMX26_02802 0.30 -0.3 2,884,929 - MPMX26_02802 0.30 -0.8 2,884,929 - MPMX26_02802 0.30 -0.0 2,884,929 - MPMX26_02802 0.30 -0.6 2,884,929 - MPMX26_02802 0.30 -0.4 2,884,929 - MPMX26_02802 0.30 -0.7 2,884,929 - MPMX26_02802 0.30 -0.9 2,884,929 - MPMX26_02802 0.30 -0.6 2,884,995 - MPMX26_02802 0.43 -0.4 2,885,083 - MPMX26_02802 0.59 -0.8 2,885,083 - MPMX26_02802 0.59 -0.3 2,885,083 - MPMX26_02802 0.59 -0.2 2,885,113 - MPMX26_02802 0.65 -0.4 2,885,164 - MPMX26_02802 0.75 -0.3 2,885,169 - MPMX26_02802 0.76 -0.2 2,885,202 - MPMX26_02802 0.82 +0.9 2,885,297 - -0.2 2,885,514 - +0.2 2,885,539 - +0.1 2,885,546 - +0.0 2,885,562 - MPMX26_02803 0.12 -1.7 2,885,600 - MPMX26_02803 0.19 +0.4 2,885,600 - MPMX26_02803 0.19 -0.1 2,885,600 - MPMX26_02803 0.19 +0.6 2,885,600 - MPMX26_02803 0.19 -0.3 2,885,618 - MPMX26_02803 0.22 -0.5 2,885,623 - MPMX26_02803 0.23 -0.2 2,885,672 - MPMX26_02803 0.32 -0.2 2,885,713 - MPMX26_02803 0.39 +0.5 2,885,713 - MPMX26_02803 0.39 -0.2 2,885,828 - MPMX26_02803 0.59 -0.2 2,885,828 - MPMX26_02803 0.59 +0.4 2,885,847 - MPMX26_02803 0.63 -1.5 2,885,855 - MPMX26_02803 0.64 -0.3 2,885,855 - MPMX26_02803 0.64 -0.3 2,885,976 - MPMX26_02803 0.86 +0.1 2,885,976 - MPMX26_02803 0.86 +0.1 2,886,029 - -1.6 2,886,096 - -0.5 2,886,144 - +0.5 2,886,240 - MPMX26_02804 0.18 -0.6 2,886,240 - MPMX26_02804 0.18 -1.0 2,886,240 - MPMX26_02804 0.18 +0.2 2,886,253 - MPMX26_02804 0.19 +0.4 2,886,253 - MPMX26_02804 0.19 -0.0 2,886,258 - MPMX26_02804 0.20 -0.3 2,886,265 - MPMX26_02804 0.20 +0.7 2,886,279 - MPMX26_02804 0.22 +0.1
Or see this region's nucleotide sequence