Strain Fitness in Pseudomonas sp. SVBP6 around COO64_RS21000

Experiment: Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Pseudomonas DC3000 grown in LB; 0.1 X
106,327	+		COO64_RS20995	0.42	-0.0
106,327	+		COO64_RS20995	0.42	+0.1
106,327	+		COO64_RS20995	0.42	+1.1
106,327	+		COO64_RS20995	0.42	+0.1
106,766	+		COO64_RS20995	0.70	-0.7
106,766	+		COO64_RS20995	0.70	-0.2
106,766	+		COO64_RS20995	0.70	+0.4
106,766	+		COO64_RS20995	0.70	+1.6
106,767	-		COO64_RS20995	0.70	+0.1
106,767	-		COO64_RS20995	0.70	-1.5
107,146	+				-2.0
107,147	-				-0.2
107,147	-				-1.9
107,147	-				-0.6
107,197	+				-0.1
107,197	+				+0.1
107,198	-				+0.9
107,198	-				-0.5
107,264	+				+0.6
107,264	+				-1.2
107,264	+				+0.3
107,264	+				-0.9
107,264	+				+0.6
107,264	+				+1.5
107,264	+				-1.1
107,266	+				-0.5
107,266	+				+0.8
107,266	+				+0.9
107,266	+				-0.9
107,267	-				+0.8
107,267	-				+0.3
107,267	-				-0.4
107,372	+				+0.0
107,660	-		COO64_RS21000	0.19	-0.6
107,672	+		COO64_RS21000	0.20	-0.6
108,162	-		COO64_RS21000	0.43	-0.4
108,162	-		COO64_RS21000	0.43	+1.0
108,338	+		COO64_RS21000	0.51	-0.3
108,339	-		COO64_RS21000	0.51	-1.6
108,339	-		COO64_RS21000	0.51	-0.9
108,416	+		COO64_RS21000	0.55	+0.2
108,417	-		COO64_RS21000	0.55	+0.8
108,417	-		COO64_RS21000	0.55	-0.0
108,824	+		COO64_RS21000	0.75	-1.5
108,824	+		COO64_RS21000	0.75	+1.1
108,824	+		COO64_RS21000	0.75	+0.4
108,825	-		COO64_RS21000	0.75	-0.5
108,825	-		COO64_RS21000	0.75	-1.0
108,825	-		COO64_RS21000	0.75	-0.9
108,863	+		COO64_RS21000	0.77	+0.0
108,864	-		COO64_RS21000	0.77	-0.7
108,957	-		COO64_RS21000	0.81	+0.5
108,971	+		COO64_RS21000	0.82	+0.1
108,971	+		COO64_RS21000	0.82	-0.1
108,972	-		COO64_RS21000	0.82	-1.7
109,071	-		COO64_RS21000	0.86	+0.2
109,147	-				+0.1
109,151	-				+1.4
109,508	-		COO64_RS21005	0.12	-1.1
109,687	+		COO64_RS21005	0.27	+0.3
109,687	+		COO64_RS21005	0.27	+0.6
109,687	+		COO64_RS21005	0.27	-0.2
109,687	+		COO64_RS21005	0.27	-0.7
109,688	-		COO64_RS21005	0.28	-0.3
109,900	+		COO64_RS21005	0.46	-1.0
110,008	+		COO64_RS21005	0.55	+0.7
110,008	+		COO64_RS21005	0.55	-0.3
110,008	+		COO64_RS21005	0.55	-0.7
110,321	-		COO64_RS21005	0.82	-0.1
110,321	-		COO64_RS21005	0.82	-0.5