Strain Fitness in Escherichia fergusonii Becca around EFB2_01600

Experiment: BHIS_CaCl2 no phage control with 14 member community

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS_CaCl2 no phage control with 14 member community
1,673,541	+		EFB2_01599	0.40	+0.3
1,673,541	+		EFB2_01599	0.40	+0.9
1,673,542	-		EFB2_01599	0.40	+0.4
1,673,542	-		EFB2_01599	0.40	+0.8
1,673,542	-		EFB2_01599	0.40	-0.5
1,673,542	-		EFB2_01599	0.40	-0.4
1,673,542	-		EFB2_01599	0.40	+0.4
1,673,542	-		EFB2_01599	0.40	-2.0
1,673,542	-		EFB2_01599	0.40	-2.1
1,673,542	-		EFB2_01599	0.40	+2.3
1,673,542	-		EFB2_01599	0.40	-0.7
1,673,584	+		EFB2_01599	0.43	-0.1
1,673,584	+		EFB2_01599	0.43	-0.4
1,673,584	+		EFB2_01599	0.43	-1.8
1,673,584	+		EFB2_01599	0.43	+0.6
1,673,585	-		EFB2_01599	0.43	-2.7
1,673,585	-		EFB2_01599	0.43	-0.4
1,673,585	-		EFB2_01599	0.43	+0.8
1,673,585	-		EFB2_01599	0.43	-0.0
1,673,585	-		EFB2_01599	0.43	-2.9
1,673,586	+		EFB2_01599	0.43	+0.7
1,673,586	+		EFB2_01599	0.43	+0.3
1,673,586	+		EFB2_01599	0.43	+1.0
1,673,586	+		EFB2_01599	0.43	-0.6
1,673,586	+		EFB2_01599	0.43	+1.3
1,673,586	+		EFB2_01599	0.43	+0.6
1,673,586	+		EFB2_01599	0.43	+0.8
1,673,586	+		EFB2_01599	0.43	-0.3
1,673,586	+		EFB2_01599	0.43	-3.6
1,673,586	+		EFB2_01599	0.43	-0.2
1,673,586	+		EFB2_01599	0.43	-1.3
1,673,586	+		EFB2_01599	0.43	-0.6
1,673,586	+		EFB2_01599	0.43	-0.6
1,673,586	+		EFB2_01599	0.43	-2.4
1,673,586	+		EFB2_01599	0.43	-1.1
1,673,586	+		EFB2_01599	0.43	-1.9
1,673,586	+		EFB2_01599	0.43	-0.8
1,673,586	+		EFB2_01599	0.43	-1.3
1,673,586	+		EFB2_01599	0.43	-1.3
1,673,586	+		EFB2_01599	0.43	-0.4
1,673,586	+		EFB2_01599	0.43	-0.7
1,673,586	+		EFB2_01599	0.43	-2.8
1,673,586	+		EFB2_01599	0.43	-0.4
1,673,586	+		EFB2_01599	0.43	+1.5
1,673,586	+		EFB2_01599	0.43	-0.4
1,673,586	+		EFB2_01599	0.43	+1.9
1,673,586	+		EFB2_01599	0.43	-1.4
1,673,586	+		EFB2_01599	0.43	-1.6
1,673,586	+		EFB2_01599	0.43	+0.3
1,673,586	+		EFB2_01599	0.43	-0.5
1,673,586	+		EFB2_01599	0.43	-1.0
1,673,586	+		EFB2_01599	0.43	+0.6
1,673,586	+		EFB2_01599	0.43	-1.6
1,673,586	+		EFB2_01599	0.43	+0.6
1,673,587	-		EFB2_01599	0.43	-1.8
1,673,587	-		EFB2_01599	0.43	-0.6
1,673,587	-		EFB2_01599	0.43	+2.0
1,673,587	-		EFB2_01599	0.43	+3.4
1,673,587	-		EFB2_01599	0.43	+0.9
1,673,587	-		EFB2_01599	0.43	-2.8
1,673,587	-		EFB2_01599	0.43	+0.3
1,673,587	-		EFB2_01599	0.43	-0.3
1,673,587	-		EFB2_01599	0.43	+0.4
1,673,587	-		EFB2_01599	0.43	+0.1
1,673,587	-		EFB2_01599	0.43	+3.3
1,673,587	-		EFB2_01599	0.43	+1.9
1,673,587	-		EFB2_01599	0.43	-1.1
1,673,587	-		EFB2_01599	0.43	+0.7
1,673,587	-		EFB2_01599	0.43	-1.4
1,673,587	-		EFB2_01599	0.43	-0.3
1,673,587	-		EFB2_01599	0.43	-1.0
1,673,587	-		EFB2_01599	0.43	+0.7
1,673,587	-		EFB2_01599	0.43	-1.8
1,673,587	-		EFB2_01599	0.43	+0.4
1,673,587	-		EFB2_01599	0.43	-0.1
1,673,587	-		EFB2_01599	0.43	-1.4
1,673,587	-		EFB2_01599	0.43	+0.4
1,673,587	-		EFB2_01599	0.43	+1.0
1,673,587	-		EFB2_01599	0.43	-0.7
1,673,587	-		EFB2_01599	0.43	-3.1
1,673,587	-		EFB2_01599	0.43	-2.1
1,673,587	-		EFB2_01599	0.43	-1.0
1,673,587	-		EFB2_01599	0.43	-0.3
1,673,653	-		EFB2_01599	0.47	-1.3
1,673,691	+		EFB2_01599	0.49	+0.1
1,673,691	+		EFB2_01599	0.49	-0.2
1,673,691	+		EFB2_01599	0.49	-1.1
1,673,691	+		EFB2_01599	0.49	+0.4
1,673,691	+		EFB2_01599	0.49	-1.6
1,673,691	+		EFB2_01599	0.49	-1.2
1,673,691	+		EFB2_01599	0.49	-0.7
1,673,691	+		EFB2_01599	0.49	+0.9
1,673,691	+		EFB2_01599	0.49	+0.1
1,673,691	+		EFB2_01599	0.49	-0.6
1,673,691	+		EFB2_01599	0.49	+1.3
1,673,691	+		EFB2_01599	0.49	-0.1
1,673,691	+		EFB2_01599	0.49	+0.4
1,673,692	-		EFB2_01599	0.49	+0.6
1,673,692	-		EFB2_01599	0.49	-0.1
1,673,692	-		EFB2_01599	0.49	-0.2
1,673,692	-		EFB2_01599	0.49	-0.8
1,673,692	-		EFB2_01599	0.49	-0.4
1,673,692	-		EFB2_01599	0.49	+0.9
1,673,692	-		EFB2_01599	0.49	-1.6
1,673,708	+		EFB2_01599	0.50	+0.6
1,673,709	-		EFB2_01599	0.50	-0.3
1,673,751	+		EFB2_01599	0.53	+0.8
1,673,751	+		EFB2_01599	0.53	+0.4
1,673,751	+		EFB2_01599	0.53	+1.0
1,673,751	+		EFB2_01599	0.53	-1.1
1,673,751	+		EFB2_01599	0.53	-0.2
1,673,751	+		EFB2_01599	0.53	+0.4
1,673,751	+		EFB2_01599	0.53	+0.1
1,673,751	+		EFB2_01599	0.53	+0.6
1,673,751	+		EFB2_01599	0.53	+0.1
1,673,752	-		EFB2_01599	0.53	+0.6
1,673,752	-		EFB2_01599	0.53	-0.8
1,673,752	-		EFB2_01599	0.53	+0.2
1,673,752	-		EFB2_01599	0.53	+0.6
1,673,752	-		EFB2_01599	0.53	+2.0
1,673,754	+		EFB2_01599	0.53	+3.9
1,673,754	+		EFB2_01599	0.53	-0.4
1,673,754	+		EFB2_01599	0.53	+0.9
1,673,754	+		EFB2_01599	0.53	-1.4
1,673,754	+		EFB2_01599	0.53	-0.6
1,673,755	-		EFB2_01599	0.53	-0.4
1,673,770	+		EFB2_01599	0.54	+0.7
1,673,770	+		EFB2_01599	0.54	-0.1
1,673,770	+		EFB2_01599	0.54	+0.3
1,673,770	+		EFB2_01599	0.54	+0.1
1,673,770	+		EFB2_01599	0.54	-1.4
1,673,770	+		EFB2_01599	0.54	-2.6
1,673,770	+		EFB2_01599	0.54	+1.0
1,673,770	+		EFB2_01599	0.54	-0.7
1,673,770	+		EFB2_01599	0.54	-0.6
1,673,770	+		EFB2_01599	0.54	-1.5
1,673,770	+		EFB2_01599	0.54	+2.0
1,673,770	+		EFB2_01599	0.54	-0.4
1,673,770	+		EFB2_01599	0.54	-0.1
1,673,771	-		EFB2_01599	0.54	-1.0
1,673,771	-		EFB2_01599	0.54	+2.6
1,673,771	-		EFB2_01599	0.54	+0.5
1,673,771	-		EFB2_01599	0.54	+1.4
1,673,771	-		EFB2_01599	0.54	+0.9
1,673,771	-		EFB2_01599	0.54	-1.3
1,673,771	-		EFB2_01599	0.54	-0.1
1,673,803	+		EFB2_01599	0.56	-1.4
1,673,804	-		EFB2_01599	0.56	-0.6
1,673,804	-		EFB2_01599	0.56	-0.3
1,673,824	-		EFB2_01599	0.57	+0.4
1,673,910	+		EFB2_01599	0.62	+1.5
1,673,911	-		EFB2_01599	0.63	-1.5
1,673,911	-		EFB2_01599	0.63	+1.7
1,673,914	+		EFB2_01599	0.63	-2.1
1,673,914	+		EFB2_01599	0.63	-1.5
1,673,914	+		EFB2_01599	0.63	-2.5
1,673,914	+		EFB2_01599	0.63	-1.2
1,673,915	-		EFB2_01599	0.63	+0.1
1,673,915	-		EFB2_01599	0.63	-1.4
1,673,945	+		EFB2_01599	0.65	-0.0
1,673,946	-		EFB2_01599	0.65	+0.5
1,673,946	-		EFB2_01599	0.65	-0.7
1,673,964	-		EFB2_01599	0.66	-1.3
1,674,118	+		EFB2_01599	0.75	-0.6
1,674,138	+		EFB2_01599	0.76	+3.3
1,674,138	+		EFB2_01599	0.76	-0.2
1,674,138	+		EFB2_01599	0.76	+0.8
1,674,138	+		EFB2_01599	0.76	-1.1
1,674,138	+		EFB2_01599	0.76	-1.5
1,674,138	+		EFB2_01599	0.76	-0.3
1,674,138	+		EFB2_01599	0.76	+1.5
1,674,138	+		EFB2_01599	0.76	+0.3
1,674,138	+		EFB2_01599	0.76	+0.1
1,674,138	+		EFB2_01599	0.76	-2.0
1,674,139	-		EFB2_01599	0.76	-3.2
1,674,139	-		EFB2_01599	0.76	+0.9
1,674,139	-		EFB2_01599	0.76	+2.4
1,674,139	-		EFB2_01599	0.76	-0.6
1,674,139	-		EFB2_01599	0.76	-2.4
1,674,139	-		EFB2_01599	0.76	-1.4
1,674,139	-		EFB2_01599	0.76	+1.1
1,674,153	+		EFB2_01599	0.77	+0.0
1,674,153	+		EFB2_01599	0.77	-2.1
1,674,154	-		EFB2_01599	0.77	-2.4
1,674,154	-		EFB2_01599	0.77	+0.4
1,674,154	-		EFB2_01599	0.77	+0.4
1,674,154	-		EFB2_01599	0.77	-2.6
1,674,154	-		EFB2_01599	0.77	-0.1
1,674,154	-		EFB2_01599	0.77	+0.9
1,674,160	+		EFB2_01599	0.78	-2.4
1,674,161	-		EFB2_01599	0.78	-2.7
1,674,161	-		EFB2_01599	0.78	+0.3
1,674,161	-		EFB2_01599	0.78	-2.8
1,674,161	-		EFB2_01599	0.78	+0.9
1,674,161	-		EFB2_01599	0.78	+2.4
1,674,161	-		EFB2_01599	0.78	+0.6
1,674,174	+		EFB2_01599	0.78	+2.0
1,674,174	+		EFB2_01599	0.78	-2.1
1,674,180	-		EFB2_01599	0.79	+0.4
1,674,180	-		EFB2_01599	0.79	-0.8
1,674,215	+		EFB2_01599	0.81	-0.5
1,674,215	+		EFB2_01599	0.81	+4.6
1,674,215	+		EFB2_01599	0.81	+0.0
1,674,216	-		EFB2_01599	0.81	-2.7
1,674,226	+		EFB2_01599	0.82	+0.4
1,674,226	+		EFB2_01599	0.82	+0.8
1,674,227	-		EFB2_01599	0.82	+2.3
1,674,227	-		EFB2_01599	0.82	+1.9
1,674,251	+		EFB2_01599	0.83	+2.2
1,674,251	+		EFB2_01599	0.83	+1.4
1,674,251	+		EFB2_01599	0.83	-1.6
1,674,251	+		EFB2_01599	0.83	-2.7
1,674,252	-		EFB2_01599	0.83	+1.7
1,674,269	-		EFB2_01599	0.84	-1.6
1,674,269	-		EFB2_01599	0.84	-0.7
1,674,293	-		EFB2_01599	0.86	+1.7
1,674,293	-		EFB2_01599	0.86	-2.1
1,674,305	+		EFB2_01599	0.86	+0.1
1,674,305	+		EFB2_01599	0.86	-0.3
1,674,305	+		EFB2_01599	0.86	-1.0
1,674,305	+		EFB2_01599	0.86	+1.2
1,674,305	+		EFB2_01599	0.86	-0.9
1,674,305	+		EFB2_01599	0.86	+1.5
1,674,305	+		EFB2_01599	0.86	+1.5
1,674,305	+		EFB2_01599	0.86	-1.7
1,674,306	-		EFB2_01599	0.86	-0.4
1,674,306	-		EFB2_01599	0.86	+1.6
1,674,306	-		EFB2_01599	0.86	+0.4
1,674,306	-		EFB2_01599	0.86	-1.8
1,674,306	-		EFB2_01599	0.86	-1.6
1,674,325	+		EFB2_01599	0.88	+0.3
1,674,326	-		EFB2_01599	0.88	-2.4
1,674,326	-		EFB2_01599	0.88	-0.4
1,674,326	-		EFB2_01599	0.88	+1.2
1,674,326	-		EFB2_01599	0.88	+0.2
1,674,357	+		EFB2_01599	0.90	-0.1
1,674,357	+		EFB2_01599	0.90	+0.7
1,674,357	+		EFB2_01599	0.90	+0.0
1,674,358	-		EFB2_01599	0.90	+0.8
1,674,362	+		EFB2_01599	0.90	-0.3
1,674,362	+		EFB2_01599	0.90	+0.4
1,674,363	-		EFB2_01599	0.90	+0.4
1,674,363	-		EFB2_01599	0.90	-1.1
1,674,363	-		EFB2_01599	0.90	+0.4
1,674,363	-		EFB2_01599	0.90	-0.8
1,674,471	-				-1.3
1,674,477	+				+1.9
1,674,477	+				+1.3
1,674,477	+				+0.0
1,674,477	+				-1.7
1,674,477	+				+0.0
1,674,477	+				+0.7
1,674,477	+				-0.4
1,674,477	+				-0.1
1,674,477	+				-0.8
1,674,477	+				-0.5
1,674,478	-				-1.1
1,674,478	-				-1.1
1,674,478	-				-0.6
1,674,478	-				-0.4
1,674,478	-				-1.0
1,674,480	+				-1.1
1,674,480	+				+0.8
1,674,480	+				+1.0
1,674,480	+				-2.8
1,674,480	+				+0.9
1,674,480	+				+0.4
1,674,480	+				+1.4
1,674,480	+				+1.0
1,674,480	+				-1.6
1,674,481	-				+0.4
1,674,481	-				-0.3
1,674,481	-				-1.1
1,674,481	-				-2.9
1,674,481	-				-0.8
1,674,481	-				+0.8
1,674,481	-				-0.6
1,674,481	-				-3.0
1,674,481	-				-1.6
1,674,490	+				+0.3
1,674,490	+				+0.8
1,674,490	+				+0.2
1,674,490	+				+0.7
1,674,491	-				-3.5
1,674,491	-				+0.6
1,674,491	-				-2.0
1,674,491	-				-0.8
1,674,491	-				+0.6
1,674,513	+				+0.2
1,674,513	+				-1.5
1,674,513	+				+1.3
1,674,514	-				+1.0
1,674,514	-				+4.0
1,674,514	-				-2.1
1,674,514	-				-2.0
1,674,514	-				-0.7
1,674,519	-				-2.6
1,674,519	-				-0.4
1,674,582	+				-2.1
1,674,583	-				+0.7
1,674,623	-		EFB2_01600	0.11	+0.8
1,674,625	+		EFB2_01600	0.11	-0.3
1,674,625	+		EFB2_01600	0.11	+0.2
1,674,625	+		EFB2_01600	0.11	+0.3
1,674,625	+		EFB2_01600	0.11	+1.4
1,674,625	+		EFB2_01600	0.11	+1.1
1,674,625	+		EFB2_01600	0.11	+1.3
1,674,625	+		EFB2_01600	0.11	+0.8
1,674,625	+		EFB2_01600	0.11	-0.9
1,674,625	+		EFB2_01600	0.11	-0.2
1,674,625	+		EFB2_01600	0.11	-0.2
1,674,625	+		EFB2_01600	0.11	+2.5
1,674,626	-		EFB2_01600	0.11	+0.8
1,674,626	-		EFB2_01600	0.11	-0.3
1,674,626	-		EFB2_01600	0.11	+2.0
1,674,626	-		EFB2_01600	0.11	-1.2
1,674,626	-		EFB2_01600	0.11	+1.4
1,674,626	-		EFB2_01600	0.11	-0.8
1,674,626	-		EFB2_01600	0.11	+1.2
1,674,626	-		EFB2_01600	0.11	-0.4
1,674,626	-		EFB2_01600	0.11	-1.0
1,674,626	-		EFB2_01600	0.11	+0.6
1,674,626	-		EFB2_01600	0.11	-2.6
1,674,626	-		EFB2_01600	0.11	-2.8
1,674,626	-		EFB2_01600	0.11	-0.1
1,674,626	-		EFB2_01600	0.11	+2.6
1,674,626	-		EFB2_01600	0.11	+2.6
1,674,626	-		EFB2_01600	0.11	+0.0
1,674,626	-		EFB2_01600	0.11	+0.6
1,674,626	-		EFB2_01600	0.11	+0.4
1,674,634	+		EFB2_01600	0.12	-1.2
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