Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00754

Experiment: L-Glutamine (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_00753 and MPMX26_00754 are separated by 169 nucleotidesMPMX26_00754 and MPMX26_00755 are separated by 12 nucleotides MPMX26_00753: MPMX26_00753 - Dihydrolipoyl dehydrogenase, at 792,734 to 794,167 _00753 MPMX26_00754: MPMX26_00754 - Succinate--CoA ligase [ADP-forming] subunit beta, at 794,337 to 795,503 _00754 MPMX26_00755: MPMX26_00755 - Succinate--CoA ligase [ADP-forming] subunit alpha, at 795,516 to 796,406 _00755 Position (kb) 794 795 796Strain fitness (log2 ratio) -1 0 1 2 3 4 5at 794.168 kb on + strandat 794.174 kb on + strandat 794.184 kb on + strandat 794.198 kb on + strandat 794.212 kb on + strandat 794.222 kb on + strandat 794.222 kb on + strandat 794.222 kb on + strandat 794.421 kb on + strandat 794.475 kb on + strand, within MPMX26_00754at 794.504 kb on + strand, within MPMX26_00754at 794.504 kb on + strand, within MPMX26_00754at 794.511 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.547 kb on + strand, within MPMX26_00754at 794.585 kb on + strand, within MPMX26_00754at 794.612 kb on + strand, within MPMX26_00754at 794.613 kb on + strand, within MPMX26_00754at 794.613 kb on + strand, within MPMX26_00754at 794.622 kb on + strand, within MPMX26_00754at 794.627 kb on + strand, within MPMX26_00754at 794.627 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.639 kb on + strand, within MPMX26_00754at 794.676 kb on + strand, within MPMX26_00754at 794.830 kb on + strand, within MPMX26_00754at 794.876 kb on + strand, within MPMX26_00754at 794.876 kb on + strand, within MPMX26_00754at 794.882 kb on + strand, within MPMX26_00754at 794.888 kb on + strand, within MPMX26_00754at 794.888 kb on + strand, within MPMX26_00754at 794.977 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.006 kb on + strand, within MPMX26_00754at 795.008 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.023 kb on + strand, within MPMX26_00754at 795.089 kb on + strand, within MPMX26_00754at 795.089 kb on + strand, within MPMX26_00754at 795.093 kb on + strand, within MPMX26_00754at 795.094 kb on + strand, within MPMX26_00754at 795.094 kb on + strand, within MPMX26_00754at 795.153 kb on + strand, within MPMX26_00754at 795.200 kb on + strand, within MPMX26_00754at 795.202 kb on + strand, within MPMX26_00754at 795.265 kb on + strand, within MPMX26_00754at 795.279 kb on + strand, within MPMX26_00754at 795.279 kb on + strand, within MPMX26_00754at 795.281 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.301 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.303 kb on + strand, within MPMX26_00754at 795.414 kb on + strandat 795.450 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.455 kb on + strandat 795.457 kb on + strandat 795.520 kb on + strandat 795.546 kb on + strandat 795.552 kb on + strandat 795.557 kb on + strandat 795.557 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.591 kb on + strandat 795.595 kb on + strandat 795.600 kb on + strandat 795.628 kb on + strand, within MPMX26_00755at 795.638 kb on + strand, within MPMX26_00755at 795.638 kb on + strand, within MPMX26_00755at 795.648 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.674 kb on + strand, within MPMX26_00755at 795.691 kb on + strand, within MPMX26_00755at 795.704 kb on + strand, within MPMX26_00755at 795.710 kb on + strand, within MPMX26_00755at 795.810 kb on + strand, within MPMX26_00755at 795.820 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.830 kb on + strand, within MPMX26_00755at 795.873 kb on + strand, within MPMX26_00755at 795.882 kb on + strand, within MPMX26_00755at 795.882 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.892 kb on + strand, within MPMX26_00755at 795.897 kb on + strand, within MPMX26_00755at 795.901 kb on + strand, within MPMX26_00755at 795.901 kb on + strand, within MPMX26_00755at 795.994 kb on + strand, within MPMX26_00755at 796.026 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.045 kb on + strand, within MPMX26_00755at 796.103 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.115 kb on + strand, within MPMX26_00755at 796.152 kb on + strand, within MPMX26_00755at 796.176 kb on + strand, within MPMX26_00755at 796.204 kb on + strand, within MPMX26_00755at 796.209 kb on + strand, within MPMX26_00755at 796.236 kb on + strand, within MPMX26_00755at 796.244 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.251 kb on + strand, within MPMX26_00755at 796.346 kb on + strandat 796.366 kb on + strandat 796.394 kb on + strandat 796.395 kb on + strandat 796.395 kb on + strandat 796.400 kb on + strandat 796.400 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
remove
794,168 + +0.8
794,174 + +0.3
794,184 + -0.7
794,198 + -0.2
794,212 + -0.1
794,222 + +2.6
794,222 + +1.2
794,222 + +2.1
794,421 + +2.3
794,475 + MPMX26_00754 0.12 +2.4
794,504 + MPMX26_00754 0.14 +2.2
794,504 + MPMX26_00754 0.14 +3.0
794,511 + MPMX26_00754 0.15 +2.8
794,547 + MPMX26_00754 0.18 +3.1
794,547 + MPMX26_00754 0.18 +2.9
794,547 + MPMX26_00754 0.18 +2.4
794,547 + MPMX26_00754 0.18 +1.4
794,547 + MPMX26_00754 0.18 +2.5
794,547 + MPMX26_00754 0.18 +3.2
794,585 + MPMX26_00754 0.21 +2.8
794,612 + MPMX26_00754 0.24 +1.6
794,613 + MPMX26_00754 0.24 +2.9
794,613 + MPMX26_00754 0.24 +2.6
794,622 + MPMX26_00754 0.24 +2.7
794,627 + MPMX26_00754 0.25 +2.8
794,627 + MPMX26_00754 0.25 +2.7
794,639 + MPMX26_00754 0.26 +2.6
794,639 + MPMX26_00754 0.26 +3.8
794,639 + MPMX26_00754 0.26 +3.8
794,639 + MPMX26_00754 0.26 +2.9
794,639 + MPMX26_00754 0.26 +4.2
794,639 + MPMX26_00754 0.26 +2.6
794,639 + MPMX26_00754 0.26 +2.7
794,676 + MPMX26_00754 0.29 +2.3
794,830 + MPMX26_00754 0.42 +1.8
794,876 + MPMX26_00754 0.46 +2.7
794,876 + MPMX26_00754 0.46 +2.5
794,882 + MPMX26_00754 0.47 +3.2
794,888 + MPMX26_00754 0.47 +2.2
794,888 + MPMX26_00754 0.47 +2.0
794,977 + MPMX26_00754 0.55 +2.3
795,006 + MPMX26_00754 0.57 +2.9
795,006 + MPMX26_00754 0.57 +3.4
795,006 + MPMX26_00754 0.57 +3.0
795,008 + MPMX26_00754 0.57 +3.0
795,023 + MPMX26_00754 0.59 +1.2
795,023 + MPMX26_00754 0.59 +3.1
795,023 + MPMX26_00754 0.59 +2.9
795,089 + MPMX26_00754 0.64 +2.6
795,089 + MPMX26_00754 0.64 +3.2
795,093 + MPMX26_00754 0.65 +2.1
795,094 + MPMX26_00754 0.65 +2.4
795,094 + MPMX26_00754 0.65 +3.2
795,153 + MPMX26_00754 0.70 +3.0
795,200 + MPMX26_00754 0.74 +2.8
795,202 + MPMX26_00754 0.74 +3.0
795,265 + MPMX26_00754 0.80 +4.0
795,279 + MPMX26_00754 0.81 +2.6
795,279 + MPMX26_00754 0.81 +2.5
795,281 + MPMX26_00754 0.81 +2.8
795,301 + MPMX26_00754 0.83 +2.0
795,301 + MPMX26_00754 0.83 +2.8
795,301 + MPMX26_00754 0.83 +2.3
795,303 + MPMX26_00754 0.83 +2.6
795,303 + MPMX26_00754 0.83 +1.9
795,303 + MPMX26_00754 0.83 +2.5
795,303 + MPMX26_00754 0.83 +3.3
795,414 + +3.3
795,450 + +3.8
795,455 + +3.3
795,455 + +3.5
795,455 + +3.9
795,455 + +3.4
795,455 + +3.5
795,455 + +2.5
795,455 + +3.4
795,455 + +3.1
795,455 + +2.5
795,455 + +3.7
795,455 + +3.4
795,457 + +4.2
795,520 + +3.0
795,546 + -0.1
795,552 + +2.5
795,557 + +2.6
795,557 + +2.6
795,591 + +2.7
795,591 + +3.3
795,591 + +2.3
795,591 + +1.7
795,595 + +2.2
795,600 + +2.5
795,628 + MPMX26_00755 0.13 +3.0
795,638 + MPMX26_00755 0.14 +2.9
795,638 + MPMX26_00755 0.14 +1.9
795,648 + MPMX26_00755 0.15 +0.7
795,674 + MPMX26_00755 0.18 +2.4
795,674 + MPMX26_00755 0.18 +2.5
795,674 + MPMX26_00755 0.18 +3.1
795,674 + MPMX26_00755 0.18 +3.2
795,691 + MPMX26_00755 0.20 +2.4
795,704 + MPMX26_00755 0.21 +3.5
795,710 + MPMX26_00755 0.22 +3.2
795,810 + MPMX26_00755 0.33 +3.0
795,820 + MPMX26_00755 0.34 +2.6
795,830 + MPMX26_00755 0.35 +4.4
795,830 + MPMX26_00755 0.35 +2.9
795,830 + MPMX26_00755 0.35 +2.8
795,830 + MPMX26_00755 0.35 +3.4
795,873 + MPMX26_00755 0.40 +2.8
795,882 + MPMX26_00755 0.41 +2.0
795,882 + MPMX26_00755 0.41 +3.0
795,892 + MPMX26_00755 0.42 +4.1
795,892 + MPMX26_00755 0.42 +2.9
795,892 + MPMX26_00755 0.42 +2.3
795,897 + MPMX26_00755 0.43 +3.0
795,901 + MPMX26_00755 0.43 +0.6
795,901 + MPMX26_00755 0.43 +3.7
795,994 + MPMX26_00755 0.54 +2.5
796,026 + MPMX26_00755 0.57 +2.9
796,045 + MPMX26_00755 0.59 +3.2
796,045 + MPMX26_00755 0.59 +3.4
796,045 + MPMX26_00755 0.59 +4.0
796,103 + MPMX26_00755 0.66 +3.0
796,115 + MPMX26_00755 0.67 +2.5
796,115 + MPMX26_00755 0.67 +3.0
796,115 + MPMX26_00755 0.67 +2.5
796,152 + MPMX26_00755 0.71 +1.8
796,176 + MPMX26_00755 0.74 +3.4
796,204 + MPMX26_00755 0.77 +3.4
796,209 + MPMX26_00755 0.78 +2.6
796,236 + MPMX26_00755 0.81 +2.8
796,244 + MPMX26_00755 0.82 +3.0
796,251 + MPMX26_00755 0.82 +3.1
796,251 + MPMX26_00755 0.82 +3.0
796,251 + MPMX26_00755 0.82 +2.7
796,251 + MPMX26_00755 0.82 +3.3
796,251 + MPMX26_00755 0.82 +2.9
796,251 + MPMX26_00755 0.82 +3.4
796,251 + MPMX26_00755 0.82 +3.0
796,251 + MPMX26_00755 0.82 +2.7
796,251 + MPMX26_00755 0.82 +2.6
796,251 + MPMX26_00755 0.82 +2.0
796,346 + +2.9
796,366 + +0.4
796,394 + +4.4
796,395 + +4.8
796,395 + +4.5
796,400 + +0.6
796,400 + -1.5

Or see this region's nucleotide sequence