Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4876 and GFF4877 overlap by 1 nucleotides GFF4877 and GFF4878 are separated by 51 nucleotides
GFF4876 - N-succinylglutamate 5-semialdehyde dehydrogenase, at 148,303 to 149,769
GFF4876
GFF4877 - Arginine N-succinyltransferase subunit beta, at 149,769 to 150,794
GFF4877
GFF4878 - Arginine N-succinyltransferase subunit alpha, at 150,846 to 151,865
GFF4878
Position (kb) 149
150
151 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 148.980 kb on - strand, within GFF4876 at 149.304 kb on + strand, within GFF4876 at 149.336 kb on + strand, within GFF4876 at 149.337 kb on - strand, within GFF4876 at 149.337 kb on - strand, within GFF4876 at 149.337 kb on - strand, within GFF4876 at 149.337 kb on - strand, within GFF4876 at 149.756 kb on + strand at 149.756 kb on + strand at 149.756 kb on + strand at 149.756 kb on + strand at 149.756 kb on + strand at 149.757 kb on - strand at 149.757 kb on - strand at 149.757 kb on - strand at 149.757 kb on - strand at 149.759 kb on - strand at 150.055 kb on + strand, within GFF4877 at 150.065 kb on - strand, within GFF4877 at 150.163 kb on + strand, within GFF4877 at 150.163 kb on + strand, within GFF4877 at 150.164 kb on - strand, within GFF4877 at 150.164 kb on - strand, within GFF4877 at 150.490 kb on + strand, within GFF4877 at 150.491 kb on - strand, within GFF4877 at 150.541 kb on + strand, within GFF4877 at 150.541 kb on + strand, within GFF4877 at 150.541 kb on + strand, within GFF4877 at 150.542 kb on - strand, within GFF4877 at 150.625 kb on + strand, within GFF4877 at 150.625 kb on + strand, within GFF4877 at 150.625 kb on + strand, within GFF4877 at 150.626 kb on - strand, within GFF4877 at 150.716 kb on + strand at 150.716 kb on + strand at 150.716 kb on + strand at 150.717 kb on - strand at 150.717 kb on - strand at 150.762 kb on + strand at 150.797 kb on + strand at 150.797 kb on + strand at 150.797 kb on + strand at 150.797 kb on + strand at 150.797 kb on + strand at 150.797 kb on + strand at 150.798 kb on - strand at 150.798 kb on - strand at 150.798 kb on - strand at 150.798 kb on - strand at 150.798 kb on - strand at 150.994 kb on + strand, within GFF4878 at 150.994 kb on + strand, within GFF4878 at 150.995 kb on - strand, within GFF4878 at 151.117 kb on + strand, within GFF4878 at 151.117 kb on + strand, within GFF4878 at 151.118 kb on - strand, within GFF4878 at 151.118 kb on - strand, within GFF4878 at 151.118 kb on - strand, within GFF4878 at 151.225 kb on + strand, within GFF4878 at 151.225 kb on + strand, within GFF4878 at 151.225 kb on + strand, within GFF4878 at 151.225 kb on + strand, within GFF4878 at 151.226 kb on - strand, within GFF4878 at 151.226 kb on - strand, within GFF4878 at 151.226 kb on - strand, within GFF4878 at 151.226 kb on - strand, within GFF4878 at 151.226 kb on - strand, within GFF4878 at 151.300 kb on + strand, within GFF4878 at 151.486 kb on + strand, within GFF4878 at 151.486 kb on + strand, within GFF4878 at 151.603 kb on + strand, within GFF4878 at 151.603 kb on + strand, within GFF4878 at 151.603 kb on + strand, within GFF4878 at 151.604 kb on - strand, within GFF4878 at 151.604 kb on - strand, within GFF4878 at 151.690 kb on + strand, within GFF4878 at 151.690 kb on + strand, within GFF4878 at 151.691 kb on - strand, within GFF4878 at 151.691 kb on - strand, within GFF4878 at 151.691 kb on - strand, within GFF4878
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 148,980 - GFF4876 0.46 +0.3 149,304 + GFF4876 0.68 +0.2 149,336 + GFF4876 0.70 -1.7 149,337 - GFF4876 0.70 +0.8 149,337 - GFF4876 0.70 +0.9 149,337 - GFF4876 0.70 -0.4 149,337 - GFF4876 0.70 +0.4 149,756 + -0.9 149,756 + -1.9 149,756 + -1.3 149,756 + -0.3 149,756 + -0.4 149,757 - -0.7 149,757 - -0.8 149,757 - -1.2 149,757 - -1.2 149,759 - -0.4 150,055 + GFF4877 0.28 -1.1 150,065 - GFF4877 0.29 -0.6 150,163 + GFF4877 0.38 -1.3 150,163 + GFF4877 0.38 -0.3 150,164 - GFF4877 0.38 -0.1 150,164 - GFF4877 0.38 -1.0 150,490 + GFF4877 0.70 -1.2 150,491 - GFF4877 0.70 -0.2 150,541 + GFF4877 0.75 -1.7 150,541 + GFF4877 0.75 -1.6 150,541 + GFF4877 0.75 -0.4 150,542 - GFF4877 0.75 -0.7 150,625 + GFF4877 0.83 -0.6 150,625 + GFF4877 0.83 -0.0 150,625 + GFF4877 0.83 -1.3 150,626 - GFF4877 0.84 -0.9 150,716 + -1.6 150,716 + -0.1 150,716 + -0.7 150,717 - +0.4 150,717 - -0.1 150,762 + -0.2 150,797 + -0.3 150,797 + -0.5 150,797 + -0.7 150,797 + +1.2 150,797 + +1.9 150,797 + +0.4 150,798 - -0.4 150,798 - +0.1 150,798 - -1.2 150,798 - +0.4 150,798 - -0.7 150,994 + GFF4878 0.15 -3.3 150,994 + GFF4878 0.15 -1.7 150,995 - GFF4878 0.15 -2.7 151,117 + GFF4878 0.27 -3.1 151,117 + GFF4878 0.27 -2.2 151,118 - GFF4878 0.27 -2.8 151,118 - GFF4878 0.27 -1.2 151,118 - GFF4878 0.27 -3.5 151,225 + GFF4878 0.37 -1.4 151,225 + GFF4878 0.37 -1.1 151,225 + GFF4878 0.37 -1.7 151,225 + GFF4878 0.37 -2.4 151,226 - GFF4878 0.37 -2.2 151,226 - GFF4878 0.37 -1.6 151,226 - GFF4878 0.37 -2.5 151,226 - GFF4878 0.37 -0.6 151,226 - GFF4878 0.37 -0.4 151,300 + GFF4878 0.45 -2.0 151,486 + GFF4878 0.63 -2.3 151,486 + GFF4878 0.63 -0.4 151,603 + GFF4878 0.74 -2.5 151,603 + GFF4878 0.74 -3.3 151,603 + GFF4878 0.74 -1.6 151,604 - GFF4878 0.74 -2.6 151,604 - GFF4878 0.74 -1.4 151,690 + GFF4878 0.83 -0.5 151,690 + GFF4878 0.83 -3.0 151,691 - GFF4878 0.83 -3.8 151,691 - GFF4878 0.83 -3.0 151,691 - GFF4878 0.83 -1.8
Or see this region's nucleotide sequence