Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4497 and GFF4498 are separated by 171 nucleotides GFF4498 and GFF4499 are separated by 22 nucleotides GFF4499 and GFF4500 are separated by 183 nucleotides
GFF4497 - 50S ribosomal protein L25, at 212,982 to 213,584
GFF4497
GFF4498 - Peptidyl-tRNA hydrolase, at 213,756 to 214,340
GFF4498
GFF4499 - Ribosome-binding ATPase YchF, at 214,363 to 215,463
GFF4499
GFF4500 - Fosmidomycin resistance protein, at 215,647 to 216,864
GFF4500
Position (kb) 214
215
216 Strain fitness (log2 ratio) -2
-1
0
1
2 at 214.345 kb on + strand at 214.395 kb on + strand at 214.978 kb on + strand, within GFF4499 at 214.978 kb on + strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 214.979 kb on - strand, within GFF4499 at 215.215 kb on + strand, within GFF4499 at 215.215 kb on + strand, within GFF4499 at 215.216 kb on - strand, within GFF4499 at 215.416 kb on + strand at 215.416 kb on + strand at 215.417 kb on - strand at 215.417 kb on - strand at 215.417 kb on - strand at 215.461 kb on + strand at 215.461 kb on + strand at 215.461 kb on + strand at 215.462 kb on - strand at 215.462 kb on - strand at 215.462 kb on - strand at 215.581 kb on + strand at 215.581 kb on + strand at 215.581 kb on + strand at 215.582 kb on - strand at 215.582 kb on - strand at 215.582 kb on - strand at 215.582 kb on - strand at 215.692 kb on + strand at 215.693 kb on - strand at 215.717 kb on + strand at 215.717 kb on + strand at 215.718 kb on - strand at 215.718 kb on - strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.723 kb on + strand at 215.724 kb on - strand at 215.724 kb on - strand at 215.724 kb on - strand at 215.827 kb on - strand, within GFF4500 at 215.849 kb on + strand, within GFF4500 at 215.850 kb on - strand, within GFF4500 at 216.107 kb on + strand, within GFF4500 at 216.108 kb on - strand, within GFF4500 at 216.119 kb on + strand, within GFF4500 at 216.119 kb on + strand, within GFF4500 at 216.120 kb on - strand, within GFF4500 at 216.120 kb on - strand, within GFF4500 at 216.120 kb on - strand, within GFF4500 at 216.140 kb on + strand, within GFF4500 at 216.140 kb on + strand, within GFF4500 at 216.140 kb on + strand, within GFF4500 at 216.141 kb on - strand, within GFF4500 at 216.141 kb on - strand, within GFF4500 at 216.141 kb on - strand, within GFF4500 at 216.146 kb on + strand, within GFF4500 at 216.146 kb on + strand, within GFF4500 at 216.146 kb on + strand, within GFF4500 at 216.146 kb on + strand, within GFF4500 at 216.281 kb on + strand, within GFF4500 at 216.281 kb on + strand, within GFF4500
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 214,345 + -1.1 214,395 + -0.4 214,978 + GFF4499 0.56 -0.8 214,978 + GFF4499 0.56 +1.1 214,979 - GFF4499 0.56 +0.2 214,979 - GFF4499 0.56 -0.4 214,979 - GFF4499 0.56 -1.0 214,979 - GFF4499 0.56 +2.1 214,979 - GFF4499 0.56 -2.0 214,979 - GFF4499 0.56 -1.4 214,979 - GFF4499 0.56 +0.6 214,979 - GFF4499 0.56 -0.4 214,979 - GFF4499 0.56 -1.4 215,215 + GFF4499 0.77 -0.9 215,215 + GFF4499 0.77 -0.3 215,216 - GFF4499 0.77 -1.0 215,416 + +0.4 215,416 + -0.8 215,417 - -0.4 215,417 - -0.0 215,417 - -0.6 215,461 + -0.0 215,461 + +0.2 215,461 + +0.7 215,462 - +0.6 215,462 - -0.1 215,462 - -1.1 215,581 + -1.1 215,581 + +1.1 215,581 + +0.2 215,582 - +0.3 215,582 - -1.1 215,582 - +0.7 215,582 - +1.4 215,692 + -0.8 215,693 - -0.8 215,717 + +1.2 215,717 + -0.5 215,718 - -0.2 215,718 - +0.1 215,723 + +0.0 215,723 + +0.1 215,723 + +0.2 215,723 + -0.8 215,723 + +0.2 215,723 + +0.1 215,723 + -0.6 215,724 - +0.2 215,724 - +1.0 215,724 - +1.0 215,827 - GFF4500 0.15 +0.6 215,849 + GFF4500 0.17 -2.7 215,850 - GFF4500 0.17 -0.5 216,107 + GFF4500 0.38 +2.4 216,108 - GFF4500 0.38 +2.1 216,119 + GFF4500 0.39 -0.1 216,119 + GFF4500 0.39 -0.3 216,120 - GFF4500 0.39 +0.6 216,120 - GFF4500 0.39 -1.1 216,120 - GFF4500 0.39 +0.9 216,140 + GFF4500 0.40 -0.6 216,140 + GFF4500 0.40 +0.8 216,140 + GFF4500 0.40 +0.7 216,141 - GFF4500 0.41 -0.6 216,141 - GFF4500 0.41 -1.0 216,141 - GFF4500 0.41 +0.8 216,146 + GFF4500 0.41 +0.9 216,146 + GFF4500 0.41 -0.5 216,146 + GFF4500 0.41 -0.3 216,146 + GFF4500 0.41 +0.2 216,281 + GFF4500 0.52 -0.1 216,281 + GFF4500 0.52 +0.6
Or see this region's nucleotide sequence