Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF402 and GFF403 are separated by 77 nucleotides GFF403 and GFF404 are separated by 133 nucleotides
GFF402 - Periplasmic dipeptide transport protein, at 444,789 to 446,378
GFF402
GFF403 - hypothetical protein, at 446,456 to 447,130
GFF403
GFF404 - Coenzyme A biosynthesis bifunctional protein CoaBC, at 447,264 to 448,472
GFF404
Position (kb) 446
447
448 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 445.462 kb on - strand, within GFF402 at 445.585 kb on + strand, within GFF402 at 445.585 kb on + strand, within GFF402 at 445.585 kb on + strand, within GFF402 at 445.586 kb on - strand, within GFF402 at 445.586 kb on - strand, within GFF402 at 445.731 kb on + strand, within GFF402 at 445.731 kb on + strand, within GFF402 at 445.732 kb on - strand, within GFF402 at 445.732 kb on - strand, within GFF402 at 445.732 kb on - strand, within GFF402 at 445.732 kb on - strand, within GFF402 at 445.732 kb on - strand, within GFF402 at 445.800 kb on + strand, within GFF402 at 445.801 kb on - strand, within GFF402 at 445.801 kb on - strand, within GFF402 at 445.822 kb on - strand, within GFF402 at 446.226 kb on + strand at 446.226 kb on + strand at 446.226 kb on + strand at 446.226 kb on + strand at 446.227 kb on - strand at 446.293 kb on - strand at 446.352 kb on + strand at 446.352 kb on + strand at 446.352 kb on + strand at 446.352 kb on + strand at 446.353 kb on - strand at 446.376 kb on + strand at 446.395 kb on + strand at 446.395 kb on + strand at 446.396 kb on - strand at 446.396 kb on - strand at 446.436 kb on - strand at 446.436 kb on - strand at 446.436 kb on - strand at 446.436 kb on - strand at 446.436 kb on - strand at 446.457 kb on + strand at 446.458 kb on - strand at 446.797 kb on - strand, within GFF403 at 447.124 kb on + strand at 447.124 kb on + strand at 447.124 kb on + strand at 447.124 kb on + strand at 447.125 kb on - strand at 447.125 kb on - strand at 447.125 kb on - strand at 447.130 kb on + strand at 447.130 kb on + strand at 447.130 kb on + strand at 447.130 kb on + strand at 447.130 kb on + strand at 447.130 kb on + strand at 447.131 kb on - strand at 447.131 kb on - strand at 447.131 kb on - strand at 447.131 kb on - strand at 447.131 kb on - strand at 447.180 kb on - strand at 447.184 kb on + strand at 447.184 kb on + strand at 447.185 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 445,462 - GFF402 0.42 -1.3 445,585 + GFF402 0.50 +0.7 445,585 + GFF402 0.50 +0.0 445,585 + GFF402 0.50 -0.2 445,586 - GFF402 0.50 -0.4 445,586 - GFF402 0.50 -1.6 445,731 + GFF402 0.59 +0.4 445,731 + GFF402 0.59 -0.4 445,732 - GFF402 0.59 -0.7 445,732 - GFF402 0.59 -0.4 445,732 - GFF402 0.59 +0.4 445,732 - GFF402 0.59 -0.2 445,732 - GFF402 0.59 +1.6 445,800 + GFF402 0.64 -1.4 445,801 - GFF402 0.64 +0.4 445,801 - GFF402 0.64 +0.8 445,822 - GFF402 0.65 +1.2 446,226 + -0.0 446,226 + +1.4 446,226 + -0.4 446,226 + -1.2 446,227 - -0.4 446,293 - -0.4 446,352 + +0.7 446,352 + +0.8 446,352 + -2.8 446,352 + -1.1 446,353 - +1.6 446,376 + -0.4 446,395 + +0.4 446,395 + -0.5 446,396 - +0.6 446,396 - +0.2 446,436 - +0.3 446,436 - +0.4 446,436 - +0.5 446,436 - -0.8 446,436 - +1.6 446,457 + +0.7 446,458 - -0.7 446,797 - GFF403 0.51 -1.7 447,124 + -0.4 447,124 + +1.2 447,124 + -0.2 447,124 + -0.1 447,125 - -1.2 447,125 - -0.1 447,125 - +0.8 447,130 + -1.2 447,130 + +0.7 447,130 + +0.9 447,130 + +0.4 447,130 + +0.3 447,130 + +0.4 447,131 - -0.6 447,131 - +0.2 447,131 - -0.2 447,131 - +0.5 447,131 - -0.0 447,180 - -0.1 447,184 + -0.0 447,184 + -0.4 447,185 - -1.1
Or see this region's nucleotide sequence