Strain Fitness in Sphingobium sp. HT1-2 around GFF1016

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
1,016,156	+		GFF1014	0.86	-0.5
1,016,177	-		GFF1014	0.89	-0.4
1,016,187	+				+0.6
1,016,189	-				-0.4
1,016,192	+				-0.4
1,016,195	-				+0.8
1,016,195	-				+2.1
1,016,205	-				-0.4
1,016,205	-				-0.9
1,016,205	-				+0.2
1,016,211	+				-0.7
1,016,218	+				-0.2
1,016,232	+				+0.9
1,016,232	+				+0.3
1,016,232	+				-0.5
1,016,240	-				+0.3
1,016,240	-				+0.4
1,016,240	-				-0.8
1,016,258	+				-0.6
1,016,260	+				-0.4
1,016,260	+				-2.5
1,016,266	-				-2.1
1,016,266	-				-1.0
1,016,266	-				+1.0
1,016,266	-				-0.9
1,016,268	-				-0.4
1,016,280	+				-0.5
1,016,280	+				+0.0
1,016,288	-				+0.5
1,016,288	-				-0.5
1,016,320	-				-1.2
1,016,324	+				+0.4
1,016,327	-				+1.0
1,016,334	+				-1.2
1,016,337	-				-0.4
1,016,351	+		GFF1015	0.11	-0.8
1,016,359	-		GFF1015	0.12	-1.8
1,016,359	-		GFF1015	0.12	-0.5
1,016,366	+		GFF1015	0.13	-0.4
1,016,366	+		GFF1015	0.13	-0.7
1,016,366	+		GFF1015	0.13	-1.4
1,016,367	-		GFF1015	0.13	+0.6
1,016,383	-		GFF1015	0.15	+0.8
1,016,391	+		GFF1015	0.16	-0.3
1,016,392	+		GFF1015	0.16	+0.8
1,016,397	+		GFF1015	0.16	-0.7
1,016,399	-		GFF1015	0.17	-1.3
1,016,413	+		GFF1015	0.18	-2.0
1,016,427	+		GFF1015	0.20	+2.2
1,016,431	-		GFF1015	0.20	-0.4
1,016,431	-		GFF1015	0.20	-1.8
1,016,434	-		GFF1015	0.21	-0.5
1,016,435	-		GFF1015	0.21	-1.5
1,016,435	-		GFF1015	0.21	-0.9
1,016,451	+		GFF1015	0.23	-0.6
1,016,453	+		GFF1015	0.23	+0.6
1,016,455	+		GFF1015	0.23	+0.7
1,016,459	-		GFF1015	0.24	+2.2
1,016,461	+		GFF1015	0.24	+0.5
1,016,464	-		GFF1015	0.24	-1.2
1,016,464	-		GFF1015	0.24	+0.6
1,016,479	-		GFF1015	0.26	-0.1
1,016,494	-		GFF1015	0.28	-0.9
1,016,494	-		GFF1015	0.28	-0.2
1,016,494	-		GFF1015	0.28	+1.4
1,016,516	+		GFF1015	0.30	-1.0
1,016,523	+		GFF1015	0.31	-0.9
1,016,531	-		GFF1015	0.32	-0.5
1,016,533	+		GFF1015	0.32	+0.3
1,016,562	+		GFF1015	0.36	+0.3
1,016,600	-		GFF1015	0.40	+1.8
1,016,600	-		GFF1015	0.40	-1.4
1,016,608	+		GFF1015	0.41	+0.9
1,016,609	+		GFF1015	0.41	-1.1
1,016,609	+		GFF1015	0.41	+0.3
1,016,610	-		GFF1015	0.41	-0.8
1,016,610	-		GFF1015	0.41	+0.8
1,016,610	-		GFF1015	0.41	-0.6
1,016,616	-		GFF1015	0.42	-0.8
1,016,623	+		GFF1015	0.43	-1.2
1,016,623	+		GFF1015	0.43	-0.6
1,016,623	+		GFF1015	0.43	-0.8
1,016,625	+		GFF1015	0.43	+0.1
1,016,625	+		GFF1015	0.43	-1.3
1,016,625	+		GFF1015	0.43	-0.2
1,016,628	+		GFF1015	0.43	-0.5
1,016,630	+		GFF1015	0.43	-2.3
1,016,630	+		GFF1015	0.43	-0.5
1,016,631	-		GFF1015	0.44	+0.8
1,016,631	-		GFF1015	0.44	+0.3
1,016,631	-		GFF1015	0.44	-1.3
1,016,638	-		GFF1015	0.44	-0.2
1,016,638	-		GFF1015	0.44	-1.1
1,016,640	+		GFF1015	0.45	-1.2
1,016,648	-		GFF1015	0.46	-0.4
1,016,648	-		GFF1015	0.46	+0.7
1,016,666	+		GFF1015	0.48	-1.8
1,016,679	-		GFF1015	0.49	-1.0
1,016,679	-		GFF1015	0.49	-0.0
1,016,684	+		GFF1015	0.50	+0.5
1,016,684	-		GFF1015	0.50	+0.6
1,016,690	+		GFF1015	0.50	+0.4
1,016,690	+		GFF1015	0.50	-0.6
1,016,690	+		GFF1015	0.50	-1.2
1,016,690	+		GFF1015	0.50	+0.9
1,016,690	+		GFF1015	0.50	-2.3
1,016,690	+		GFF1015	0.50	-0.5
1,016,690	+		GFF1015	0.50	-0.8
1,016,690	+		GFF1015	0.50	-0.8
1,016,690	+		GFF1015	0.50	+0.4
1,016,690	+		GFF1015	0.50	-2.3
1,016,692	-		GFF1015	0.51	-1.3
1,016,698	-		GFF1015	0.51	-2.2
1,016,698	-		GFF1015	0.51	+0.8
1,016,698	-		GFF1015	0.51	-0.3
1,016,698	-		GFF1015	0.51	-1.0
1,016,698	-		GFF1015	0.51	-0.5
1,016,746	+		GFF1015	0.57	+0.6
1,016,749	+		GFF1015	0.57	-1.0
1,016,757	-		GFF1015	0.58	-0.5
1,016,765	-		GFF1015	0.59	-1.2
1,016,767	+		GFF1015	0.59	-1.4
1,016,772	-		GFF1015	0.60	+1.1
1,016,772	-		GFF1015	0.60	-1.0
1,016,773	+		GFF1015	0.60	-1.2
1,016,774	+		GFF1015	0.60	-1.5
1,016,780	+		GFF1015	0.61	+0.0
1,016,780	+		GFF1015	0.61	-0.0
1,016,780	+		GFF1015	0.61	-0.2
1,016,780	+		GFF1015	0.61	-1.1
1,016,780	+		GFF1015	0.61	-1.2
1,016,780	+		GFF1015	0.61	+0.1
1,016,780	+		GFF1015	0.61	-0.6
1,016,788	-		GFF1015	0.62	+0.1
1,016,788	-		GFF1015	0.62	-0.5
1,016,788	-		GFF1015	0.62	+0.0
1,016,788	-		GFF1015	0.62	+0.0
1,016,788	-		GFF1015	0.62	-0.6
1,016,788	-		GFF1015	0.62	-1.4
1,016,788	-		GFF1015	0.62	-1.2
1,016,793	-		GFF1015	0.62	-1.0
1,016,830	-		GFF1015	0.67	-1.1
1,016,860	-		GFF1015	0.70	-1.4
1,016,873	-		GFF1015	0.72	-0.8
1,016,873	-		GFF1015	0.72	+0.4
1,016,873	-		GFF1015	0.72	-0.5
1,016,888	+		GFF1015	0.74	-0.5
1,016,894	-		GFF1015	0.74	+0.6
1,016,900	-		GFF1015	0.75	+0.2
1,016,906	-		GFF1015	0.76	+0.0
1,016,920	-		GFF1015	0.77	-0.2
1,016,923	+		GFF1015	0.78	+0.0
1,016,932	-		GFF1015	0.79	-0.8
1,016,932	-		GFF1015	0.79	-0.7
1,016,932	-		GFF1015	0.79	-1.7
1,016,939	+		GFF1015	0.79	-0.2
1,016,939	+		GFF1015	0.79	-0.5
1,016,949	+		GFF1015	0.81	-1.0
1,016,966	-		GFF1015	0.83	-1.2
1,016,979	+		GFF1015	0.84	-0.2
1,016,981	-		GFF1015	0.84	+1.4
1,016,989	-		GFF1015	0.85	-1.5
1,016,989	-		GFF1015	0.85	+0.2
1,017,004	+		GFF1015	0.87	-0.5
1,017,019	-		GFF1015	0.89	+0.2
1,017,026	-		GFF1015	0.90	-0.5
1,017,029	+				+0.1
1,017,037	-				+0.6
1,017,078	+				-1.6
1,017,089	+				-0.8
1,017,109	+				+0.4
1,017,117	+				-0.2
1,017,120	+				-1.5
1,017,122	+				+0.1
1,017,122	+				+0.5
1,017,122	+				-0.1
1,017,122	+				-1.1
1,017,124	+				+0.3
1,017,130	+				+0.9
1,017,130	+				-1.7
1,017,130	-				-0.7
1,017,130	-				-0.7
1,017,135	-				-0.4
1,017,143	+				-0.7
1,017,149	+				+0.6
1,017,149	+				-0.5
1,017,149	+				-0.0
1,017,149	+				+0.4
1,017,149	+				+1.5
1,017,149	+				+1.0
1,017,155	+				-0.7
1,017,157	-				-1.4
1,017,157	-				-1.1
1,017,157	-				-1.5
1,017,157	-				-2.0
1,017,157	-				+1.5
1,017,157	-				-1.5
1,017,157	-				+0.6
1,017,163	-				+1.5
1,017,163	-				+1.2
1,017,219	+				-1.2
1,017,226	-				-0.6
1,017,227	-				+0.7
1,017,269	+		GFF1016	0.11	+0.8
1,017,271	-		GFF1016	0.11	-0.7
1,017,275	+		GFF1016	0.11	-0.5
1,017,276	-		GFF1016	0.11	+0.1
1,017,279	-		GFF1016	0.11	+0.4
1,017,279	-		GFF1016	0.11	-0.7
1,017,279	-		GFF1016	0.11	+0.3
1,017,281	+		GFF1016	0.12	-1.5
1,017,291	+		GFF1016	0.12	-0.8
1,017,302	+		GFF1016	0.13	-0.6
1,017,346	-		GFF1016	0.17	-0.7
1,017,363	-		GFF1016	0.19	+0.9
1,017,363	-		GFF1016	0.19	+1.3
1,017,363	-		GFF1016	0.19	-0.2
1,017,363	-		GFF1016	0.19	-0.1
1,017,363	-		GFF1016	0.19	-1.6
1,017,437	+		GFF1016	0.25	+0.5
1,017,466	+		GFF1016	0.27	+2.1
1,017,470	-		GFF1016	0.27	-1.0
1,017,476	-		GFF1016	0.28	-0.1
1,017,538	-		GFF1016	0.33	-0.1
1,017,538	-		GFF1016	0.33	-1.5
1,017,553	-		GFF1016	0.34	-1.2
1,017,555	-		GFF1016	0.35	-1.7
1,017,555	-		GFF1016	0.35	-0.3
1,017,563	-		GFF1016	0.35	+0.1
1,017,568	-		GFF1016	0.36	-1.2
1,017,568	-		GFF1016	0.36	+0.5
1,017,588	+		GFF1016	0.37	-0.0
1,017,614	+		GFF1016	0.40	-0.8
1,017,615	+		GFF1016	0.40	+0.5
1,017,615	+		GFF1016	0.40	-0.4
1,017,624	-		GFF1016	0.40	+0.1
1,017,638	+		GFF1016	0.42	+0.3
1,017,646	-		GFF1016	0.42	+0.7
1,017,659	-		GFF1016	0.43	-1.8
1,017,675	+		GFF1016	0.45	-0.5
1,017,675	+		GFF1016	0.45	+0.4
1,017,675	+		GFF1016	0.45	-0.6
1,017,675	+		GFF1016	0.45	+1.2
1,017,675	+		GFF1016	0.45	+0.3
1,017,675	+		GFF1016	0.45	-1.6
1,017,675	-		GFF1016	0.45	-0.3
1,017,683	-		GFF1016	0.45	-0.6
1,017,683	-		GFF1016	0.45	+0.2
1,017,683	-		GFF1016	0.45	+0.0
1,017,683	-		GFF1016	0.45	-0.6
1,017,685	+		GFF1016	0.45	+0.5
1,017,685	-		GFF1016	0.45	-0.4
1,017,693	-		GFF1016	0.46	+0.6
1,017,693	-		GFF1016	0.46	+0.1
1,017,740	+		GFF1016	0.50	-1.6
1,017,743	-		GFF1016	0.50	+1.4
1,017,767	+		GFF1016	0.52	+0.5
1,017,767	+		GFF1016	0.52	-0.4
1,017,771	+		GFF1016	0.53	+0.1
1,017,775	-		GFF1016	0.53	-2.0
1,017,777	+		GFF1016	0.53	+0.4
1,017,792	-		GFF1016	0.54	-0.4
1,017,792	-		GFF1016	0.54	+0.9
1,017,827	+		GFF1016	0.57	-1.4
1,017,829	+		GFF1016	0.58	+0.6
1,017,853	+		GFF1016	0.60	-0.8
1,017,861	-		GFF1016	0.60	+1.0
1,017,890	+		GFF1016	0.63	+1.2
1,017,900	-		GFF1016	0.63	+0.5
1,017,908	-		GFF1016	0.64	-0.2
1,017,914	-		GFF1016	0.65	-1.2
1,017,916	+		GFF1016	0.65	+0.8
1,017,916	+		GFF1016	0.65	+1.0
1,017,927	-		GFF1016	0.66	-0.5
1,017,944	+		GFF1016	0.67	-1.4
1,017,956	+		GFF1016	0.68	+0.1
1,017,992	-		GFF1016	0.71	+0.6
1,018,008	+		GFF1016	0.73	-0.5
1,018,010	+		GFF1016	0.73	+0.5
1,018,016	-		GFF1016	0.73	-1.0
1,018,050	-		GFF1016	0.76	+0.6
1,018,129	-		GFF1016	0.83	-0.6
1,018,143	+		GFF1016	0.84	+0.5
1,018,154	+		GFF1016	0.85	+0.0
1,018,154	-		GFF1016	0.85	-0.7
1,018,156	+		GFF1016	0.85	-0.5
1,018,162	-		GFF1016	0.85	-1.2
1,018,164	+		GFF1016	0.86	+1.4
1,018,167	-		GFF1016	0.86	-1.0
1,018,172	-		GFF1016	0.86	-0.8
1,018,177	+		GFF1016	0.87	-0.7
1,018,205	-		GFF1016	0.89	+0.8
1,018,247	+				-1.0
1,018,248	-				-1.7
1,018,255	-				+0.4
1,018,255	-				-0.4
1,018,257	+				-1.4
1,018,257	+				+0.6
1,018,257	+				-2.1
1,018,257	+				-0.6
1,018,265	-				-0.4
1,018,265	-				-1.8
1,018,265	-				-0.7
1,018,295	-				-1.0
1,018,304	+				+1.2
1,018,304	+				+0.3
1,018,304	+				-1.8
1,018,312	-				+0.1
1,018,312	-				-1.3
1,018,318	-				-2.2
1,018,329	-				-1.7
1,018,330	-				+1.1
1,018,345	+				+0.5
1,018,345	+				-1.1
1,018,345	+				+1.2
1,018,351	+				-0.6
1,018,351	+				-0.6
1,018,353	-				-0.2
1,018,353	-				-1.5
1,018,353	-				+0.6
1,018,359	-				+0.6
1,018,359	-				+0.5
1,018,359	-				+0.7
1,018,359	-				-0.4
1,018,369	+				-0.9
1,018,377	-				+0.1
1,018,377	-				+0.3
1,018,440	+		GFF1017	0.60	-0.2
1,018,450	+		GFF1017	0.68	+0.3
1,018,450	+		GFF1017	0.68	-1.7
1,018,450	+		GFF1017	0.68	-0.7
1,018,450	+		GFF1017	0.68	-0.6
1,018,450	+		GFF1017	0.68	-0.8
1,018,458	-		GFF1017	0.75	-0.9
1,018,458	-		GFF1017	0.75	-0.1
1,018,458	-		GFF1017	0.75	+0.2
1,018,458	-		GFF1017	0.75	+0.2
1,018,459	-		GFF1017	0.76	+0.3
1,018,559	-				-2.2
1,018,567	-				-0.7
1,018,579	+				-1.5
1,018,579	+				-0.9
1,018,579	+				-0.1
1,018,579	+				-0.8
1,018,587	-		GFF1018	0.11	-0.7
1,018,587	-		GFF1018	0.11	-0.2
1,018,587	-		GFF1018	0.11	-2.2
1,018,587	-		GFF1018	0.11	-0.3
1,018,598	+		GFF1018	0.12	-0.5
1,018,600	-		GFF1018	0.12	+0.3
1,018,617	-		GFF1018	0.14	-0.6
1,018,629	-		GFF1018	0.16	+0.8
1,018,629	-		GFF1018	0.16	-1.1
1,018,644	+		GFF1018	0.18	-0.4
1,018,644	+		GFF1018	0.18	-0.5
1,018,644	+		GFF1018	0.18	-1.1
1,018,644	+		GFF1018	0.18	-1.3
1,018,644	+		GFF1018	0.18	-0.1
1,018,644	+		GFF1018	0.18	-1.1
1,018,644	+		GFF1018	0.18	+1.1
1,018,644	+		GFF1018	0.18	-0.4
1,018,644	+		GFF1018	0.18	-2.0
1,018,647	-		GFF1018	0.18	+1.1
1,018,652	-		GFF1018	0.19	+0.4
1,018,652	-		GFF1018	0.19	-1.2
1,018,652	-		GFF1018	0.19	+1.0
1,018,652	-		GFF1018	0.19	-2.2
1,018,652	-		GFF1018	0.19	-0.9
1,018,657	+		GFF1018	0.19	-1.2
1,018,657	+		GFF1018	0.19	-0.6
1,018,657	+		GFF1018	0.19	-0.8
1,018,657	+		GFF1018	0.19	+1.2
1,018,657	+		GFF1018	0.19	+0.1
1,018,663	-		GFF1018	0.20	+0.5
1,018,663	-		GFF1018	0.20	-1.1
1,018,663	-		GFF1018	0.20	+0.4
1,018,670	-		GFF1018	0.21	+0.4
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1,018,735	+		GFF1018	0.29	-0.9
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1,018,973	-		GFF1018	0.57	-2.1
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1,019,256	+				-1.2
1,019,261	+				-0.2
1,019,261	+				-1.4
1,019,261	-				-0.4
1,019,266	+				-0.9
1,019,266	+				-1.2
1,019,269	-				-0.1
1,019,274	-				-1.8
1,019,276	+				-0.5
1,019,276	+				+0.7
1,019,279	-				+0.0
1,019,279	-				+0.8
1,019,279	-				-1.4
1,019,284	-				-1.4
1,019,284	-				-1.2
1,019,284	-				+0.0
1,019,284	-				-1.7
1,019,284	-				+0.1
1,019,284	-				+0.1
1,019,284	-				-1.2
1,019,284	-				-0.9
1,019,285	-				-0.7
1,019,285	-				+1.4
1,019,313	+				-0.7
1,019,323	+				-0.5
1,019,331	-				+0.6