Strain Fitness in Sphingobium sp. HT1-2 around GFF2577

Experiment: EMM_noCarbon with Sucrose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with Sucrose and Ammonium Sulfate
2,591,581	+		GFF2576	0.39	-1.4
2,591,585	+		GFF2576	0.39	-1.2
2,591,586	+		GFF2576	0.39	-0.5
2,591,586	+		GFF2576	0.39	-0.5
2,591,590	+		GFF2576	0.39	-1.3
2,591,592	-		GFF2576	0.39	+1.3
2,591,595	+		GFF2576	0.40	-0.7
2,591,602	+		GFF2576	0.40	+0.2
2,591,602	+		GFF2576	0.40	+0.1
2,591,605	+		GFF2576	0.40	+0.7
2,591,611	+		GFF2576	0.41	+0.0
2,591,611	+		GFF2576	0.41	-0.0
2,591,612	+		GFF2576	0.41	-1.5
2,591,612	+		GFF2576	0.41	+0.5
2,591,612	+		GFF2576	0.41	-0.1
2,591,612	+		GFF2576	0.41	-0.8
2,591,612	+		GFF2576	0.41	+0.3
2,591,612	+		GFF2576	0.41	-0.2
2,591,612	+		GFF2576	0.41	+0.7
2,591,612	+		GFF2576	0.41	-1.8
2,591,612	+		GFF2576	0.41	-0.4
2,591,612	+		GFF2576	0.41	-1.5
2,591,612	+		GFF2576	0.41	-0.6
2,591,620	-		GFF2576	0.42	+0.0
2,591,620	-		GFF2576	0.42	+0.2
2,591,620	-		GFF2576	0.42	-2.5
2,591,620	-		GFF2576	0.42	+0.3
2,591,620	-		GFF2576	0.42	+0.1
2,591,620	-		GFF2576	0.42	+0.1
2,591,620	-		GFF2576	0.42	-2.0
2,591,620	-		GFF2576	0.42	-0.8
2,591,620	-		GFF2576	0.42	+0.2
2,591,633	+		GFF2576	0.42	-1.7
2,591,645	+		GFF2576	0.43	+1.1
2,591,648	-		GFF2576	0.44	-0.6
2,591,653	-		GFF2576	0.44	+0.6
2,591,653	-		GFF2576	0.44	-0.3
2,591,657	+		GFF2576	0.44	-1.3
2,591,681	+		GFF2576	0.46	-1.6
2,591,681	+		GFF2576	0.46	-0.4
2,591,681	+		GFF2576	0.46	+0.9
2,591,681	+		GFF2576	0.46	-0.3
2,591,681	+		GFF2576	0.46	+0.5
2,591,681	+		GFF2576	0.46	-1.7
2,591,681	+		GFF2576	0.46	-0.5
2,591,681	+		GFF2576	0.46	-0.9
2,591,681	+		GFF2576	0.46	-0.5
2,591,689	-		GFF2576	0.47	-0.1
2,591,689	-		GFF2576	0.47	-0.7
2,591,689	-		GFF2576	0.47	-0.3
2,591,689	-		GFF2576	0.47	+0.5
2,591,689	-		GFF2576	0.47	-1.3
2,591,689	-		GFF2576	0.47	-1.1
2,591,689	-		GFF2576	0.47	-0.5
2,591,689	-		GFF2576	0.47	-1.3
2,591,689	-		GFF2576	0.47	+0.4
2,591,689	-		GFF2576	0.47	+0.6
2,591,689	-		GFF2576	0.47	-2.6
2,591,689	-		GFF2576	0.47	-0.4
2,591,690	+		GFF2576	0.47	-0.3
2,591,708	+		GFF2576	0.48	-0.4
2,591,708	-		GFF2576	0.48	+1.0
2,591,715	+		GFF2576	0.48	-0.4
2,591,715	+		GFF2576	0.48	-1.7
2,591,715	+		GFF2576	0.48	-0.0
2,591,715	+		GFF2576	0.48	-0.9
2,591,715	+		GFF2576	0.48	+1.3
2,591,717	+		GFF2576	0.49	-1.8
2,591,724	+		GFF2576	0.49	-0.1
2,591,732	-		GFF2576	0.50	+0.4
2,591,732	-		GFF2576	0.50	-0.8
2,591,732	-		GFF2576	0.50	+1.1
2,591,736	+		GFF2576	0.50	+0.1
2,591,744	-		GFF2576	0.51	+0.3
2,591,754	-		GFF2576	0.51	-1.4
2,591,816	+		GFF2576	0.56	-1.7
2,591,816	+		GFF2576	0.56	-0.7
2,591,819	-		GFF2576	0.56	+0.0
2,591,869	+		GFF2576	0.60	-1.4
2,591,869	+		GFF2576	0.60	-1.1
2,591,880	+		GFF2576	0.61	-0.3
2,591,880	+		GFF2576	0.61	+0.2
2,591,888	-		GFF2576	0.61	-1.3
2,591,888	-		GFF2576	0.61	-0.5
2,591,888	-		GFF2576	0.61	-0.8
2,591,888	-		GFF2576	0.61	-1.6
2,591,895	+		GFF2576	0.62	-0.0
2,591,895	+		GFF2576	0.62	+1.2
2,591,903	-		GFF2576	0.62	-0.8
2,591,903	-		GFF2576	0.62	+1.2
2,591,903	-		GFF2576	0.62	-1.8
2,591,903	-		GFF2576	0.62	-0.5
2,591,903	-		GFF2576	0.62	-1.1
2,591,903	-		GFF2576	0.62	-0.6
2,591,913	+		GFF2576	0.63	+0.6
2,591,928	-		GFF2576	0.64	-0.5
2,591,931	+		GFF2576	0.64	+0.0
2,591,939	-		GFF2576	0.65	+0.2
2,591,941	+		GFF2576	0.65	-1.3
2,591,941	+		GFF2576	0.65	-0.5
2,591,941	+		GFF2576	0.65	-2.1
2,591,941	+		GFF2576	0.65	-2.2
2,591,941	+		GFF2576	0.65	+0.4
2,591,942	-		GFF2576	0.65	-0.3
2,591,949	-		GFF2576	0.66	-1.0
2,591,949	-		GFF2576	0.66	-0.5
2,591,949	-		GFF2576	0.66	+0.6
2,591,949	-		GFF2576	0.66	-0.1
2,591,954	+		GFF2576	0.66	-0.7
2,591,954	+		GFF2576	0.66	-0.7
2,591,976	+		GFF2576	0.68	-0.2
2,591,976	-		GFF2576	0.68	-0.3
2,591,987	+		GFF2576	0.68	+1.5
2,591,994	+		GFF2576	0.69	+0.5
2,591,994	+		GFF2576	0.69	-0.6
2,592,002	+		GFF2576	0.69	-0.5
2,592,009	+		GFF2576	0.70	-1.2
2,592,009	+		GFF2576	0.70	-0.3
2,592,034	-		GFF2576	0.72	-0.9
2,592,034	-		GFF2576	0.72	+0.5
2,592,036	+		GFF2576	0.72	-0.6
2,592,039	-		GFF2576	0.72	-0.6
2,592,055	+		GFF2576	0.73	-0.3
2,592,059	+		GFF2576	0.74	-0.8
2,592,067	+		GFF2576	0.74	+0.4
2,592,067	+		GFF2576	0.74	+1.4
2,592,074	-		GFF2576	0.75	-1.0
2,592,081	+		GFF2576	0.75	-0.7
2,592,089	-		GFF2576	0.76	-0.2
2,592,097	+		GFF2576	0.76	-1.7
2,592,108	-		GFF2576	0.77	-0.3
2,592,116	-		GFF2576	0.78	-0.7
2,592,144	+		GFF2576	0.80	-0.6
2,592,150	+		GFF2576	0.80	+0.2
2,592,152	-		GFF2576	0.80	-1.5
2,592,152	-		GFF2576	0.80	-2.1
2,592,160	+		GFF2576	0.81	+0.2
2,592,160	+		GFF2576	0.81	-0.1
2,592,160	+		GFF2576	0.81	+1.1
2,592,160	+		GFF2576	0.81	-0.3
2,592,168	-		GFF2576	0.82	-2.2
2,592,168	-		GFF2576	0.82	-0.4
2,592,168	-		GFF2576	0.82	-0.1
2,592,183	-		GFF2576	0.83	+1.0
2,592,190	+		GFF2576	0.83	-0.2
2,592,190	+		GFF2576	0.83	-0.3
2,592,190	+		GFF2576	0.83	-2.7
2,592,190	+		GFF2576	0.83	-0.8
2,592,192	+		GFF2576	0.83	-0.9
2,592,192	+		GFF2576	0.83	-1.3
2,592,192	+		GFF2576	0.83	-1.3
2,592,192	+		GFF2576	0.83	-1.6
2,592,192	+		GFF2576	0.83	+0.1
2,592,192	+		GFF2576	0.83	-0.4
2,592,197	+		GFF2576	0.84	-0.3
2,592,197	+		GFF2576	0.84	+0.1
2,592,200	-		GFF2576	0.84	-1.5
2,592,200	-		GFF2576	0.84	+0.9
2,592,200	-		GFF2576	0.84	-1.5
2,592,200	-		GFF2576	0.84	+0.0
2,592,200	-		GFF2576	0.84	+0.6
2,592,205	-		GFF2576	0.84	-0.3
2,592,210	+		GFF2576	0.85	-1.1
2,592,212	+		GFF2576	0.85	-1.1
2,592,232	+		GFF2576	0.86	+1.2
2,592,240	+		GFF2576	0.87	-0.5
2,592,240	-		GFF2576	0.87	-1.5
2,592,247	-		GFF2576	0.87	-0.6
2,592,248	-		GFF2576	0.87	-0.4
2,592,251	+		GFF2576	0.88	-1.1
2,592,259	-		GFF2576	0.88	+0.4
2,592,269	+		GFF2576	0.89	-0.2
2,592,272	-		GFF2576	0.89	+0.5
2,592,296	-				-1.3
2,592,309	+				-1.1
2,592,330	-				-1.6
2,592,349	+				-1.1
2,592,355	+				+0.4
2,592,357	+				-2.2
2,592,363	-				-0.5
2,592,365	-				-1.7
2,592,378	-				-1.3
2,592,380	+				-1.4
2,592,380	+				-1.9
2,592,380	+				-1.8
2,592,382	+				-0.7
2,592,388	-				-0.7
2,592,389	+				-2.4
2,592,395	+				-1.0
2,592,398	-				-0.5
2,592,403	-				-1.4
2,592,421	-				-0.0
2,592,421	-				+0.0
2,592,438	+				-0.8
2,592,495	+				-0.3
2,592,501	+				+2.3
2,592,501	+				+1.0
2,592,501	+				-0.3
2,592,502	+				-1.3
2,592,502	-				-0.4
2,592,509	-				+0.1
2,592,509	-				-1.8
2,592,509	-				-0.1
2,592,559	-				+0.6
2,592,585	-				-0.3
2,592,593	+				-0.8
2,592,600	+		GFF2577	0.12	-0.7
2,592,600	+		GFF2577	0.12	-1.8
2,592,600	+		GFF2577	0.12	-1.1
2,592,608	-		GFF2577	0.16	+1.0
2,592,608	-		GFF2577	0.16	-1.4
2,592,608	-		GFF2577	0.16	-2.2
2,592,617	-		GFF2577	0.21	-0.9
2,592,620	+		GFF2577	0.23	-1.4
2,592,620	+		GFF2577	0.23	-0.1
2,592,623	-		GFF2577	0.25	+0.6
2,592,633	+		GFF2577	0.30	+1.0
2,592,635	-		GFF2577	0.31	-1.3
2,592,725	-		GFF2577	0.80	-1.8
2,592,725	-		GFF2577	0.80	+1.2
2,592,732	+		GFF2577	0.84	-0.9
2,592,732	+		GFF2577	0.84	-1.4
2,592,732	+		GFF2577	0.84	-0.7
2,592,732	+		GFF2577	0.84	+0.6
2,592,740	-		GFF2577	0.89	+0.3
2,592,740	-		GFF2577	0.89	-0.5
2,592,740	-		GFF2577	0.89	+0.7
2,592,740	-		GFF2577	0.89	-0.6
2,592,756	+				-1.5
2,592,770	+				-1.1
2,592,780	+				-0.5
2,592,789	+				-1.1
2,592,790	+				-1.6
2,592,808	+				+0.7
2,592,816	-				+2.1
2,592,858	+				-0.1
2,592,902	-				-0.3
2,592,950	+				+0.8
2,592,950	+				-0.4
2,592,950	+				-0.7
2,592,950	+				-0.4
2,592,950	+				-1.2
2,592,955	+				+0.2
2,592,958	-				-1.3
2,592,958	-				-0.4
2,592,958	-				-0.5
2,592,963	-				-0.0
2,592,977	+				-0.7
2,593,012	+				+0.0
2,593,035	-				-0.8
2,593,056	-				-1.2
2,593,081	+				+0.5
2,593,081	+				-0.8
2,593,081	-				-0.1
2,593,116	+				-0.5
2,593,116	+				-1.2
2,593,121	+				-0.8
2,593,121	+				-0.4
2,593,129	-		GFF2578	0.10	-1.4
2,593,129	-		GFF2578	0.10	-1.0
2,593,129	-		GFF2578	0.10	-1.3
2,593,131	+		GFF2578	0.10	-1.3
2,593,131	+		GFF2578	0.10	+1.4
2,593,136	+		GFF2578	0.10	-1.1
2,593,136	+		GFF2578	0.10	-1.1
2,593,141	+		GFF2578	0.10	-1.4
2,593,141	+		GFF2578	0.10	-0.4
2,593,141	+		GFF2578	0.10	-1.7
2,593,144	-		GFF2578	0.11	-1.0
2,593,147	-		GFF2578	0.11	-0.6
2,593,158	+		GFF2578	0.11	-0.5
2,593,159	+		GFF2578	0.11	+0.2
2,593,165	-		GFF2578	0.11	-0.9
2,593,166	-		GFF2578	0.11	-0.6
2,593,170	-		GFF2578	0.11	-0.1
2,593,172	-		GFF2578	0.12	+0.6
2,593,184	-		GFF2578	0.12	-1.9
2,593,186	+		GFF2578	0.12	-0.9
2,593,186	+		GFF2578	0.12	+0.4
2,593,190	+		GFF2578	0.12	+0.1
2,593,236	+		GFF2578	0.14	+0.7
2,593,257	+		GFF2578	0.15	-0.5
2,593,257	+		GFF2578	0.15	-0.8
2,593,257	+		GFF2578	0.15	-1.8
2,593,257	-		GFF2578	0.15	-1.7
2,593,265	-		GFF2578	0.15	+0.2
2,593,265	-		GFF2578	0.15	-0.9
2,593,281	-		GFF2578	0.15	-0.1
2,593,291	-		GFF2578	0.16	-1.5
2,593,300	-		GFF2578	0.16	+0.2
2,593,301	-		GFF2578	0.16	-0.8
2,593,329	+		GFF2578	0.17	-1.5
2,593,329	+		GFF2578	0.17	-0.9
2,593,329	+		GFF2578	0.17	+0.4
2,593,331	-		GFF2578	0.17	-0.4
2,593,334	+		GFF2578	0.17	+0.3
2,593,337	-		GFF2578	0.17	-2.3
2,593,337	-		GFF2578	0.17	-0.8
2,593,337	-		GFF2578	0.17	+1.0
2,593,342	-		GFF2578	0.18	-1.6
2,593,342	-		GFF2578	0.18	+0.6
2,593,342	-		GFF2578	0.18	+0.1
2,593,363	+		GFF2578	0.18	-0.8
2,593,373	+		GFF2578	0.19	+1.2
2,593,381	-		GFF2578	0.19	-2.5
2,593,381	-		GFF2578	0.19	+0.0
2,593,383	+		GFF2578	0.19	-0.1
2,593,484	+		GFF2578	0.23	+0.3
2,593,503	-		GFF2578	0.23	-0.8
2,593,529	-		GFF2578	0.24	-1.6
2,593,529	-		GFF2578	0.24	+0.8
2,593,534	-		GFF2578	0.24	-1.7
2,593,540	+		GFF2578	0.25	+1.4
2,593,582	+		GFF2578	0.26	-0.6
2,593,595	-		GFF2578	0.27	-0.9
2,593,596	+		GFF2578	0.27	+1.0
2,593,604	-		GFF2578	0.27	+0.7
2,593,634	+		GFF2578	0.28	-1.0
2,593,636	-		GFF2578	0.28	-1.1
2,593,638	+		GFF2578	0.28	-0.9
2,593,647	+		GFF2578	0.29	-0.7
2,593,647	+		GFF2578	0.29	-0.8
2,593,647	+		GFF2578	0.29	+0.3
2,593,647	+		GFF2578	0.29	-0.8
2,593,647	+		GFF2578	0.29	-0.6
2,593,647	+		GFF2578	0.29	+1.8
2,593,647	+		GFF2578	0.29	+0.2
2,593,647	+		GFF2578	0.29	-0.5
2,593,647	+		GFF2578	0.29	+0.3
2,593,647	+		GFF2578	0.29	+1.7
2,593,647	+		GFF2578	0.29	+0.6
2,593,647	+		GFF2578	0.29	+0.7
2,593,655	-		GFF2578	0.29	-1.4
2,593,655	-		GFF2578	0.29	-0.7
2,593,655	-		GFF2578	0.29	-0.1
2,593,655	-		GFF2578	0.29	-1.0
2,593,655	-		GFF2578	0.29	-0.3
2,593,655	-		GFF2578	0.29	+0.8
2,593,655	-		GFF2578	0.29	-0.3
2,593,655	-		GFF2578	0.29	-1.8
2,593,655	-		GFF2578	0.29	-1.5
2,593,655	-		GFF2578	0.29	-1.4
2,593,655	-		GFF2578	0.29	-0.7
2,593,655	-		GFF2578	0.29	-0.5
2,593,655	-		GFF2578	0.29	-1.1
2,593,655	-		GFF2578	0.29	+0.5
2,593,655	-		GFF2578	0.29	-0.7
2,593,690	+		GFF2578	0.30	-1.6
2,593,691	-		GFF2578	0.30	-0.3
2,593,704	+		GFF2578	0.31	-1.1
2,593,714	+		GFF2578	0.31	-0.6
2,593,726	-		GFF2578	0.31	+0.0
2,593,726	-		GFF2578	0.31	-0.8
2,593,736	+		GFF2578	0.32	+0.6
2,593,736	+		GFF2578	0.32	-1.3
2,593,736	+		GFF2578	0.32	-1.3
2,593,736	+		GFF2578	0.32	-1.2
2,593,736	+		GFF2578	0.32	-0.3
2,593,736	+		GFF2578	0.32	-1.0
2,593,736	+		GFF2578	0.32	-0.2
2,593,744	-		GFF2578	0.32	-1.2
2,593,744	-		GFF2578	0.32	-0.1
2,593,744	-		GFF2578	0.32	-0.9
2,593,744	-		GFF2578	0.32	+1.2
2,593,744	-		GFF2578	0.32	+0.9
2,593,744	-		GFF2578	0.32	-1.4
2,593,744	-		GFF2578	0.32	-1.3
2,593,744	-		GFF2578	0.32	-1.1
2,593,745	-		GFF2578	0.32	-0.3