Strain Fitness in Sphingobium sp. HT1-2 around GFF2695

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
2,716,388	+				+0.9
2,716,388	+				-0.9
2,716,396	-				+0.8
2,716,396	-				-1.2
2,716,397	-				+1.4
2,716,403	+				+0.5
2,716,403	-				+0.6
2,716,414	+				-0.0
2,716,414	+				+0.4
2,716,414	+				+1.4
2,716,414	+				+0.3
2,716,414	+				-0.4
2,716,414	+				-0.4
2,716,414	+				-0.6
2,716,414	+				-1.1
2,716,414	+				+0.4
2,716,414	+				+0.4
2,716,414	+				-0.1
2,716,414	+				+0.9
2,716,422	-				+0.9
2,716,422	-				+0.4
2,716,422	-				-1.8
2,716,422	-				+1.6
2,716,422	-				-0.3
2,716,424	+				-0.4
2,716,429	+				-1.2
2,716,429	+				+0.1
2,716,432	-				+1.1
2,716,432	-				+0.3
2,716,432	-				-0.8
2,716,437	-				+1.0
2,716,437	-				-1.3
2,716,437	-				-1.0
2,716,441	+				+0.0
2,716,441	+				+0.3
2,716,449	-				+0.1
2,716,455	-				-0.4
2,716,462	+				+0.6
2,716,463	+				-0.9
2,716,471	-				-0.8
2,716,476	-				+0.0
2,716,490	-				-0.2
2,716,497	-				-0.1
2,716,547	+				+0.2
2,716,554	-				-0.3
2,716,574	+				+0.3
2,716,584	+				-1.3
2,716,668	+		GFF2694	0.23	+0.8
2,716,670	+		GFF2694	0.24	+0.2
2,716,670	-		GFF2694	0.24	-2.5
2,716,673	+		GFF2694	0.25	+0.2
2,716,681	+		GFF2694	0.28	-0.5
2,716,681	-		GFF2694	0.28	-2.6
2,716,681	-		GFF2694	0.28	+0.3
2,716,722	+		GFF2694	0.43	-0.9
2,716,755	-		GFF2694	0.56	+0.3
2,716,757	-		GFF2694	0.56	-0.2
2,716,770	+		GFF2694	0.61	+0.1
2,716,783	-		GFF2694	0.66	+0.2
2,716,798	+		GFF2694	0.71	-1.3
2,716,806	-		GFF2694	0.74	+0.1
2,716,809	+		GFF2694	0.76	-1.0
2,716,809	+		GFF2694	0.76	-1.6
2,716,809	+		GFF2694	0.76	+0.5
2,716,809	+		GFF2694	0.76	+0.2
2,716,809	+		GFF2694	0.76	+0.5
2,716,809	+		GFF2694	0.76	-0.7
2,716,809	+		GFF2694	0.76	-0.5
2,716,809	+		GFF2694	0.76	+0.1
2,716,809	+		GFF2694	0.76	+2.2
2,716,809	+		GFF2694	0.76	+0.9
2,716,817	-		GFF2694	0.79	-1.7
2,716,817	-		GFF2694	0.79	-0.0
2,716,817	-		GFF2694	0.79	-1.4
2,716,817	-		GFF2694	0.79	-0.6
2,716,817	-		GFF2694	0.79	-1.5
2,716,817	-		GFF2694	0.79	-1.5
2,716,827	-		GFF2694	0.82	-0.8
2,716,829	+		GFF2694	0.83	+0.3
2,716,837	-		GFF2694	0.86	-0.3
2,716,837	-		GFF2694	0.86	-1.2
2,716,847	+		GFF2694	0.90	-0.3
2,716,877	-				+1.0
2,716,914	+				-1.8
2,716,936	+				-0.8
2,716,941	+				+0.2
2,716,954	+				-1.0
2,716,954	+				+0.2
2,716,954	+				+0.2
2,716,962	-				-0.2
2,716,966	-				-1.3
2,716,968	+				-1.2
2,716,976	-				+0.1
2,716,982	+				+0.6
2,716,984	-				-0.0
2,716,990	-				-0.3
2,717,007	-				+1.7
2,717,041	+				+0.3
2,717,049	-				+0.2
2,717,053	-				-0.2
2,717,065	+				-0.4
2,717,069	+				+0.4
2,717,069	+				-0.3
2,717,069	+				-1.2
2,717,069	+				+1.4
2,717,069	+				+0.1
2,717,077	-				-0.3
2,717,077	-				-0.4
2,717,077	-				-1.0
2,717,077	-				+1.1
2,717,077	-				-0.3
2,717,077	-				-1.0
2,717,091	-				-0.0
2,717,100	+				-1.9
2,717,117	+				+0.4
2,717,132	+				-0.5
2,717,132	+				-1.3
2,717,132	+				-0.1
2,717,133	-				+1.8
2,717,133	-				+0.4
2,717,140	-				-0.5
2,717,140	-				-0.3
2,717,140	-				+0.2
2,717,142	+				-1.2
2,717,156	+				-0.4
2,717,158	+				-0.6
2,717,166	+				+0.4
2,717,166	-				+0.4
2,717,166	-				+1.1
2,717,166	-				-1.2
2,717,171	+				+0.1
2,717,179	-				-0.4
2,717,179	-				-1.6
2,717,179	-				+0.4
2,717,184	+				-2.2
2,717,185	+				+0.1
2,717,185	+				-0.9
2,717,192	-				-0.9
2,717,193	+				+0.5
2,717,203	+				-1.2
2,717,208	+				+1.1
2,717,217	+				+0.7
2,717,225	-				-0.5
2,717,233	-				-0.6
2,717,246	+				+0.4
2,717,261	-				-0.4
2,717,263	+				-2.0
2,717,269	-				+0.5
2,717,271	-				+0.8
2,717,318	+				+0.7
2,717,318	+				+0.8
2,717,318	+				-0.4
2,717,318	+				+0.8
2,717,319	+				-1.5
2,717,326	-				-1.0
2,717,326	-				-1.0
2,717,326	-				+0.5
2,717,326	-				+0.1
2,717,336	+				-1.7
2,717,336	+				+0.5
2,717,336	+				+0.4
2,717,336	+				-2.1
2,717,350	+				+1.1
2,717,350	+				-1.2
2,717,369	-				-1.5
2,717,369	-				-0.4
2,717,372	-				+0.1
2,717,413	-				+0.2
2,717,424	-				-1.7
2,717,449	+				+0.4
2,717,461	-				-2.8
2,717,506	+		GFF2695	0.11	+1.0
2,717,542	-		GFF2695	0.13	+0.7
2,717,552	+		GFF2695	0.14	-0.1
2,717,553	+		GFF2695	0.14	+0.5
2,717,567	+		GFF2695	0.15	+0.7
2,717,575	-		GFF2695	0.16	-0.9
2,717,587	+		GFF2695	0.17	+0.9
2,717,595	+		GFF2695	0.17	+1.3
2,717,595	+		GFF2695	0.17	-1.6
2,717,595	+		GFF2695	0.17	-0.3
2,717,597	-		GFF2695	0.18	+0.1
2,717,603	-		GFF2695	0.18	-1.7
2,717,603	-		GFF2695	0.18	-0.1
2,717,614	+		GFF2695	0.19	+0.4
2,717,614	+		GFF2695	0.19	-0.6
2,717,614	+		GFF2695	0.19	-0.7
2,717,622	-		GFF2695	0.20	-0.9
2,717,638	+		GFF2695	0.21	-1.3
2,717,646	+		GFF2695	0.21	-0.9
2,717,646	-		GFF2695	0.21	-0.3
2,717,668	+		GFF2695	0.23	-1.1
2,717,678	+		GFF2695	0.24	-1.8
2,717,686	-		GFF2695	0.24	-1.8
2,717,686	-		GFF2695	0.24	-1.9
2,717,686	-		GFF2695	0.24	+1.0
2,717,702	+		GFF2695	0.26	-0.4
2,717,704	+		GFF2695	0.26	-1.4
2,717,709	+		GFF2695	0.26	+0.1
2,717,718	-		GFF2695	0.27	+0.5
2,717,735	+		GFF2695	0.28	+0.8
2,717,736	-		GFF2695	0.28	-1.4
2,717,737	-		GFF2695	0.28	-1.1
2,717,737	-		GFF2695	0.28	+0.3
2,717,744	-		GFF2695	0.29	-0.4
2,717,744	-		GFF2695	0.29	-2.1
2,717,745	+		GFF2695	0.29	+0.6
2,717,749	+		GFF2695	0.29	-0.3
2,717,749	+		GFF2695	0.29	-0.3
2,717,780	+		GFF2695	0.32	-0.3
2,717,780	+		GFF2695	0.32	-1.9
2,717,782	+		GFF2695	0.32	-0.1
2,717,788	-		GFF2695	0.32	-0.5
2,717,788	-		GFF2695	0.32	+0.2
2,717,790	-		GFF2695	0.32	-0.5
2,717,790	-		GFF2695	0.32	-0.9
2,717,812	+		GFF2695	0.34	-0.6
2,717,822	+		GFF2695	0.35	+0.7
2,717,828	+		GFF2695	0.35	-0.9
2,717,830	+		GFF2695	0.35	-0.5
2,717,830	+		GFF2695	0.35	-1.4
2,717,838	-		GFF2695	0.36	+1.4
2,717,838	-		GFF2695	0.36	-1.2
2,717,855	-		GFF2695	0.37	-0.4
2,717,869	+		GFF2695	0.38	-0.8
2,717,871	+		GFF2695	0.39	-1.7
2,717,874	+		GFF2695	0.39	+1.3
2,717,874	+		GFF2695	0.39	+0.2
2,717,874	+		GFF2695	0.39	-0.8
2,717,882	-		GFF2695	0.39	-0.2
2,717,882	-		GFF2695	0.39	-1.4
2,717,892	+		GFF2695	0.40	-0.6
2,717,892	+		GFF2695	0.40	-0.6
2,717,894	+		GFF2695	0.40	-0.5
2,717,902	+		GFF2695	0.41	-1.8
2,717,908	+		GFF2695	0.41	+0.3
2,717,908	+		GFF2695	0.41	-0.8
2,717,916	-		GFF2695	0.42	-0.2
2,717,920	+		GFF2695	0.42	-0.4
2,717,954	+		GFF2695	0.45	-0.1
2,718,008	+		GFF2695	0.49	-0.0
2,718,008	+		GFF2695	0.49	-0.2
2,718,008	+		GFF2695	0.49	-2.0
2,718,008	+		GFF2695	0.49	+0.1
2,718,008	+		GFF2695	0.49	-1.9
2,718,013	+		GFF2695	0.50	-1.9
2,718,016	-		GFF2695	0.50	+0.6
2,718,023	+		GFF2695	0.50	+0.1
2,718,024	-		GFF2695	0.50	-0.3
2,718,043	-		GFF2695	0.52	+0.6
2,718,044	-		GFF2695	0.52	-1.2
2,718,049	+		GFF2695	0.52	-0.4
2,718,049	-		GFF2695	0.52	-1.4
2,718,049	-		GFF2695	0.52	-0.2
2,718,054	+		GFF2695	0.53	+1.9
2,718,055	+		GFF2695	0.53	-1.2
2,718,055	+		GFF2695	0.53	+1.1
2,718,055	+		GFF2695	0.53	+0.3
2,718,062	-		GFF2695	0.53	-1.0
2,718,062	-		GFF2695	0.53	-0.3
2,718,067	+		GFF2695	0.54	-2.5
2,718,074	-		GFF2695	0.54	-2.3
2,718,084	+		GFF2695	0.55	-1.1
2,718,094	+		GFF2695	0.56	+0.8
2,718,099	+		GFF2695	0.56	+0.8
2,718,099	+		GFF2695	0.56	-0.6
2,718,107	+		GFF2695	0.57	+0.9
2,718,107	-		GFF2695	0.57	-1.4
2,718,107	-		GFF2695	0.57	-2.2
2,718,107	-		GFF2695	0.57	-2.2
2,718,107	-		GFF2695	0.57	-0.3
2,718,107	-		GFF2695	0.57	+0.9
2,718,107	-		GFF2695	0.57	+0.6
2,718,148	+		GFF2695	0.60	+0.2
2,718,150	+		GFF2695	0.60	-0.7
2,718,161	+		GFF2695	0.61	+0.5
2,718,161	+		GFF2695	0.61	+0.4
2,718,161	+		GFF2695	0.61	+0.3
2,718,163	+		GFF2695	0.61	-0.2
2,718,169	-		GFF2695	0.61	+0.6
2,718,169	-		GFF2695	0.61	+0.2
2,718,169	-		GFF2695	0.61	-0.3
2,718,169	-		GFF2695	0.61	+1.5
2,718,169	-		GFF2695	0.61	+0.1
2,718,169	-		GFF2695	0.61	-0.5
2,718,177	+		GFF2695	0.62	-0.4
2,718,233	+		GFF2695	0.66	-0.9
2,718,240	+		GFF2695	0.67	+0.1
2,718,240	+		GFF2695	0.67	+0.7
2,718,271	-		GFF2695	0.69	+1.5
2,718,293	+		GFF2695	0.71	+1.9
2,718,330	-		GFF2695	0.74	-0.6
2,718,351	+		GFF2695	0.75	-0.5
2,718,351	-		GFF2695	0.75	-0.3
2,718,351	-		GFF2695	0.75	-0.9
2,718,358	+		GFF2695	0.76	-0.1
2,718,359	-		GFF2695	0.76	+0.7
2,718,359	-		GFF2695	0.76	-0.4
2,718,366	+		GFF2695	0.77	+0.3
2,718,366	+		GFF2695	0.77	+0.8
2,718,366	-		GFF2695	0.77	+0.9
2,718,367	+		GFF2695	0.77	+0.1
2,718,374	-		GFF2695	0.77	-0.1
2,718,374	-		GFF2695	0.77	-1.4
2,718,374	-		GFF2695	0.77	+0.2
2,718,374	-		GFF2695	0.77	-0.6
2,718,376	-		GFF2695	0.77	+1.2
2,718,381	+		GFF2695	0.78	+0.5
2,718,381	+		GFF2695	0.78	-1.3
2,718,381	+		GFF2695	0.78	+0.3
2,718,381	+		GFF2695	0.78	-0.6
2,718,386	+		GFF2695	0.78	+0.3
2,718,389	-		GFF2695	0.78	+0.6
2,718,389	-		GFF2695	0.78	+0.5
2,718,394	-		GFF2695	0.79	+0.8
2,718,429	-		GFF2695	0.81	+1.5
2,718,435	+		GFF2695	0.82	-0.6
2,718,437	+		GFF2695	0.82	-0.4
2,718,443	-		GFF2695	0.82	+0.9
2,718,445	-		GFF2695	0.83	+0.1
2,718,469	-		GFF2695	0.84	-2.2
2,718,476	+		GFF2695	0.85	+0.1
2,718,476	+		GFF2695	0.85	+1.0
2,718,503	-		GFF2695	0.87	-0.0
2,718,510	+		GFF2695	0.88	+0.9
2,718,510	+		GFF2695	0.88	+0.9
2,718,510	+		GFF2695	0.88	-0.1
2,718,510	+		GFF2695	0.88	-0.4
2,718,538	-		GFF2695	0.90	+0.1
2,718,551	-				-0.4
2,718,559	-				-0.5
2,718,564	+				-0.7
2,718,572	+				-0.2
2,718,579	+				+0.5
2,718,587	-				+1.0
2,718,590	+				-0.3
2,718,590	+				+0.3
2,718,598	-				+0.7
2,718,598	-				-1.2
2,718,598	-				-0.2
2,718,598	-				+0.5
2,718,610	+				-0.6
2,718,618	-				-0.0
2,718,655	+				+1.0
2,718,655	+				-1.3
2,718,655	+				-1.1
2,718,655	+				-0.2
2,718,663	-				+0.5
2,718,663	-				-1.2
2,718,690	-				+0.8
2,718,701	+				-1.6
2,718,701	+				-0.5
2,718,709	-				-1.5
2,718,709	-				-2.2
2,718,730	+				+0.1
2,718,740	+				-0.1
2,718,742	-				+0.1
2,718,767	+		GFF2696	0.10	-1.2
2,718,770	-		GFF2696	0.10	-1.1
2,718,770	-		GFF2696	0.10	-0.0
2,718,770	-		GFF2696	0.10	-0.2
2,718,775	-		GFF2696	0.11	+0.6
2,718,775	-		GFF2696	0.11	+0.3
2,718,790	-		GFF2696	0.12	+1.2
2,718,790	-		GFF2696	0.12	+0.4
2,718,803	-		GFF2696	0.14	-0.7
2,718,811	-		GFF2696	0.14	+0.5
2,718,866	+		GFF2696	0.19	-0.2
2,718,880	-		GFF2696	0.21	+1.2
2,718,885	-		GFF2696	0.21	+0.1
2,718,901	+		GFF2696	0.23	-0.2
2,718,911	+		GFF2696	0.24	-0.9
2,718,919	+		GFF2696	0.24	+0.2
2,718,919	+		GFF2696	0.24	-1.7
2,718,919	+		GFF2696	0.24	-0.6
2,718,921	+		GFF2696	0.25	+0.2
2,718,927	-		GFF2696	0.25	+1.1
2,718,928	+		GFF2696	0.25	+1.1
2,718,951	+		GFF2696	0.27	+0.6
2,718,964	+		GFF2696	0.29	-0.9
2,718,969	+		GFF2696	0.29	-0.5
2,718,969	+		GFF2696	0.29	+0.4
2,718,972	+		GFF2696	0.29	-1.6
2,718,972	-		GFF2696	0.29	-0.5
2,718,972	-		GFF2696	0.29	+0.6
2,718,977	-		GFF2696	0.30	-0.9
2,718,977	-		GFF2696	0.30	-0.1
2,718,977	-		GFF2696	0.30	-1.9
2,718,980	-		GFF2696	0.30	-0.4
2,718,980	-		GFF2696	0.30	+0.8
2,719,007	-		GFF2696	0.33	-1.9
2,719,023	+		GFF2696	0.34	+1.1
2,719,023	-		GFF2696	0.34	+0.5
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2,719,650	+				+1.0
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2,719,653	+				-0.6
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