Strain Fitness in Sphingobium sp. HT1-2 around GFF1433

Experiment: EMM_noCarbon with D-Glucose and Ammonium Sulfate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	EMM_noCarbon with D-Glucose and Ammonium Sulfate
1,461,623	-				-0.3
1,461,623	-				-1.7
1,461,625	+				-1.9
1,461,627	+				-0.2
1,461,627	+				+0.3
1,461,635	-				+0.8
1,461,661	+				-2.6
1,461,669	-				-2.4
1,461,669	-				-0.1
1,461,684	-				-0.3
1,461,698	+				-0.5
1,461,698	+				+0.7
1,461,703	+				+0.3
1,461,706	-				-0.4
1,461,706	-				-0.2
1,461,706	-				-0.5
1,461,706	-				-0.2
1,461,707	+				-1.5
1,461,711	-				+0.2
1,461,711	-				-0.3
1,461,713	+				-1.4
1,461,715	+				-1.2
1,461,715	+				-1.2
1,461,721	-		GFF1432	0.10	+0.8
1,461,764	-		GFF1432	0.15	+1.2
1,461,796	+		GFF1432	0.18	-2.1
1,461,812	+		GFF1432	0.20	-1.2
1,461,819	-		GFF1432	0.21	-0.1
1,461,822	+		GFF1432	0.21	+0.7
1,461,881	+		GFF1432	0.28	-0.4
1,461,889	-		GFF1432	0.29	-0.2
1,461,889	-		GFF1432	0.29	+1.2
1,461,935	+		GFF1432	0.34	-0.2
1,461,943	-		GFF1432	0.35	-1.1
1,461,945	-		GFF1432	0.35	-1.7
1,461,952	+		GFF1432	0.36	-2.5
1,461,952	+		GFF1432	0.36	-0.8
1,461,952	+		GFF1432	0.36	-0.3
1,461,960	-		GFF1432	0.37	-0.6
1,461,960	-		GFF1432	0.37	-0.1
1,461,963	-		GFF1432	0.37	-0.2
1,461,978	+		GFF1432	0.39	-1.3
1,461,986	-		GFF1432	0.40	-0.3
1,461,997	+		GFF1432	0.41	+0.3
1,462,005	-		GFF1432	0.42	+0.7
1,462,014	+		GFF1432	0.43	+1.6
1,462,014	+		GFF1432	0.43	-1.2
1,462,017	-		GFF1432	0.43	-0.1
1,462,018	+		GFF1432	0.43	-0.7
1,462,026	-		GFF1432	0.44	-1.1
1,462,047	-		GFF1432	0.46	+0.8
1,462,057	-		GFF1432	0.47	-0.2
1,462,062	-		GFF1432	0.48	-1.2
1,462,076	+		GFF1432	0.50	-0.2
1,462,077	+		GFF1432	0.50	-0.6
1,462,084	-		GFF1432	0.50	+0.5
1,462,086	-		GFF1432	0.51	-0.3
1,462,086	-		GFF1432	0.51	+0.3
1,462,107	-		GFF1432	0.53	-0.2
1,462,107	-		GFF1432	0.53	+0.2
1,462,111	-		GFF1432	0.53	+1.3
1,462,132	-		GFF1432	0.56	-0.8
1,462,175	+		GFF1432	0.61	-0.5
1,462,183	-		GFF1432	0.61	+0.1
1,462,190	+		GFF1432	0.62	-1.3
1,462,190	+		GFF1432	0.62	-0.3
1,462,190	+		GFF1432	0.62	-0.9
1,462,190	+		GFF1432	0.62	-0.1
1,462,190	+		GFF1432	0.62	-0.4
1,462,190	+		GFF1432	0.62	-2.1
1,462,190	+		GFF1432	0.62	-0.4
1,462,198	-		GFF1432	0.63	-1.0
1,462,198	-		GFF1432	0.63	+1.2
1,462,198	-		GFF1432	0.63	-1.4
1,462,198	-		GFF1432	0.63	-0.4
1,462,198	-		GFF1432	0.63	-1.2
1,462,198	-		GFF1432	0.63	-0.5
1,462,198	-		GFF1432	0.63	+0.9
1,462,213	-		GFF1432	0.65	-2.1
1,462,215	+		GFF1432	0.65	+0.3
1,462,220	+		GFF1432	0.66	-1.7
1,462,220	+		GFF1432	0.66	-2.2
1,462,220	+		GFF1432	0.66	-0.6
1,462,223	-		GFF1432	0.66	-0.7
1,462,238	-		GFF1432	0.68	-1.1
1,462,238	-		GFF1432	0.68	+1.6
1,462,238	-		GFF1432	0.68	+1.5
1,462,247	-		GFF1432	0.69	+0.2
1,462,263	+		GFF1432	0.70	+0.2
1,462,302	+		GFF1432	0.75	+0.2
1,462,305	-		GFF1432	0.75	-0.0
1,462,307	+		GFF1432	0.75	+0.9
1,462,307	+		GFF1432	0.75	-0.2
1,462,310	-		GFF1432	0.76	-0.6
1,462,312	+		GFF1432	0.76	+0.7
1,462,312	+		GFF1432	0.76	-2.9
1,462,312	+		GFF1432	0.76	+0.7
1,462,312	+		GFF1432	0.76	-0.5
1,462,312	+		GFF1432	0.76	-1.8
1,462,312	+		GFF1432	0.76	-0.0
1,462,312	+		GFF1432	0.76	-0.1
1,462,312	+		GFF1432	0.76	+1.1
1,462,312	+		GFF1432	0.76	+0.9
1,462,312	+		GFF1432	0.76	+1.0
1,462,312	+		GFF1432	0.76	-0.9
1,462,317	+		GFF1432	0.76	-0.0
1,462,317	+		GFF1432	0.76	-0.6
1,462,317	+		GFF1432	0.76	+0.6
1,462,317	+		GFF1432	0.76	+0.4
1,462,317	+		GFF1432	0.76	-1.7
1,462,317	+		GFF1432	0.76	-2.1
1,462,320	-		GFF1432	0.77	-1.2
1,462,320	-		GFF1432	0.77	-2.1
1,462,320	-		GFF1432	0.77	-1.2
1,462,320	-		GFF1432	0.77	+0.6
1,462,320	-		GFF1432	0.77	-0.6
1,462,320	-		GFF1432	0.77	+0.3
1,462,320	-		GFF1432	0.77	+1.3
1,462,320	-		GFF1432	0.77	+0.1
1,462,320	-		GFF1432	0.77	+0.1
1,462,320	-		GFF1432	0.77	+0.8
1,462,320	-		GFF1432	0.77	-0.5
1,462,320	-		GFF1432	0.77	+0.9
1,462,320	-		GFF1432	0.77	+1.4
1,462,325	-		GFF1432	0.77	-0.2
1,462,325	-		GFF1432	0.77	-1.2
1,462,325	-		GFF1432	0.77	-2.1
1,462,325	-		GFF1432	0.77	-0.4
1,462,330	-		GFF1432	0.78	+0.4
1,462,330	-		GFF1432	0.78	-2.2
1,462,330	-		GFF1432	0.78	+1.5
1,462,343	+		GFF1432	0.79	-0.6
1,462,359	+		GFF1432	0.81	-0.1
1,462,362	+		GFF1432	0.81	+0.1
1,462,384	+		GFF1432	0.84	-1.3
1,462,386	-		GFF1432	0.84	+0.2
1,462,392	-		GFF1432	0.85	-0.2
1,462,415	+		GFF1432	0.87	-1.4
1,462,427	+		GFF1432	0.89	-0.7
1,462,427	+		GFF1432	0.89	+0.1
1,462,427	+		GFF1432	0.89	+0.4
1,462,434	+		GFF1432	0.89	-0.0
1,462,458	+				+0.3
1,462,464	+				+0.2
1,462,466	-				+0.5
1,462,475	+				-0.8
1,462,483	-				-0.8
1,462,485	+				-0.9
1,462,497	+				-0.1
1,462,497	+				-0.3
1,462,528	-				-0.2
1,462,532	-				+0.4
1,462,532	-				-1.2
1,462,532	-				+1.2
1,462,553	-				-1.0
1,462,575	+				+1.4
1,462,575	+				-0.1
1,462,575	+				+1.5
1,462,575	+				-0.1
1,462,578	-				+0.6
1,462,583	-				+1.1
1,462,583	-				-0.8
1,462,583	-				+0.0
1,462,583	-				+0.2
1,462,583	-				-1.0
1,462,583	-				+0.1
1,462,583	-				-0.5
1,462,583	-				-0.3
1,462,651	-				-1.5
1,462,653	+				+1.2
1,462,653	+				+0.4
1,462,653	+				+1.2
1,462,654	+				+1.2
1,462,658	+				-0.1
1,462,661	-				+1.0
1,462,661	-				+0.8
1,462,663	+				-0.2
1,462,663	+				-1.1
1,462,666	-				+0.1
1,462,666	-				+0.6
1,462,671	-				+0.7
1,462,677	+				-0.2
1,462,749	-		GFF1433	0.13	-0.2
1,462,749	-		GFF1433	0.13	-0.7
1,462,749	-		GFF1433	0.13	+0.6
1,462,756	+		GFF1433	0.14	-0.7
1,462,756	+		GFF1433	0.14	+0.8
1,462,764	-		GFF1433	0.14	-2.3
1,462,764	-		GFF1433	0.14	+0.1
1,462,764	-		GFF1433	0.14	-0.9
1,462,775	+		GFF1433	0.15	-1.5
1,462,780	+		GFF1433	0.16	+0.5
1,462,802	+		GFF1433	0.18	-0.6
1,462,805	-		GFF1433	0.18	-2.0
1,462,805	-		GFF1433	0.18	+0.0
1,462,815	-		GFF1433	0.19	-0.1
1,462,853	+		GFF1433	0.23	+0.3
1,462,862	+		GFF1433	0.24	-1.0
1,462,868	+		GFF1433	0.25	+0.8
1,462,920	+		GFF1433	0.30	-1.6
1,462,936	+		GFF1433	0.31	+0.4
1,462,936	+		GFF1433	0.31	-0.9
1,462,944	-		GFF1433	0.32	-2.0
1,462,957	+		GFF1433	0.33	+0.1
1,462,962	+		GFF1433	0.34	+0.3
1,462,979	+		GFF1433	0.35	+0.9
1,462,987	-		GFF1433	0.36	+0.4
1,463,018	+		GFF1433	0.39	+0.7
1,463,023	-		GFF1433	0.40	+0.2
1,463,026	-		GFF1433	0.40	-0.7
1,463,045	-		GFF1433	0.42	+0.2
1,463,115	-		GFF1433	0.49	-0.2
1,463,147	+		GFF1433	0.52	-1.3
1,463,149	+		GFF1433	0.52	+0.3
1,463,164	-		GFF1433	0.54	+0.3
1,463,164	-		GFF1433	0.54	-0.4
1,463,198	+		GFF1433	0.57	-0.5
1,463,233	+		GFF1433	0.60	+0.2
1,463,252	+		GFF1433	0.62	+0.9
1,463,335	+		GFF1433	0.71	-0.3
1,463,335	+		GFF1433	0.71	+0.4
1,463,335	+		GFF1433	0.71	-1.2
1,463,335	+		GFF1433	0.71	-1.8
1,463,335	+		GFF1433	0.71	-0.8
1,463,337	-		GFF1433	0.71	-2.3
1,463,343	-		GFF1433	0.71	-1.4
1,463,343	-		GFF1433	0.71	-2.3
1,463,344	-		GFF1433	0.71	-1.2
1,463,388	+		GFF1433	0.76	-1.5
1,463,395	+		GFF1433	0.76	-1.2
1,463,403	-		GFF1433	0.77	-1.2
1,463,457	-		GFF1433	0.82	+0.4
1,463,482	-		GFF1433	0.85	-2.6
1,463,482	-		GFF1433	0.85	-0.2
1,463,484	+		GFF1433	0.85	-0.1
1,463,484	+		GFF1433	0.85	-0.1
1,463,492	-		GFF1433	0.86	+0.4
1,463,492	-		GFF1433	0.86	+0.4
1,463,492	-		GFF1433	0.86	+0.4
1,463,611	+				+0.3
1,463,619	-				-0.4
1,463,648	-				-0.2
1,463,665	-				+0.3
1,463,667	+				+0.9
1,463,672	+				-0.4
1,463,677	+				-0.6
1,463,685	-				+0.5
1,463,687	+				-1.2
1,463,687	-				-2.1
1,463,692	+				+0.8
1,463,692	+				-1.3
1,463,692	+				-0.6
1,463,695	-				+0.7
1,463,700	-				+0.6
1,463,705	-				+0.3
1,463,717	-				+1.0
1,463,725	+				-1.1
1,463,725	+				-0.0
1,463,725	+				-0.1
1,463,725	+				-1.7
1,463,725	+				-0.2
1,463,725	+				+0.9
1,463,725	+				+0.6
1,463,725	+				-1.4
1,463,725	+				-2.2
1,463,733	-				-0.7
1,463,733	-				-0.1
1,463,733	-				-0.8
1,463,733	-				-1.9
1,463,733	-				+0.3
1,463,733	-				-1.9
1,463,733	-				-0.7
1,463,771	-				-1.0
1,463,771	-				+1.1
1,463,775	-		GFF1434	0.10	+0.7
1,463,782	+		GFF1434	0.11	-1.0
1,463,806	+		GFF1434	0.14	-0.6
1,463,811	+		GFF1434	0.14	-1.9
1,463,819	+		GFF1434	0.15	-0.9
1,463,833	+		GFF1434	0.17	+0.3
1,463,858	-		GFF1434	0.20	+1.4
1,463,858	-		GFF1434	0.20	-0.3
1,463,884	-		GFF1434	0.23	+0.4
1,463,886	+		GFF1434	0.23	-0.8
1,463,886	+		GFF1434	0.23	+0.6
1,463,886	+		GFF1434	0.23	-0.5
1,463,886	+		GFF1434	0.23	+0.4
1,463,894	-		GFF1434	0.24	-0.2
1,463,894	-		GFF1434	0.24	-0.4
1,463,894	-		GFF1434	0.24	-0.4
1,463,894	-		GFF1434	0.24	-1.3
1,463,894	-		GFF1434	0.24	+0.9
1,463,894	-		GFF1434	0.24	-1.6
1,463,894	-		GFF1434	0.24	-1.9
1,463,894	-		GFF1434	0.24	-0.2
1,463,914	+		GFF1434	0.26	+0.3
1,463,922	-		GFF1434	0.27	-0.5
1,463,922	-		GFF1434	0.27	+1.2
1,463,935	+		GFF1434	0.29	+0.4
1,463,943	-		GFF1434	0.29	-0.4
1,463,943	-		GFF1434	0.29	-0.4
1,463,974	+		GFF1434	0.33	-1.3
1,463,984	+		GFF1434	0.34	-0.1
1,463,984	+		GFF1434	0.34	+0.1
1,463,986	+		GFF1434	0.34	+0.1
1,463,986	+		GFF1434	0.34	-0.0
1,463,986	+		GFF1434	0.34	-0.8
1,463,992	-		GFF1434	0.35	-2.3
1,463,994	-		GFF1434	0.35	-2.0
1,463,994	-		GFF1434	0.35	-0.3
1,464,009	-		GFF1434	0.37	-0.2
1,464,047	+		GFF1434	0.41	+0.4
1,464,065	+		GFF1434	0.43	-0.1
1,464,065	+		GFF1434	0.43	+1.3
1,464,065	+		GFF1434	0.43	-0.3
1,464,065	+		GFF1434	0.43	+0.4
1,464,065	+		GFF1434	0.43	-0.2
1,464,073	-		GFF1434	0.44	+0.7
1,464,073	-		GFF1434	0.44	-0.9
1,464,093	+		GFF1434	0.47	-1.4
1,464,106	+		GFF1434	0.48	+0.9
1,464,117	+		GFF1434	0.49	+0.2
1,464,125	-		GFF1434	0.50	+1.6
1,464,147	-		GFF1434	0.53	-1.8
1,464,169	-		GFF1434	0.55	-2.4
1,464,205	-		GFF1434	0.60	-0.7
1,464,206	-		GFF1434	0.60	+0.7
1,464,216	+		GFF1434	0.61	+0.1
1,464,224	-		GFF1434	0.62	+0.9
1,464,226	-		GFF1434	0.62	+0.5
1,464,264	+		GFF1434	0.66	-0.4
1,464,274	-		GFF1434	0.67	-0.9
1,464,293	+		GFF1434	0.70	+0.5
1,464,294	+		GFF1434	0.70	-1.7
1,464,313	+		GFF1434	0.72	-1.3
1,464,321	+		GFF1434	0.73	+0.3
1,464,321	+		GFF1434	0.73	+0.6
1,464,321	+		GFF1434	0.73	+0.9
1,464,326	+		GFF1434	0.73	+0.0
1,464,329	-		GFF1434	0.74	-1.2
1,464,372	+		GFF1434	0.79	+0.3
1,464,419	+		GFF1434	0.84	-1.2
1,464,425	-		GFF1434	0.85	-1.4
1,464,479	+				+0.5
1,464,479	+				-1.9
1,464,479	+				+0.3
1,464,479	+				-0.4
1,464,479	+				-0.8
1,464,484	+				+0.7
1,464,487	-				+0.3
1,464,487	-				-0.8
1,464,487	-				-1.6
1,464,540	+				-1.5
1,464,542	+				+0.3
1,464,550	-				+0.8
1,464,550	-				-0.5
1,464,569	+				-0.7
1,464,593	-				+0.3
1,464,595	+				-0.1
1,464,595	+				+0.3
1,464,603	-				-0.8
1,464,603	-				-2.4
1,464,607	+				-0.1
1,464,615	-				-0.9
1,464,616	+				-1.9
1,464,634	+				-2.4