Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05949

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
93,008	+				-0.4
93,009	-				-0.9
93,009	-				-0.9
93,009	-				+0.4
93,070	+				-0.1
93,091	+				+0.7
93,091	+				-1.9
93,108	+				-0.2
93,108	+				-0.4
93,108	+				-0.4
93,108	+				-2.6
93,108	+				-0.9
93,109	-				-0.3
93,109	-				+1.1
93,132	+				-0.1
93,132	+				-0.0
93,132	+				-1.6
93,132	+				+0.7
93,132	+				-0.7
93,132	+				-0.4
93,132	+				-0.5
93,132	+				-0.0
93,133	-				-0.5
93,133	-				-2.1
93,133	-				-0.3
93,133	-				-0.5
93,133	-				-1.5
93,141	+				-0.0
93,141	+				-1.0
93,581	-		MPMX19_05948	0.64	+0.3
93,581	-		MPMX19_05948	0.64	-1.5
93,581	-		MPMX19_05948	0.64	+1.7
93,694	+		MPMX19_05948	0.88	-2.6
93,694	+		MPMX19_05948	0.88	-1.0
93,694	+		MPMX19_05948	0.88	+0.7
93,694	+		MPMX19_05948	0.88	+0.4
93,694	+		MPMX19_05948	0.88	+0.4
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-0.3
93,694	+		MPMX19_05948	0.88	-0.6
93,694	+		MPMX19_05948	0.88	+0.2
93,694	+		MPMX19_05948	0.88	-2.0
93,694	+		MPMX19_05948	0.88	-0.6
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	+0.1
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	-0.6
93,694	+		MPMX19_05948	0.88	-1.1
93,694	+		MPMX19_05948	0.88	+0.0
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	+0.2
93,694	+		MPMX19_05948	0.88	-1.4
93,694	+		MPMX19_05948	0.88	-0.3
93,694	+		MPMX19_05948	0.88	+1.4
93,694	+		MPMX19_05948	0.88	-2.0
93,694	+		MPMX19_05948	0.88	-0.6
93,694	+		MPMX19_05948	0.88	-1.6
93,694	+		MPMX19_05948	0.88	+0.7
93,694	+		MPMX19_05948	0.88	-0.4
93,694	+		MPMX19_05948	0.88	-1.0
93,694	+		MPMX19_05948	0.88	-0.5
93,694	+		MPMX19_05948	0.88	+0.4
93,694	+		MPMX19_05948	0.88	+1.4
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	+0.3
93,694	+		MPMX19_05948	0.88	-1.4
93,694	+		MPMX19_05948	0.88	-0.7
93,694	+		MPMX19_05948	0.88	-0.3
93,695	-		MPMX19_05948	0.89	-1.3
93,695	-		MPMX19_05948	0.89	+0.2
93,695	-		MPMX19_05948	0.89	-0.3
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.8
93,695	-		MPMX19_05948	0.89	+0.0
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-0.6
93,695	-		MPMX19_05948	0.89	-1.8
93,695	-		MPMX19_05948	0.89	-0.9
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	+0.4
93,695	-		MPMX19_05948	0.89	-0.3
93,695	-		MPMX19_05948	0.89	-0.5
93,695	-		MPMX19_05948	0.89	+0.1
93,695	-		MPMX19_05948	0.89	-0.8
93,695	-		MPMX19_05948	0.89	+0.3
93,695	-		MPMX19_05948	0.89	-0.4
93,695	-		MPMX19_05948	0.89	+0.6
93,695	-		MPMX19_05948	0.89	+0.2
93,695	-		MPMX19_05948	0.89	-0.6
93,695	-		MPMX19_05948	0.89	-0.1
93,695	-		MPMX19_05948	0.89	-0.6
93,695	-		MPMX19_05948	0.89	+1.2
93,695	-		MPMX19_05948	0.89	-1.3
93,695	-		MPMX19_05948	0.89	-0.6
93,695	-		MPMX19_05948	0.89	+0.7
93,695	-		MPMX19_05948	0.89	-1.0
93,695	-		MPMX19_05948	0.89	-0.7
93,695	-		MPMX19_05948	0.89	-1.8
93,695	-		MPMX19_05948	0.89	+0.5
94,126	+		MPMX19_05949	0.17	-1.3
94,126	+		MPMX19_05949	0.17	-1.2
94,126	+		MPMX19_05949	0.17	-2.0
94,127	-		MPMX19_05949	0.17	-1.9
94,127	-		MPMX19_05949	0.17	-0.2
94,127	-		MPMX19_05949	0.17	-0.2
94,127	-		MPMX19_05949	0.17	+1.5
94,127	-		MPMX19_05949	0.17	-1.6
94,201	-		MPMX19_05949	0.20	-1.4
94,201	-		MPMX19_05949	0.20	-0.3
94,201	-		MPMX19_05949	0.20	-1.8
94,201	-		MPMX19_05949	0.20	+0.1
94,201	-		MPMX19_05949	0.20	+0.1
94,399	+		MPMX19_05949	0.29	-0.4
94,399	+		MPMX19_05949	0.29	-0.6
94,399	+		MPMX19_05949	0.29	+1.3
94,399	+		MPMX19_05949	0.29	+1.9
94,399	+		MPMX19_05949	0.29	-0.6
94,399	+		MPMX19_05949	0.29	-0.4
94,399	+		MPMX19_05949	0.29	-0.4
94,399	+		MPMX19_05949	0.29	-0.3
94,399	+		MPMX19_05949	0.29	-0.2
94,399	+		MPMX19_05949	0.29	+0.7
94,399	+		MPMX19_05949	0.29	-0.2
94,399	+		MPMX19_05949	0.29	+1.1
94,399	+		MPMX19_05949	0.29	-0.9
94,399	+		MPMX19_05949	0.29	-1.1
94,399	+		MPMX19_05949	0.29	-3.2
94,399	+		MPMX19_05949	0.29	-0.7
94,399	+		MPMX19_05949	0.29	+0.5
94,399	+		MPMX19_05949	0.29	-0.2
94,399	+		MPMX19_05949	0.29	-0.0
94,399	+		MPMX19_05949	0.29	+0.0
94,399	+		MPMX19_05949	0.29	-0.3
94,399	+		MPMX19_05949	0.29	-0.3
94,399	+		MPMX19_05949	0.29	+1.2
94,399	+		MPMX19_05949	0.29	-0.6
94,399	+		MPMX19_05949	0.29	-0.6
94,400	-		MPMX19_05949	0.29	-0.9
94,400	-		MPMX19_05949	0.29	+1.4
94,400	-		MPMX19_05949	0.29	-1.1
94,400	-		MPMX19_05949	0.29	+0.7
94,400	-		MPMX19_05949	0.29	+1.7
94,400	-		MPMX19_05949	0.29	-1.0
94,400	-		MPMX19_05949	0.29	-0.5
94,400	-		MPMX19_05949	0.29	-0.4
94,400	-		MPMX19_05949	0.29	-1.5
94,400	-		MPMX19_05949	0.29	+0.2
94,400	-		MPMX19_05949	0.29	-0.7
94,400	-		MPMX19_05949	0.29	-0.3
94,400	-		MPMX19_05949	0.29	-0.0
94,400	-		MPMX19_05949	0.29	-0.3
94,400	-		MPMX19_05949	0.29	+0.0
94,400	-		MPMX19_05949	0.29	-1.2
94,400	-		MPMX19_05949	0.29	-0.1
94,400	-		MPMX19_05949	0.29	+2.0
94,400	-		MPMX19_05949	0.29	-0.6
94,400	-		MPMX19_05949	0.29	+0.6
94,400	-		MPMX19_05949	0.29	+0.1
94,400	-		MPMX19_05949	0.29	+0.7
94,400	-		MPMX19_05949	0.29	-0.6
94,400	-		MPMX19_05949	0.29	+1.5
94,400	-		MPMX19_05949	0.29	+1.1
94,400	-		MPMX19_05949	0.29	-1.5
94,400	-		MPMX19_05949	0.29	+0.6
94,400	-		MPMX19_05949	0.29	+0.0
94,542	+		MPMX19_05949	0.35	+0.3
94,542	+		MPMX19_05949	0.35	+0.0
94,543	-		MPMX19_05949	0.35	-1.8
94,727	-		MPMX19_05949	0.43	+0.1
94,846	+		MPMX19_05949	0.49	+0.1
94,847	-		MPMX19_05949	0.49	-1.5
94,847	-		MPMX19_05949	0.49	-1.3
95,053	+		MPMX19_05949	0.58	-0.9
95,053	+		MPMX19_05949	0.58	+0.5
95,053	+		MPMX19_05949	0.58	-0.1
95,053	+		MPMX19_05949	0.58	-0.9
95,053	+		MPMX19_05949	0.58	+1.0
95,054	-		MPMX19_05949	0.58	-2.0
95,054	-		MPMX19_05949	0.58	-0.2
95,054	-		MPMX19_05949	0.58	-0.9
95,054	-		MPMX19_05949	0.58	+0.3
95,054	-		MPMX19_05949	0.58	+1.0
95,054	-		MPMX19_05949	0.58	-2.4
95,054	-		MPMX19_05949	0.58	-0.1
95,086	+		MPMX19_05949	0.59	-0.9
95,087	-		MPMX19_05949	0.59	-2.3
95,087	-		MPMX19_05949	0.59	-0.0
95,320	+		MPMX19_05949	0.70	-1.9
95,320	+		MPMX19_05949	0.70	-0.0
95,320	+		MPMX19_05949	0.70	-0.3
95,321	-		MPMX19_05949	0.70	+0.6
95,413	+		MPMX19_05949	0.74	+0.3
95,413	+		MPMX19_05949	0.74	+0.4
95,413	+		MPMX19_05949	0.74	+0.5
95,413	+		MPMX19_05949	0.74	-0.2
95,414	-		MPMX19_05949	0.74	+0.5
95,414	-		MPMX19_05949	0.74	+0.5
95,414	-		MPMX19_05949	0.74	-0.5
95,414	-		MPMX19_05949	0.74	-0.8
95,414	-		MPMX19_05949	0.74	+0.7
95,414	-		MPMX19_05949	0.74	-0.2
95,414	-		MPMX19_05949	0.74	-0.3
95,414	-		MPMX19_05949	0.74	-0.1
95,608	+		MPMX19_05949	0.82	-1.1
95,608	+		MPMX19_05949	0.82	+0.4
95,608	+		MPMX19_05949	0.82	-0.9
95,608	+		MPMX19_05949	0.82	-0.3
95,608	+		MPMX19_05949	0.82	+0.7
95,608	+		MPMX19_05949	0.82	-0.9
95,608	+		MPMX19_05949	0.82	+0.5
95,608	+		MPMX19_05949	0.82	-2.0
95,608	+		MPMX19_05949	0.82	+0.1
95,608	+		MPMX19_05949	0.82	-0.8
95,608	+		MPMX19_05949	0.82	+0.0
95,608	+		MPMX19_05949	0.82	-1.3
95,608	+		MPMX19_05949	0.82	-0.5
95,608	+		MPMX19_05949	0.82	-0.9
95,608	+		MPMX19_05949	0.82	-1.1
95,608	+		MPMX19_05949	0.82	-0.6
95,608	+		MPMX19_05949	0.82	-0.8
95,608	+		MPMX19_05949	0.82	-0.4
95,608	+		MPMX19_05949	0.82	-0.1
95,608	+		MPMX19_05949	0.82	+0.7
95,608	+		MPMX19_05949	0.82	-0.3
95,608	+		MPMX19_05949	0.82	+0.1
95,608	+		MPMX19_05949	0.82	-0.0
95,608	+		MPMX19_05949	0.82	-1.2
95,608	+		MPMX19_05949	0.82	+0.3
95,608	+		MPMX19_05949	0.82	+0.1
95,608	+		MPMX19_05949	0.82	-0.4
95,608	+		MPMX19_05949	0.82	-1.4
95,608	+		MPMX19_05949	0.82	-0.5
95,609	-		MPMX19_05949	0.82	-0.6
95,609	-		MPMX19_05949	0.82	+0.3
95,609	-		MPMX19_05949	0.82	+1.9
95,609	-		MPMX19_05949	0.82	-0.5
95,609	-		MPMX19_05949	0.82	-0.9
95,609	-		MPMX19_05949	0.82	-1.1
95,609	-		MPMX19_05949	0.82	+0.0
95,609	-		MPMX19_05949	0.82	+1.7
95,609	-		MPMX19_05949	0.82	-0.5
95,609	-		MPMX19_05949	0.82	-0.5
95,609	-		MPMX19_05949	0.82	-1.8
95,609	-		MPMX19_05949	0.82	+0.2
95,609	-		MPMX19_05949	0.82	-1.1
95,609	-		MPMX19_05949	0.82	-0.6
95,609	-		MPMX19_05949	0.82	+1.4
95,609	-		MPMX19_05949	0.82	-0.2
95,609	-		MPMX19_05949	0.82	+0.6
95,609	-		MPMX19_05949	0.82	-0.9
95,609	-		MPMX19_05949	0.82	-0.4
95,609	-		MPMX19_05949	0.82	-1.3
95,609	-		MPMX19_05949	0.82	-0.6
95,609	-		MPMX19_05949	0.82	-0.3
95,609	-		MPMX19_05949	0.82	-1.4
95,609	-		MPMX19_05949	0.82	-0.0
95,609	-		MPMX19_05949	0.82	+1.0
95,609	-		MPMX19_05949	0.82	-1.3
95,609	-		MPMX19_05949	0.82	+1.3
95,609	-		MPMX19_05949	0.82	-0.5
95,609	-		MPMX19_05949	0.82	+1.0
95,609	-		MPMX19_05949	0.82	-0.5
95,818	+				-0.5
95,818	+				+0.2
95,818	+				-0.7
95,818	+				-0.0
95,818	+				+0.2
95,818	+				-1.0
95,818	+				-1.0
95,818	+				-0.3
95,818	+				+1.0
95,818	+				-0.0
95,818	+				-0.5
95,818	+				-1.9
95,818	+				-0.2
95,818	+				-0.5
95,818	+				-1.2
95,818	+				-1.8
95,818	+				+0.4
95,818	+				-0.1
95,818	+				-1.2
95,819	-				-0.3
95,819	-				-0.6
95,819	-				+0.1
95,819	-				-0.2
95,819	-				+0.2
95,819	-				+1.7
95,819	-				-0.5
95,819	-				+0.5
95,819	-				+0.8
95,819	-				-1.1
95,819	-				-2.1
95,819	-				+0.1
95,819	-				-0.7
95,819	-				+1.0
95,819	-				-0.9
95,819	-				-0.2
95,819	-				-0.2
95,819	-				+0.1
95,819	-				-0.2
95,819	-				+0.5
95,819	-				-0.6
95,819	-				+0.4
95,819	-				-1.4
96,004	+				-0.4
96,004	+				-1.5
96,004	+				+1.0
96,004	+				+0.9
96,004	+				-0.6
96,004	+				-0.6
96,004	+				+0.1
96,005	-				-0.4
96,005	-				-0.1
96,813	+		MPMX19_05950	0.30	-3.3
96,813	+		MPMX19_05950	0.30	-0.2
96,813	+		MPMX19_05950	0.30	+0.5
96,813	+		MPMX19_05950	0.30	+0.4
96,814	-		MPMX19_05950	0.31	+0.1
96,814	-		MPMX19_05950	0.31	-0.2
96,814	-		MPMX19_05950	0.31	-1.0
96,814	-		MPMX19_05950	0.31	-1.9
96,814	-		MPMX19_05950	0.31	+0.6
96,814	-		MPMX19_05950	0.31	-0.9
96,814	-		MPMX19_05950	0.31	-1.1
96,831	+		MPMX19_05950	0.34	-0.0
96,831	+		MPMX19_05950	0.34	-0.9
96,831	+		MPMX19_05950	0.34	-1.3
96,831	+		MPMX19_05950	0.34	-1.9
96,832	-		MPMX19_05950	0.34	-1.6
96,832	-		MPMX19_05950	0.34	-1.6
96,832	-		MPMX19_05950	0.34	-1.1
96,832	-		MPMX19_05950	0.34	-0.9
96,832	-		MPMX19_05950	0.34	+0.1
96,832	-		MPMX19_05950	0.34	-0.2
96,832	-		MPMX19_05950	0.34	-0.4
96,832	-		MPMX19_05950	0.34	-1.4
96,996	+		MPMX19_05950	0.62	-0.6