Experiment: NL-CCM, start OD=0.1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05543 and MPMX19_05544 overlap by 17 nucleotides MPMX19_05544 and MPMX19_05545 are separated by 545 nucleotides MPMX19_05545 and MPMX19_05546 are separated by 72 nucleotides
MPMX19_05543: MPMX19_05543 - Histidinol dehydrogenase, at 249,248 to 250,552
_05543
MPMX19_05544: MPMX19_05544 - ATP phosphoribosyltransferase, at 250,536 to 251,246
_05544
MPMX19_05545: MPMX19_05545 - hypothetical protein, at 251,792 to 251,992
_05545
MPMX19_05546: MPMX19_05546 - D-methionine-binding lipoprotein MetQ, at 252,065 to 252,844
_05546
Position (kb) 250
251
252 Strain fitness (log2 ratio) -2
-1
0
1 at 251.310 kb on - strand at 251.310 kb on - strand at 251.310 kb on - strand at 251.310 kb on - strand at 251.310 kb on - strand at 251.310 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.314 kb on - strand at 251.517 kb on + strand at 251.517 kb on + strand at 251.810 kb on + strand at 251.810 kb on + strand at 251.810 kb on + strand at 251.810 kb on + strand at 251.811 kb on - strand at 251.811 kb on - strand at 251.811 kb on - strand at 251.811 kb on - strand at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.960 kb on + strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 251.961 kb on - strand, within MPMX19_05545 at 252.073 kb on + strand at 252.073 kb on + strand at 252.074 kb on - strand at 252.074 kb on - strand at 252.074 kb on - strand at 252.168 kb on - strand, within MPMX19_05546
Per-strain Table
Position Strand Gene LocusTag Fraction NL-CCM, start OD=0.1 remove 251,310 - -1.6 251,310 - -1.4 251,310 - -0.9 251,310 - -0.3 251,310 - -1.9 251,310 - +0.5 251,314 - +0.3 251,314 - +1.7 251,314 - +0.6 251,314 - -1.4 251,314 - -1.6 251,314 - -1.9 251,314 - +0.4 251,314 - -0.3 251,314 - +1.0 251,314 - +0.1 251,314 - -0.2 251,314 - +0.6 251,314 - -0.1 251,517 + -0.1 251,517 + +0.0 251,810 + -1.2 251,810 + -0.4 251,810 + +1.5 251,810 + -1.4 251,811 - +0.1 251,811 - -0.3 251,811 - +1.6 251,811 - +0.6 251,960 + MPMX19_05545 0.84 -0.8 251,960 + MPMX19_05545 0.84 -0.3 251,960 + MPMX19_05545 0.84 -0.6 251,960 + MPMX19_05545 0.84 +0.2 251,960 + MPMX19_05545 0.84 -0.0 251,960 + MPMX19_05545 0.84 -0.3 251,960 + MPMX19_05545 0.84 -1.3 251,960 + MPMX19_05545 0.84 +0.1 251,961 - MPMX19_05545 0.84 -2.1 251,961 - MPMX19_05545 0.84 +1.0 251,961 - MPMX19_05545 0.84 -0.6 251,961 - MPMX19_05545 0.84 -0.7 251,961 - MPMX19_05545 0.84 -1.1 251,961 - MPMX19_05545 0.84 -0.0 251,961 - MPMX19_05545 0.84 -0.9 251,961 - MPMX19_05545 0.84 -2.1 251,961 - MPMX19_05545 0.84 +0.2 251,961 - MPMX19_05545 0.84 -0.9 251,961 - MPMX19_05545 0.84 +0.7 252,073 + +0.6 252,073 + +1.7 252,074 - -1.1 252,074 - -0.5 252,074 - +1.0 252,168 - MPMX19_05546 0.13 -1.1
Or see this region's nucleotide sequence