Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02023

Experiment: NL-CCM, start OD=0.1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM, start OD=0.1
2,112,033	+				+0.7
2,112,033	+				-0.5
2,112,033	+				+0.4
2,112,034	-				-0.8
2,112,211	+		MPMX19_02022	0.20	+0.9
2,112,211	+		MPMX19_02022	0.20	+0.3
2,112,211	+		MPMX19_02022	0.20	-0.6
2,112,211	+		MPMX19_02022	0.20	-1.1
2,112,211	+		MPMX19_02022	0.20	-0.2
2,112,212	-		MPMX19_02022	0.20	+0.1
2,112,212	-		MPMX19_02022	0.20	+0.4
2,112,445	+		MPMX19_02022	0.59	-0.1
2,112,445	+		MPMX19_02022	0.59	-0.1
2,112,445	+		MPMX19_02022	0.59	-0.4
2,112,445	+		MPMX19_02022	0.59	-1.1
2,112,445	+		MPMX19_02022	0.59	-0.7
2,112,446	-		MPMX19_02022	0.60	-1.7
2,112,446	-		MPMX19_02022	0.60	-0.9
2,112,446	-		MPMX19_02022	0.60	-2.0
2,112,446	-		MPMX19_02022	0.60	-1.1
2,112,446	-		MPMX19_02022	0.60	-0.5
2,112,446	-		MPMX19_02022	0.60	-0.7
2,112,446	-		MPMX19_02022	0.60	-2.0
2,112,446	-		MPMX19_02022	0.60	+0.1
2,112,446	-		MPMX19_02022	0.60	-0.9
2,112,532	+		MPMX19_02022	0.74	-0.9
2,112,532	+		MPMX19_02022	0.74	-0.5
2,112,600	+		MPMX19_02022	0.85	-1.7
2,112,600	+		MPMX19_02022	0.85	+1.3
2,112,601	-		MPMX19_02022	0.86	-1.0
2,112,810	+				+0.1
2,112,810	+				-1.1
2,112,810	+				-0.1
2,112,810	+				-0.3
2,112,810	+				+1.7
2,112,810	+				-0.3
2,112,810	+				+0.1
2,112,810	+				-0.2
2,112,810	+				+0.5
2,112,810	+				-0.4
2,112,810	+				-1.8
2,112,810	+				-1.5
2,112,810	+				-0.9
2,112,811	-				-0.9
2,112,811	-				-0.2
2,112,811	-				-0.1
2,112,811	-				+0.1
2,112,811	-				-0.3
2,112,811	-				-1.9
2,112,811	-				-0.3
2,112,811	-				-0.1
2,112,811	-				+0.2
2,112,811	-				-0.8
2,112,811	-				-2.5
2,112,811	-				-0.0
2,112,811	-				-1.1
2,112,832	+				-0.4
2,112,833	-				+0.9
2,112,883	+				-1.1
2,112,929	+				-0.3
2,112,929	+				-0.5
2,112,929	+				+0.1
2,112,929	+				+0.9
2,112,929	+				+0.1
2,112,929	+				-2.3
2,112,929	+				-0.0
2,112,930	-				-0.1
2,112,930	-				-2.5
2,113,043	+				-0.2
2,113,043	+				-0.1
2,113,043	+				-0.1
2,113,043	+				+0.5
2,113,043	+				-2.0
2,113,043	+				-0.3
2,113,043	+				+0.1
2,113,044	-				-0.8
2,113,044	-				-1.3
2,113,044	-				+0.5
2,113,044	-				+0.2
2,113,044	-				+0.1
2,113,044	-				-1.7
2,113,044	-				-1.4
2,113,044	-				-0.9
2,113,079	+				+0.7
2,113,079	+				-2.0
2,113,079	+				+0.3
2,113,079	+				-0.9
2,113,079	+				-0.1
2,113,080	-				-1.5
2,113,080	-				+0.1
2,113,080	-				+0.3
2,113,080	-				+0.7
2,113,080	-				-1.3
2,113,080	-				+0.4
2,113,080	-				+0.4
2,113,080	-				-0.8
2,113,080	-				-0.5
2,113,080	-				-0.5
2,113,080	-				-1.4
2,113,175	+		MPMX19_02023	0.12	+1.7
2,113,176	-		MPMX19_02023	0.12	+1.0
2,113,400	+		MPMX19_02023	0.24	+1.2
2,113,400	+		MPMX19_02023	0.24	+0.4
2,113,400	+		MPMX19_02023	0.24	-1.7
2,113,400	+		MPMX19_02023	0.24	-0.6
2,113,400	+		MPMX19_02023	0.24	-0.0
2,113,400	+		MPMX19_02023	0.24	+0.4
2,113,400	+		MPMX19_02023	0.24	-0.1
2,113,400	+		MPMX19_02023	0.24	-0.3
2,113,400	+		MPMX19_02023	0.24	-1.7
2,113,400	+		MPMX19_02023	0.24	-1.5
2,113,400	+		MPMX19_02023	0.24	-1.7
2,113,400	+		MPMX19_02023	0.24	+0.1
2,113,401	-		MPMX19_02023	0.24	-1.3
2,113,401	-		MPMX19_02023	0.24	-0.6
2,113,401	-		MPMX19_02023	0.24	-1.8
2,113,401	-		MPMX19_02023	0.24	+0.7
2,113,401	-		MPMX19_02023	0.24	+0.1
2,113,401	-		MPMX19_02023	0.24	-2.0
2,113,401	-		MPMX19_02023	0.24	+0.4
2,113,401	-		MPMX19_02023	0.24	+0.1
2,113,401	-		MPMX19_02023	0.24	-0.6
2,113,509	+		MPMX19_02023	0.29	+0.1
2,113,509	+		MPMX19_02023	0.29	-1.0
2,113,509	+		MPMX19_02023	0.29	-0.5
2,113,509	+		MPMX19_02023	0.29	+0.2
2,113,509	+		MPMX19_02023	0.29	+1.2
2,113,509	+		MPMX19_02023	0.29	-0.3
2,113,509	+		MPMX19_02023	0.29	-0.7
2,113,509	+		MPMX19_02023	0.29	-1.6
2,113,509	+		MPMX19_02023	0.29	+1.3
2,113,509	+		MPMX19_02023	0.29	+1.4
2,113,509	+		MPMX19_02023	0.29	-1.1
2,113,509	+		MPMX19_02023	0.29	-0.2
2,113,509	+		MPMX19_02023	0.29	-0.3
2,113,509	+		MPMX19_02023	0.29	-1.7
2,113,509	+		MPMX19_02023	0.29	-1.3
2,113,509	+		MPMX19_02023	0.29	-0.6
2,113,509	+		MPMX19_02023	0.29	+0.3
2,113,510	-		MPMX19_02023	0.29	-1.3
2,113,510	-		MPMX19_02023	0.29	+0.2
2,113,510	-		MPMX19_02023	0.29	-1.5
2,113,510	-		MPMX19_02023	0.29	+0.6
2,113,510	-		MPMX19_02023	0.29	+0.1
2,113,510	-		MPMX19_02023	0.29	+0.9
2,113,510	-		MPMX19_02023	0.29	-0.5
2,113,510	-		MPMX19_02023	0.29	-0.3
2,113,510	-		MPMX19_02023	0.29	-1.7
2,113,510	-		MPMX19_02023	0.29	+0.4
2,113,510	-		MPMX19_02023	0.29	-0.8
2,113,510	-		MPMX19_02023	0.29	-1.1
2,113,718	+		MPMX19_02023	0.40	+0.1
2,113,719	-		MPMX19_02023	0.40	+0.3
2,113,719	-		MPMX19_02023	0.40	-0.7
2,113,759	-		MPMX19_02023	0.42	+0.8
2,113,781	+		MPMX19_02023	0.43	-0.4
2,113,781	+		MPMX19_02023	0.43	+0.3
2,113,781	+		MPMX19_02023	0.43	-0.6
2,113,781	+		MPMX19_02023	0.43	+0.7
2,113,781	+		MPMX19_02023	0.43	+0.1
2,113,781	+		MPMX19_02023	0.43	-0.1
2,113,781	+		MPMX19_02023	0.43	+0.8
2,113,781	+		MPMX19_02023	0.43	+0.7
2,113,781	+		MPMX19_02023	0.43	-0.7
2,113,781	+		MPMX19_02023	0.43	+0.1
2,113,781	+		MPMX19_02023	0.43	-0.7
2,113,781	+		MPMX19_02023	0.43	-0.3
2,113,781	+		MPMX19_02023	0.43	+0.2
2,113,781	+		MPMX19_02023	0.43	-1.0
2,113,782	-		MPMX19_02023	0.43	-1.0
2,113,782	-		MPMX19_02023	0.43	-2.1
2,113,782	-		MPMX19_02023	0.43	+1.4
2,113,782	-		MPMX19_02023	0.43	-0.1
2,113,782	-		MPMX19_02023	0.43	+1.7
2,113,782	-		MPMX19_02023	0.43	-0.9
2,113,782	-		MPMX19_02023	0.43	-0.6
2,113,782	-		MPMX19_02023	0.43	-0.2
2,113,782	-		MPMX19_02023	0.43	-0.6
2,113,782	-		MPMX19_02023	0.43	-0.3
2,114,219	+		MPMX19_02023	0.65	+0.4
2,114,219	+		MPMX19_02023	0.65	-0.4
2,114,219	+		MPMX19_02023	0.65	+0.1
2,114,219	+		MPMX19_02023	0.65	-0.1
2,114,219	+		MPMX19_02023	0.65	-0.9
2,114,219	+		MPMX19_02023	0.65	-0.9
2,114,219	+		MPMX19_02023	0.65	+0.7
2,114,219	+		MPMX19_02023	0.65	-0.6
2,114,219	+		MPMX19_02023	0.65	-2.0
2,114,220	-		MPMX19_02023	0.65	-0.2
2,114,220	-		MPMX19_02023	0.65	+0.4
2,114,220	-		MPMX19_02023	0.65	-0.2
2,114,220	-		MPMX19_02023	0.65	+0.2
2,114,220	-		MPMX19_02023	0.65	-0.7
2,114,220	-		MPMX19_02023	0.65	+0.4
2,114,220	-		MPMX19_02023	0.65	+0.3
2,114,220	-		MPMX19_02023	0.65	-0.7
2,114,220	-		MPMX19_02023	0.65	-1.4
2,114,936	+				-1.0
2,114,936	+				+0.3
2,114,936	+				-0.3
2,114,937	-				-0.7
2,114,937	-				-0.8
2,114,937	-				+1.1
2,114,937	-				-0.5
2,114,951	-				-0.7
2,114,951	-				-0.4
2,114,951	-				-0.8
2,114,977	+				-1.0
2,114,977	+				+1.1
2,114,977	+				-0.6
2,114,977	+				-0.9
2,114,977	+				+0.5
2,114,977	+				-0.5
2,114,977	+				-0.4
2,114,977	+				-1.9
2,114,977	+				+1.2
2,114,977	+				-0.2
2,114,977	+				-0.1
2,114,977	+				-1.3
2,114,977	+				+0.2
2,114,977	+				-1.0
2,114,977	+				+0.1
2,114,977	+				-0.7
2,114,977	+				+0.4
2,114,977	+				+0.3
2,114,977	+				-0.3
2,114,977	+				+0.9
2,114,977	+				-2.0
2,114,977	+				+0.4
2,114,977	+				-0.6
2,114,978	-				+0.7
2,114,978	-				-1.0
2,114,978	-				-0.6
2,114,978	-				+0.2
2,114,978	-				-0.7
2,114,978	-				-1.5
2,114,978	-				+0.3
2,114,978	-				+0.1
2,114,978	-				-0.5
2,114,978	-				-0.6
2,114,978	-				-0.0
2,114,978	-				-1.2
2,114,978	-				+0.4
2,114,978	-				-0.3
2,114,978	-				+1.0
2,114,978	-				+0.1
2,114,978	-				+0.7
2,114,978	-				-1.5
2,114,978	-				-0.4
2,114,978	-				-0.3
2,114,978	-				-0.6
2,114,978	-				+0.6
2,114,978	-				-0.4
2,115,124	+		MPMX19_02024	0.14	+0.4
2,115,124	+		MPMX19_02024	0.14	+0.4
2,115,247	+		MPMX19_02024	0.24	-0.7
2,115,247	+		MPMX19_02024	0.24	-1.1
2,115,247	+		MPMX19_02024	0.24	+0.2
2,115,247	+		MPMX19_02024	0.24	-1.0
2,115,488	+		MPMX19_02024	0.45	+0.4
2,115,488	+		MPMX19_02024	0.45	-1.3
2,115,489	-		MPMX19_02024	0.45	-1.1
2,115,489	-		MPMX19_02024	0.45	+0.7
2,115,489	-		MPMX19_02024	0.45	-1.5
2,115,621	+		MPMX19_02024	0.56	-1.0
2,115,796	+		MPMX19_02024	0.71	-0.9
2,115,797	-		MPMX19_02024	0.71	-0.3
2,115,877	+		MPMX19_02024	0.78	-1.8
2,115,877	+		MPMX19_02024	0.78	+0.8
2,115,877	+		MPMX19_02024	0.78	+0.1
2,115,877	+		MPMX19_02024	0.78	+1.7
2,115,877	+		MPMX19_02024	0.78	-0.7
2,115,877	+		MPMX19_02024	0.78	+0.4
2,115,877	+		MPMX19_02024	0.78	-1.2
2,115,877	+		MPMX19_02024	0.78	-0.3
2,115,877	+		MPMX19_02024	0.78	-1.0
2,115,877	+		MPMX19_02024	0.78	-0.8
2,115,877	+		MPMX19_02024	0.78	-0.9
2,115,877	+		MPMX19_02024	0.78	-0.5
2,115,878	-		MPMX19_02024	0.78	-0.5
2,115,878	-		MPMX19_02024	0.78	+0.5
2,115,878	-		MPMX19_02024	0.78	+0.7
2,115,878	-		MPMX19_02024	0.78	+0.4
2,115,878	-		MPMX19_02024	0.78	+1.1
2,115,878	-		MPMX19_02024	0.78	-0.3
2,115,878	-		MPMX19_02024	0.78	+0.8
2,115,878	-		MPMX19_02024	0.78	-0.6
2,115,878	-		MPMX19_02024	0.78	-1.9
2,115,878	-		MPMX19_02024	0.78	+0.4
2,115,878	-		MPMX19_02024	0.78	-0.6
2,115,916	+		MPMX19_02024	0.81	-0.4
2,115,916	+		MPMX19_02024	0.81	-0.3
2,115,916	+		MPMX19_02024	0.81	+0.4
2,115,916	+		MPMX19_02024	0.81	-1.7